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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • plastid 2
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d042353_P003 Maize nucleus 95.37 95.55
Os01t0919400-01 Rice plasma membrane 86.03 85.79
TraesCS3B01G461800.1 Wheat nucleus 83.35 84.28
TraesCS3D01G420300.1 Wheat nucleus 83.26 84.03
TraesCS3A01G425500.1 Wheat nucleus 83.16 83.71
HORVU3Hr1G093830.2 Barley cytosol, nucleus 76.32 83.08
GSMUA_Achr4P16070_001 Banana nucleus 72.71 72.64
VIT_05s0029g01140.t01 Wine grape cytosol 69.66 70.57
Solyc09g092130.2.1 Tomato nucleus, unclear 68.64 69.74
PGSC0003DMT400067951 Potato nucleus 68.64 69.74
KRH14493 Soybean cytosol 67.44 68.58
Bra015364.1-P Field mustard cytosol 53.84 68.15
AT1G04920.1 Thale cress cytosol 66.79 67.98
CDX89776 Canola cytosol 66.79 67.86
CDY18270 Canola cytosol 66.79 67.79
KRG98934 Soybean cytosol 65.77 67.52
KRH46034 Soybean cytosol 65.49 67.11
OQU78428 Sorghum nucleus 53.38 53.93
KXG29640 Sorghum cytosol 47.36 53.11
KXG28137 Sorghum cytosol 51.71 52.24
KXG20466 Sorghum cytosol 45.61 50.31
KXG19528 Sorghum mitochondrion 16.28 21.95
EER92301 Sorghum cytosol 16.37 21.88
OQU92441 Sorghum cytosol 15.54 20.59
KXG31429 Sorghum cytosol 15.91 19.93
OQU77175 Sorghum plastid 16.0 19.29
Protein Annotations
KEGG:00500+2.4.1.14MapMan:3.1.2.7Gene3D:3.40.50.2000EntrezGene:8079789UniProt:C5XG93ncoils:Coil
EnsemblPlants:EES04111ProteinID:EES04111ProteinID:EES04111.1GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005975GO:GO:0005985
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016157GO:GO:0016740GO:GO:0016757
GO:GO:0046524InterPro:Glyco_trans_1PFAM:PF00534PFAM:PF00862PFAM:PF05116PANTHER:PTHR12526
PANTHER:PTHR12526:SF360MetaCyc:PWY-7238MetaCyc:PWY-7347EnsemblPlantsGene:SORBI_3003G403300InterPro:SPP_NInterPro:SPS_C
SUPFAM:SSF53756unigene:Sbi.5859InterPro:Sucrose_synthInterPro:SucrsPsyn_plnTIGRFAMs:TIGR02468UniParc:UPI0001A855B3
RefSeq:XP_002458991.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:-:71114880..71120454
Molecular Weight (calculated)
119358.0 Da
IEP (calculated)
6.654
GRAVY (calculated)
-0.386
Length
1081 amino acids
Sequence
(BLAST)
0001: MAGNEWINGY LEAILDSRTT AGGGGGGGGG GGGGDPRSPV AGASPTKAAS PRGPHMNFNP SHYFVEEVVK GVDESDLHRT WIKVVATRNA RERSTRLENM
0101: CWRIWHLARK KKQLELEGMQ RISARRKEQE QVRREATEDL AEDLDEGEKA DTLGELAPVE TAKKKFQRNF SDLTVWSDDN KEKKLYIVLI SVHGLVRGEN
0201: MELGRDSDTG GQVKYVVELA RAMSMMPGVY RVDLFTRQVS SPDVDWSYGE PTEMLCSGSN DGEGGESAGA YIVRIPCGPR DKYLKKEALW PYLQEFVDGA
0301: LAHILNMSKA LGEQVGNGKP VLPYVIHGHY ADAGDVAALL SGALNVPMVL TGHSLGRNKL EQLLKQGRMS KAEIDSTYKI MRRIEGEELS LDASELVITS
0401: TRQEIDEQWG LYDGFDVKLE KVLRARARRG VSCHGRFMPR MVVIPPGMDF SNVIPEDIDG DGDSKDDIVG LEVASPKSMP PIWAEVMRFL TNPHKPMILA
0501: LSRPDPKKNI TTLVKAFGEC RPLRELANLT LIMGNRDDID EMSAGNASVL TTVLKLIDKY DLYGSVAFPK HHNQADVPEI YRLAAKMKGV FINPALVEPF
0601: GLTLIEAAAH GLPIVATKNG GPVDITTALN NGLLVDPHDQ NAIADALLKL VADKNLWQEC RRNGLRNIHL YSWPEHCRTY LTRVAGCRLR NPRWLKDTPA
0701: DAGADDEEFL EDSMDAQDLS LRLSIDGEKS SLNTNDPLSS DPQDQVQKIM NKIKQSSALP PSMSSGGDGA KNAAEATGGT MNKYPLLRRR RRLFVIAVDC
0801: YEDDGRASKK MLQVIQEVFR AVRSDSQMSK ISGFALSTAM PLSETLQLLK LGKIPATDFD ALICGSGSEV YYPGTVNCID AEGKLRPDQD YLMHISHRWS
0901: HDGARQTIAK LMASQDGSDD AVELDVASSN AHCFAFLIKD PKKVKTVDEM RERLRMRGLR CHIMYCRNAT RLQVVPLLAS RSQALRYLFV RWGLSVGNMY
1001: LITGEHGDTD LEEMLSGLHK TVIVRGVTEK GSEALLRSSG SYKRDDVVPT ETPLAAYTTG ELKADEIMRA LKQVSKTSSG M
Best Arabidopsis Sequence Match ( AT1G04920.1 )
(BLAST)
0001: MAGNEWINGY LEAILDSQAQ GIEETQQKPQ ASVNLREGDG QYFNPTKYFV EEVVTGVDET DLHRTWLKVV ATRNSRERNS RLENMCWRIW HLTRKKKQLE
0101: WEDSQRIANR RLEREQGRRD ATEDLSEDLS EGEKGDGLGE IVQPETPRRQ LQRNLSNLEI WSDDKKENRL YVVLISLHGL VRGENMELGS DSDTGGQVKY
0201: VVELARALAR MPGVYRVDLF TRQICSSEVD WSYAEPTEML TTAEDCDGDE TGESSGAYII RIPFGPRDKY LNKEILWPFV QEFVDGALAH ILNMSKVLGE
0301: QIGKGKPVWP YVIHGHYADA GDSAALLSGA LNVPMVLTGH SLGRNKLEQL LKQGRQSKED INSTYKIKRR IEAEELSLDA AELVITSTRQ EIDEQWGLYD
0401: GFDVKLEKVL RARARRGVNC HGRFMPRMAV IPPGMDFTNV EVQEDTPEGD GDLASLVGGT EGSSPKAVPT IWSEVMRFFT NPHKPMILAL SRPDPKKNIT
0501: TLLKAFGECR PLRELANLTL IMGNRDDIDE LSSGNASVLT TVLKLIDKYD LYGSVAYPKH HKQSDVPDIY RLAANTKGVF INPALVEPFG LTLIEAAAHG
0601: LPMVATKNGG PVDIHRALHN GLLVDPHDQE AIANALLKLV SEKNLWHECR INGWKNIHLF SWPEHCRTYL TRIAACRMRH PQWQTDADEV AAQDDEFSLN
0701: DSLKDVQDMS LRLSMDGDKP SLNGSLEPNS ADPVKQIMSR MRTPEIKSKP ELQGKKQSDN LGSKYPVLRR RERLVVLAVD CYDNEGAPDE KAMVPMIQNI
0801: IKAVRSDPQM AKNSGFAIST SMPLDELTRF LKSAKIQVSE FDTLICSSGS EVYYPGGEEG KLLPDPDYSS HIDYRWGMEG LKNTVWKLMN TTAVGGEARN
0901: KGSPSLIQED QASSNSHCVA YMIKDRSKVM RVDDLRQKLR LRGLRCHPMY CRNSTRMQIV PLLASRSQAL RYLFVRWRLN VANMYVVVGD RGDTDYEELI
1001: SGTHKTVIVK GLVTLGSDAL LRSTDLRDDI VPSESPFIGF LKVDSPVKEI TDIFKQLSKA TA
Arabidopsis Description
SPS3SPS3F [Source:UniProtKB/TrEMBL;Acc:A0A178WKI5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.