Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G420300.1 | Wheat | nucleus | 98.79 | 99.07 |
| TraesCS3B01G461800.1 | Wheat | nucleus | 97.77 | 98.22 |
| HORVU3Hr1G093830.2 | Barley | cytosol, nucleus | 85.85 | 92.85 |
| EES04111 | Sorghum | nucleus | 83.71 | 83.16 |
| Zm00001d012036_P001 | Maize | nucleus | 82.68 | 83.15 |
| Os01t0919400-01 | Rice | plasma membrane | 83.52 | 82.75 |
| Zm00001d042353_P003 | Maize | nucleus | 82.77 | 82.39 |
| GSMUA_Achr4P16070_001 | Banana | nucleus | 71.51 | 70.98 |
| VIT_05s0029g01140.t01 | Wine grape | cytosol | 67.88 | 68.32 |
| PGSC0003DMT400067951 | Potato | nucleus | 67.23 | 67.86 |
| Solyc09g092130.2.1 | Tomato | nucleus, unclear | 67.23 | 67.86 |
| KRH14493 | Soybean | cytosol | 65.92 | 66.6 |
| AT1G04920.1 | Thale cress | cytosol | 65.18 | 65.91 |
| KRH46034 | Soybean | cytosol | 64.71 | 65.88 |
| KRG98934 | Soybean | cytosol | 64.53 | 65.81 |
| CDX89776 | Canola | cytosol | 64.99 | 65.6 |
| CDY18270 | Canola | cytosol | 64.99 | 65.54 |
| Bra015364.1-P | Field mustard | cytosol | 51.77 | 65.11 |
| TraesCS3A01G015500.1 | Wheat | golgi | 52.14 | 52.29 |
| TraesCS4A01G225100.1 | Wheat | cytosol | 51.3 | 52.08 |
| TraesCS6A01G144800.1 | Wheat | cytoskeleton, cytosol, nucleus | 45.53 | 50.73 |
| TraesCS7A01G518200.1 | Wheat | cytosol | 45.44 | 50.21 |
| TraesCS4A01G492600.1 | Wheat | cytosol | 12.85 | 24.64 |
| TraesCS4A01G140000.1 | Wheat | cytosol, golgi, unclear | 16.2 | 21.51 |
| TraesCS7A01G158900.1 | Wheat | golgi, nucleus | 15.74 | 20.92 |
| TraesCS4A01G446700.1 | Wheat | cytosol | 15.55 | 20.49 |
| TraesCS7A01G040900.2 | Wheat | cytosol | 15.55 | 20.49 |
| TraesCS2A01G168200.1 | Wheat | golgi, unclear | 15.64 | 20.22 |
| TraesCS7A01G557600.1 | Wheat | cytosol | 16.11 | 20.09 |
| TraesCS2A01G406700.1 | Wheat | cytosol | 15.92 | 19.79 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.1000 | Gene3D:3.40.50.2000 | Gene3D:3.90.1070.10 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005985 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016157 | GO:GO:0016740 | GO:GO:0046524 | InterPro:Glyco_trans_1 | InterPro:HAD_sf |
| InterPro:IPR023214 | PFAM:PF00534 | PFAM:PF00862 | PFAM:PF05116 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF360 |
| InterPro:SPP_N | InterPro:SPS_C | SUPFAM:SSF53756 | InterPro:Sucrose_synth | InterPro:SucrsPsyn_pln | TIGRFAMs:TIGR02468 |
| EnsemblPlantsGene:TraesCS3A01G425500 | EnsemblPlants:TraesCS3A01G425500.1 | TIGR:cd03800 | TIGR:cd16419 | SEG:seg | : |
Description
No Description!
Coordinates
chr3A:-:667793453..667799373
Molecular Weight (calculated)
118273.0 Da
IEP (calculated)
6.716
GRAVY (calculated)
-0.421
Length
1074 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGNEWINGY LEAILDSGAS GGGGGGGGGS GAGAGGGGGG GGGGDPKSSS SPRGPHTIFN PTTYFVEEVV KGVDESDLHR TWIKVVATRN ARERSSRLEN
0101: MCWRIWHLAR KKKQLEIEGI QRMSARQNEQ EKVRREATED LSEDLDEGEK GDIVGELMPS GTPKKKFQRN FSDLSVWSDE NKEKKLYIVL ISVHGLVRGE
0201: NMELGSDSDT GGQVKYVVEL ARALAMMPGV YRVDLFTRQV SSPDVDWSYG EPTEMLTSGS HDAEGSGESG GAYIVRIPCG QSNKYIKKES LWPYLQEFVD
0301: GALAHILNMS KVLGEQVGHG KPVLPYVIHG HYADAGDVAA LLSGALNVPM VLTGHSLGRN KLEQIMMQGR MSKEEIDATY KIMRRIEGEE LALDAAELVI
0401: TSTRQEIDEQ WGLYDGFDVK LEKVLRARTR RGLSCHGRFM PRMMVIPPGM DFSNVVVQDI DGDGDKDDIN LDAASPRSLP PIWAEVMRFL TNPHKPMILA
0501: LSRPDPKKNI TTLVKAFGEC RPLRELANLV LIMGNRDDIE EMPPGNANVL TTVLKLVDKY DLYGSVAFPK HHKQADVPEI YRLTAKTKGV FINPALVEPF
0601: GLTLIEAAAH GLPIVATKNG GPVDITNTLN SGLLVDPHDQ NAIADALLKL VADKNLWHEC RKNGLRNIHL YSWPEHCRTY LARVAGCRIR NPRWLKDTPA
0701: DAGADDEAED SLMEFQDLSL RLSIDGERGS TNEPASSDPQ DQVQKIMNKL HQSSSAAPDA ATDKNPANVH AAGTVNKYPL LRRRRRLFIV AVDCYGDDGR
0801: SSKKMLQVIQ EVFRAVRSDT QLSKISGFAL STAMPLSETL QLLQTGKVPP TDFDALICGS GSEVYYPGSA QCLDAQGKLR PDQDYLQHIN HRWSHDGARQ
0901: TIGKLMASQD GSGSVVEPDV ESCNAHCVSF FVRDPKKVRT IDEMRERLRM RGLRCHLMYC RKSTRMQVVP LMASRSQALR YLFVRWGLPV GNMYIVLGEH
1001: GDTDREEMLS GLHKTVIVKG VTEKGSEDLL RSSGSYHKED VVPSDSPLAT TTRGDLKSDE ILRALKEVSK ASSG
0101: MCWRIWHLAR KKKQLEIEGI QRMSARQNEQ EKVRREATED LSEDLDEGEK GDIVGELMPS GTPKKKFQRN FSDLSVWSDE NKEKKLYIVL ISVHGLVRGE
0201: NMELGSDSDT GGQVKYVVEL ARALAMMPGV YRVDLFTRQV SSPDVDWSYG EPTEMLTSGS HDAEGSGESG GAYIVRIPCG QSNKYIKKES LWPYLQEFVD
0301: GALAHILNMS KVLGEQVGHG KPVLPYVIHG HYADAGDVAA LLSGALNVPM VLTGHSLGRN KLEQIMMQGR MSKEEIDATY KIMRRIEGEE LALDAAELVI
0401: TSTRQEIDEQ WGLYDGFDVK LEKVLRARTR RGLSCHGRFM PRMMVIPPGM DFSNVVVQDI DGDGDKDDIN LDAASPRSLP PIWAEVMRFL TNPHKPMILA
0501: LSRPDPKKNI TTLVKAFGEC RPLRELANLV LIMGNRDDIE EMPPGNANVL TTVLKLVDKY DLYGSVAFPK HHKQADVPEI YRLTAKTKGV FINPALVEPF
0601: GLTLIEAAAH GLPIVATKNG GPVDITNTLN SGLLVDPHDQ NAIADALLKL VADKNLWHEC RKNGLRNIHL YSWPEHCRTY LARVAGCRIR NPRWLKDTPA
0701: DAGADDEAED SLMEFQDLSL RLSIDGERGS TNEPASSDPQ DQVQKIMNKL HQSSSAAPDA ATDKNPANVH AAGTVNKYPL LRRRRRLFIV AVDCYGDDGR
0801: SSKKMLQVIQ EVFRAVRSDT QLSKISGFAL STAMPLSETL QLLQTGKVPP TDFDALICGS GSEVYYPGSA QCLDAQGKLR PDQDYLQHIN HRWSHDGARQ
0901: TIGKLMASQD GSGSVVEPDV ESCNAHCVSF FVRDPKKVRT IDEMRERLRM RGLRCHLMYC RKSTRMQVVP LMASRSQALR YLFVRWGLPV GNMYIVLGEH
1001: GDTDREEMLS GLHKTVIVKG VTEKGSEDLL RSSGSYHKED VVPSDSPLAT TTRGDLKSDE ILRALKEVSK ASSG
0001: MAGNEWINGY LEAILDSQAQ GIEETQQKPQ ASVNLREGDG QYFNPTKYFV EEVVTGVDET DLHRTWLKVV ATRNSRERNS RLENMCWRIW HLTRKKKQLE
0101: WEDSQRIANR RLEREQGRRD ATEDLSEDLS EGEKGDGLGE IVQPETPRRQ LQRNLSNLEI WSDDKKENRL YVVLISLHGL VRGENMELGS DSDTGGQVKY
0201: VVELARALAR MPGVYRVDLF TRQICSSEVD WSYAEPTEML TTAEDCDGDE TGESSGAYII RIPFGPRDKY LNKEILWPFV QEFVDGALAH ILNMSKVLGE
0301: QIGKGKPVWP YVIHGHYADA GDSAALLSGA LNVPMVLTGH SLGRNKLEQL LKQGRQSKED INSTYKIKRR IEAEELSLDA AELVITSTRQ EIDEQWGLYD
0401: GFDVKLEKVL RARARRGVNC HGRFMPRMAV IPPGMDFTNV EVQEDTPEGD GDLASLVGGT EGSSPKAVPT IWSEVMRFFT NPHKPMILAL SRPDPKKNIT
0501: TLLKAFGECR PLRELANLTL IMGNRDDIDE LSSGNASVLT TVLKLIDKYD LYGSVAYPKH HKQSDVPDIY RLAANTKGVF INPALVEPFG LTLIEAAAHG
0601: LPMVATKNGG PVDIHRALHN GLLVDPHDQE AIANALLKLV SEKNLWHECR INGWKNIHLF SWPEHCRTYL TRIAACRMRH PQWQTDADEV AAQDDEFSLN
0701: DSLKDVQDMS LRLSMDGDKP SLNGSLEPNS ADPVKQIMSR MRTPEIKSKP ELQGKKQSDN LGSKYPVLRR RERLVVLAVD CYDNEGAPDE KAMVPMIQNI
0801: IKAVRSDPQM AKNSGFAIST SMPLDELTRF LKSAKIQVSE FDTLICSSGS EVYYPGGEEG KLLPDPDYSS HIDYRWGMEG LKNTVWKLMN TTAVGGEARN
0901: KGSPSLIQED QASSNSHCVA YMIKDRSKVM RVDDLRQKLR LRGLRCHPMY CRNSTRMQIV PLLASRSQAL RYLFVRWRLN VANMYVVVGD RGDTDYEELI
1001: SGTHKTVIVK GLVTLGSDAL LRSTDLRDDI VPSESPFIGF LKVDSPVKEI TDIFKQLSKA TA
0101: WEDSQRIANR RLEREQGRRD ATEDLSEDLS EGEKGDGLGE IVQPETPRRQ LQRNLSNLEI WSDDKKENRL YVVLISLHGL VRGENMELGS DSDTGGQVKY
0201: VVELARALAR MPGVYRVDLF TRQICSSEVD WSYAEPTEML TTAEDCDGDE TGESSGAYII RIPFGPRDKY LNKEILWPFV QEFVDGALAH ILNMSKVLGE
0301: QIGKGKPVWP YVIHGHYADA GDSAALLSGA LNVPMVLTGH SLGRNKLEQL LKQGRQSKED INSTYKIKRR IEAEELSLDA AELVITSTRQ EIDEQWGLYD
0401: GFDVKLEKVL RARARRGVNC HGRFMPRMAV IPPGMDFTNV EVQEDTPEGD GDLASLVGGT EGSSPKAVPT IWSEVMRFFT NPHKPMILAL SRPDPKKNIT
0501: TLLKAFGECR PLRELANLTL IMGNRDDIDE LSSGNASVLT TVLKLIDKYD LYGSVAYPKH HKQSDVPDIY RLAANTKGVF INPALVEPFG LTLIEAAAHG
0601: LPMVATKNGG PVDIHRALHN GLLVDPHDQE AIANALLKLV SEKNLWHECR INGWKNIHLF SWPEHCRTYL TRIAACRMRH PQWQTDADEV AAQDDEFSLN
0701: DSLKDVQDMS LRLSMDGDKP SLNGSLEPNS ADPVKQIMSR MRTPEIKSKP ELQGKKQSDN LGSKYPVLRR RERLVVLAVD CYDNEGAPDE KAMVPMIQNI
0801: IKAVRSDPQM AKNSGFAIST SMPLDELTRF LKSAKIQVSE FDTLICSSGS EVYYPGGEEG KLLPDPDYSS HIDYRWGMEG LKNTVWKLMN TTAVGGEARN
0901: KGSPSLIQED QASSNSHCVA YMIKDRSKVM RVDDLRQKLR LRGLRCHPMY CRNSTRMQIV PLLASRSQAL RYLFVRWRLN VANMYVVVGD RGDTDYEELI
1001: SGTHKTVIVK GLVTLGSDAL LRSTDLRDDI VPSESPFIGF LKVDSPVKEI TDIFKQLSKA TA
Arabidopsis Description
SPS3SPS3F [Source:UniProtKB/TrEMBL;Acc:A0A178WKI5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.