Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89776 | Canola | cytosol | 92.66 | 92.48 |
| CDY18270 | Canola | cytosol | 92.56 | 92.3 |
| Bra015364.1-P | Field mustard | cytosol | 74.01 | 92.04 |
| VIT_05s0029g01140.t01 | Wine grape | cytosol | 78.06 | 77.69 |
| PGSC0003DMT400067951 | Potato | nucleus | 76.08 | 75.94 |
| Solyc09g092130.2.1 | Tomato | nucleus, unclear | 75.99 | 75.85 |
| KRG98934 | Soybean | cytosol | 74.58 | 75.21 |
| KRH46034 | Soybean | cytosol | 74.67 | 75.17 |
| KRH14493 | Soybean | cytosol | 74.67 | 74.6 |
| GSMUA_Achr4P16070_001 | Banana | nucleus | 73.45 | 72.09 |
| Zm00001d012036_P001 | Maize | nucleus | 67.8 | 67.42 |
| Zm00001d042353_P003 | Maize | nucleus | 67.98 | 66.91 |
| EES04111 | Sorghum | nucleus | 67.98 | 66.79 |
| Os01t0919400-01 | Rice | plasma membrane | 67.23 | 65.87 |
| TraesCS3B01G461800.1 | Wheat | nucleus | 66.2 | 65.76 |
| TraesCS3D01G420300.1 | Wheat | nucleus | 65.91 | 65.36 |
| TraesCS3A01G425500.1 | Wheat | nucleus | 65.91 | 65.18 |
| HORVU3Hr1G093830.2 | Barley | cytosol, nucleus | 60.08 | 64.25 |
| AT5G20280.1 | Thale cress | cytosol | 55.84 | 56.86 |
| AT4G10120.3 | Thale cress | cytosol | 56.03 | 56.67 |
| AT5G11110.1 | Thale cress | cytosol | 55.46 | 56.26 |
| HORVU4Hr1G015570.3 | Barley | cytosol | 53.48 | 53.79 |
| TraesCS4D01G088200.1 | Wheat | cytosol, golgi, unclear | 53.3 | 53.65 |
| TraesCS4A01G225100.1 | Wheat | cytosol | 53.39 | 53.59 |
| TraesCS4B01G091100.1 | Wheat | cytosol | 53.48 | 53.58 |
| KXG28137 | Sorghum | cytosol | 52.54 | 52.15 |
| Zm00001d048979_P001 | Maize | cytosol | 48.87 | 50.83 |
| Os11t0236100-01 | Rice | cytosol, plasma membrane | 21.19 | 44.2 |
| AT5G49190.1 | Thale cress | cytosol | 15.91 | 20.94 |
| AT5G20830.1 | Thale cress | cytosol | 15.72 | 20.67 |
| AT3G43190.1 | Thale cress | cytosol | 15.72 | 20.67 |
| AT4G02280.1 | Thale cress | mitochondrion | 15.54 | 20.4 |
| AT5G37180.1 | Thale cress | cytosol | 15.44 | 19.59 |
| AT1G73370.1 | Thale cress | cytosol | 15.25 | 17.2 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.1000 | Gene3D:3.40.50.2000 | Gene3D:3.90.1070.10 | EntrezGene:839382 |
| UniProt:A0A178WKI5 | ProteinID:AAF40445.1 | ProteinID:AEE27759.1 | ArrayExpress:AT1G04920 | EnsemblPlantsGene:AT1G04920 | RefSeq:AT1G04920 |
| TAIR:AT1G04920 | RefSeq:AT1G04920-TAIR-G | EnsemblPlants:AT1G04920.1 | TAIR:AT1G04920.1 | Symbol:ATSPS3F | EMBL:AY078949 |
| Unigene:At.42425 | EMBL:BT002210 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005975 | GO:GO:0005985 | GO:GO:0005986 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016157 | GO:GO:0016740 |
| GO:GO:0016757 | GO:GO:0046524 | InterPro:Glyco_trans_1 | InterPro:HAD_sf | InterPro:IPR023214 | EMBL:KJ139031 |
| RefSeq:NP_171984.2 | ProteinID:OAP18025.1 | PFAM:PF00534 | PFAM:PF00862 | PFAM:PF05116 | PO:PO:0000293 |
| PO:PO:0001185 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0025022 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF360 | UniProt:Q8RY24 | InterPro:SPP_N | InterPro:SPS_C |
| SUPFAM:SSF53756 | InterPro:Sucrose_synth | InterPro:SucrsPsyn_pln | TIGRFAMs:TIGR02468 | UniParc:UPI00000AC684 | UniProt:W8PW44 |
| SEG:seg | : | : | : | : | : |
Description
SPS3SPS3F [Source:UniProtKB/TrEMBL;Acc:A0A178WKI5]
Coordinates
chr1:-:1391434..1395953
Molecular Weight (calculated)
119483.0 Da
IEP (calculated)
6.216
GRAVY (calculated)
-0.478
Length
1062 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGNEWINGY LEAILDSQAQ GIEETQQKPQ ASVNLREGDG QYFNPTKYFV EEVVTGVDET DLHRTWLKVV ATRNSRERNS RLENMCWRIW HLTRKKKQLE
0101: WEDSQRIANR RLEREQGRRD ATEDLSEDLS EGEKGDGLGE IVQPETPRRQ LQRNLSNLEI WSDDKKENRL YVVLISLHGL VRGENMELGS DSDTGGQVKY
0201: VVELARALAR MPGVYRVDLF TRQICSSEVD WSYAEPTEML TTAEDCDGDE TGESSGAYII RIPFGPRDKY LNKEILWPFV QEFVDGALAH ILNMSKVLGE
0301: QIGKGKPVWP YVIHGHYADA GDSAALLSGA LNVPMVLTGH SLGRNKLEQL LKQGRQSKED INSTYKIKRR IEAEELSLDA AELVITSTRQ EIDEQWGLYD
0401: GFDVKLEKVL RARARRGVNC HGRFMPRMAV IPPGMDFTNV EVQEDTPEGD GDLASLVGGT EGSSPKAVPT IWSEVMRFFT NPHKPMILAL SRPDPKKNIT
0501: TLLKAFGECR PLRELANLTL IMGNRDDIDE LSSGNASVLT TVLKLIDKYD LYGSVAYPKH HKQSDVPDIY RLAANTKGVF INPALVEPFG LTLIEAAAHG
0601: LPMVATKNGG PVDIHRALHN GLLVDPHDQE AIANALLKLV SEKNLWHECR INGWKNIHLF SWPEHCRTYL TRIAACRMRH PQWQTDADEV AAQDDEFSLN
0701: DSLKDVQDMS LRLSMDGDKP SLNGSLEPNS ADPVKQIMSR MRTPEIKSKP ELQGKKQSDN LGSKYPVLRR RERLVVLAVD CYDNEGAPDE KAMVPMIQNI
0801: IKAVRSDPQM AKNSGFAIST SMPLDELTRF LKSAKIQVSE FDTLICSSGS EVYYPGGEEG KLLPDPDYSS HIDYRWGMEG LKNTVWKLMN TTAVGGEARN
0901: KGSPSLIQED QASSNSHCVA YMIKDRSKVM RVDDLRQKLR LRGLRCHPMY CRNSTRMQIV PLLASRSQAL RYLFVRWRLN VANMYVVVGD RGDTDYEELI
1001: SGTHKTVIVK GLVTLGSDAL LRSTDLRDDI VPSESPFIGF LKVDSPVKEI TDIFKQLSKA TA
0101: WEDSQRIANR RLEREQGRRD ATEDLSEDLS EGEKGDGLGE IVQPETPRRQ LQRNLSNLEI WSDDKKENRL YVVLISLHGL VRGENMELGS DSDTGGQVKY
0201: VVELARALAR MPGVYRVDLF TRQICSSEVD WSYAEPTEML TTAEDCDGDE TGESSGAYII RIPFGPRDKY LNKEILWPFV QEFVDGALAH ILNMSKVLGE
0301: QIGKGKPVWP YVIHGHYADA GDSAALLSGA LNVPMVLTGH SLGRNKLEQL LKQGRQSKED INSTYKIKRR IEAEELSLDA AELVITSTRQ EIDEQWGLYD
0401: GFDVKLEKVL RARARRGVNC HGRFMPRMAV IPPGMDFTNV EVQEDTPEGD GDLASLVGGT EGSSPKAVPT IWSEVMRFFT NPHKPMILAL SRPDPKKNIT
0501: TLLKAFGECR PLRELANLTL IMGNRDDIDE LSSGNASVLT TVLKLIDKYD LYGSVAYPKH HKQSDVPDIY RLAANTKGVF INPALVEPFG LTLIEAAAHG
0601: LPMVATKNGG PVDIHRALHN GLLVDPHDQE AIANALLKLV SEKNLWHECR INGWKNIHLF SWPEHCRTYL TRIAACRMRH PQWQTDADEV AAQDDEFSLN
0701: DSLKDVQDMS LRLSMDGDKP SLNGSLEPNS ADPVKQIMSR MRTPEIKSKP ELQGKKQSDN LGSKYPVLRR RERLVVLAVD CYDNEGAPDE KAMVPMIQNI
0801: IKAVRSDPQM AKNSGFAIST SMPLDELTRF LKSAKIQVSE FDTLICSSGS EVYYPGGEEG KLLPDPDYSS HIDYRWGMEG LKNTVWKLMN TTAVGGEARN
0901: KGSPSLIQED QASSNSHCVA YMIKDRSKVM RVDDLRQKLR LRGLRCHPMY CRNSTRMQIV PLLASRSQAL RYLFVRWRLN VANMYVVVGD RGDTDYEELI
1001: SGTHKTVIVK GLVTLGSDAL LRSTDLRDDI VPSESPFIGF LKVDSPVKEI TDIFKQLSKA TA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.