Factsheet for HORVU4Hr1G015570.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G088200.1	Wheat	cytosol, golgi, unclear	94.79	94.88
TraesCS4B01G091100.1	Wheat	cytosol	94.7	94.34
TraesCS4A01G225100.1	Wheat	cytosol	94.51	94.33
Os11t0236100-01	Rice	cytosol, plasma membrane	38.54	79.96
Zm00001d048979_P001	Maize	cytosol	74.43	76.98
KXG28137	Sorghum	cytosol	77.75	76.73
VIT_05s0029g01140.t01	Wine grape	cytosol	54.92	54.36
GSMUA_Achr4P16070_001	Banana	nucleus	55.02	53.7
CDY18270	Canola	cytosol	54.07	53.62
CDX89776	Canola	cytosol	53.98	53.57
AT1G04920.1	Thale cress	cytosol	53.79	53.48
PGSC0003DMT400067951	Potato	nucleus	53.5	53.1
KRG98934	Soybean	cytosol	52.94	53.09
KRH46034	Soybean	cytosol	53.03	53.08
Solyc09g092130.2.1	Tomato	nucleus, unclear	53.31	52.91
KRH14493	Soybean	cytosol	53.22	52.87
Bra015364.1-P	Field mustard	cytosol	42.33	52.34
HORVU3Hr1G093830.2	Barley	cytosol, nucleus	47.92	50.96
HORVU3Hr1G002280.1	Barley	plastid	49.34	46.11
HORVU6Hr1G028330.1	Barley	endoplasmic reticulum, golgi	43.84	44.86
HORVU7Hr1G115590.10	Barley	nucleus	40.34	42.64
HORVU7Hr1G033230.2	Barley	mitochondrion	15.25	19.9
HORVU4Hr1G049500.3	Barley	cytosol	15.25	19.88
HORVU7Hr1G007220.8	Barley	cytosol	15.15	19.63
HORVU2Hr1G030870.1	Barley	plasma membrane	14.87	19.24
HORVU6Hr1G094880.6	Barley	cytosol	14.96	18.35
HORVU0Hr1G019020.1	Barley	cytosol	2.56	18.12
HORVU7Hr1G120520.1	Barley	cytosol	14.77	18.08
HORVU5Hr1G050660.1	Barley	cytosol	0.28	7.5

Protein Annotations

KEGG:00500+2.4.1.14	MapMan:3.1.2.7	Gene3D:3.40.50.2000	EMBL:AK356780	EMBL:AK358916	ncoils:Coil
UniProt:F2CYS4	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016740	GO:GO:0046524	InterPro:Glyco_trans_1	InterPro:Glyco_trans_4-like_N	EnsemblPlantsGene:HORVU4Hr1G015570	EnsemblPlants:HORVU4Hr1G015570.3
PFAM:PF00534	PFAM:PF05116	PFAM:PF13579	PANTHER:PTHR12526	PANTHER:PTHR12526:SF358	InterPro:SPP_N
InterPro:SPS_C	SUPFAM:SSF53756	InterPro:SucrsPsyn_pln	TIGRFAMs:TIGR02468	UniParc:UPI00020055EB	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CYS4]

Coordinates

chrchr4H:-:60667847..60673540

Molecular Weight (calculated)

115282.0 Da

IEP (calculated)

6.089

GRAVY (calculated)

-0.317

Length

1056 amino acids

Sequence
(BLAST)

0001: MAVGNEWING YLEAILDAGS KLRVQGVSLP PLEPAPALAS EESSATYNPT RYFVEEVVRS FDDQALHKTW TKVVAMRNSQ ERSNRLENLC WRIWNVARQK
0101: KQVERDYSQE VARRKLEQEL GSREAAEDLS ELSEGEKETA PKPADVAAVP HADEHPRTRL ARINSEVRLV SDDEDDQGKD RNLYIVLISI HGLVRGENME
0201: LGRDSDTGGQ VKYVVELARA LAATAGVHRV DLLTRQISCP DVDWTYGEPV EMLERLSSGG ADDDDDGDES GGGGAYIVRL PCGPRDQYIP KEELWPHIPE
0301: FVDRALSHVT NVARALGEQL QPPPSDAPAT ATAAPVWPYV IHGHYADAAE VAANLASALN VPMVMTGHSL GRNKLEQLLK LGRMHGPEIQ GTYKIARRIE
0401: AEETGLDTAE MVVTSTKQEI EEQWGLYDGF DLMVERKLRV RQRRGVSSLG RYMPRMAVIP PGMDFSFVDT QDTADGDGAD LQMLIDPAKA KKALPPIWSE
0501: VLRFFTNPHK PMILALSRPD PKKNITTLLK AYGESRQLRE LANLTLILGN RDDIDEMAGG GGTVLTAVLK LIDRYDLYGQ VAYPKHHKQT DVPHIYRLAA
0601: KTKGVFINPA LVEPFGLTII EAAAYGLPVV ATKNGGPVDI LKALHNGLLV DPHSAEAITG ALLSLLAEKG QWSECRRNGL RNIHRFSWPH HCRLYLSHVA
0701: AYCDHPSPHQ RLRVPGVPSA SASMNGDESL SDSLRGLSLH ISVDASNDLN AGDSAAVIMD ALRRRPATDR RGGSGRALGF APGRRQSLLV VAVDCYGDDG
0801: KPDVEQLKKA IEAAMSAGDG AGGRQGYVLS TGMTIPETAE TLKACGADPA GFDALICSSG AEICYPWKEL TADEEYNGHV AFRWPGDHVK AAVPRLGRAD
0901: DALASDLAVD ASACSVHCHA YAATDASKVR KVDSIRQQLR MRGFRCNLVY TRACTRLNVI PLSASRPRAL RYLSIQWGID LSKVAVLVGE AGDTDREKLL
1001: PGLHRTLILP GMVSRGSEQL VRGEDGYATQ DVVAMDSPNI ATLAEGQALS ELLKAM

Best Arabidopsis Sequence Match ( AT4G10120.1 )
(BLAST)

0001: MARNDWINSY LEAILDVGTS KKKRFESNSK IVQKLGDINS KDHQEKVFGD MNGKDHQEKV FSPIKYFVEE VVNSFDESDL YKTWIKVIAT RNTRERSNRL
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK

Arabidopsis Description

SPS4Probable sucrose-phosphate synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:F4JLK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.