Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G508100.1 | Wheat | cytosol | 88.19 | 90.73 |
| TraesCS7B01G434300.1 | Wheat | cytosol | 88.09 | 90.63 |
| TraesCS7A01G518200.1 | Wheat | cytosol | 88.09 | 90.53 |
| Os06t0643800-01 | Rice | plasma membrane | 15.42 | 83.7 |
| KXG20466 | Sorghum | cytosol | 74.77 | 76.22 |
| Zm00001d036749_P001 | Maize | cytosol | 73.87 | 75.69 |
| Zm00001d046595_P002 | Maize | cytosol | 72.97 | 74.54 |
| HORVU6Hr1G028330.1 | Barley | endoplasmic reticulum, golgi | 73.47 | 71.12 |
| Zm00001d016399_P002 | Maize | extracellular | 10.31 | 65.61 |
| CDX88168 | Canola | nucleus | 54.35 | 56.56 |
| CDX70382 | Canola | cytosol | 54.25 | 56.34 |
| CDX80498 | Canola | cytosol | 54.45 | 56.26 |
| GSMUA_Achr4P06050_001 | Banana | cytosol | 59.56 | 56.19 |
| GSMUA_Achr9P22510_001 | Banana | cytosol | 59.36 | 55.89 |
| CDX92473 | Canola | cytosol | 53.95 | 55.8 |
| CDY35815 | Canola | cytosol | 53.85 | 55.69 |
| CDY45096 | Canola | cytosol | 53.95 | 55.45 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 56.66 | 53.8 |
| KRH20178 | Soybean | nucleus | 56.46 | 53.26 |
| KRH03629 | Soybean | endoplasmic reticulum | 55.86 | 52.69 |
| PGSC0003DMT400071807 | Potato | cytosol | 55.46 | 52.56 |
| AT5G20280.1 | Thale cress | cytosol | 54.65 | 52.35 |
| Bra009830.1-P | Field mustard | nucleus | 54.75 | 52.24 |
| Solyc07g007790.2.1 | Tomato | cytosol | 55.06 | 52.18 |
| Bra002289.1-P | Field mustard | cytosol | 54.35 | 52.11 |
| VIT_04s0008g05730.t01 | Wine grape | cytosol | 55.16 | 52.08 |
| Bra020096.1-P | Field mustard | cytosol | 53.55 | 51.94 |
| CDX78411 | Canola | cytosol | 53.85 | 51.78 |
| Bra006090.1-P | Field mustard | cytosol | 53.75 | 51.68 |
| AT5G11110.1 | Thale cress | cytosol | 53.95 | 51.48 |
| Solyc08g042000.2.1 | Tomato | nucleus | 53.05 | 50.72 |
| HORVU3Hr1G002280.1 | Barley | plastid | 56.16 | 49.65 |
| PGSC0003DMT400076855 | Potato | cytosol, peroxisome, plastid | 23.52 | 45.02 |
| HORVU3Hr1G093830.2 | Barley | cytosol, nucleus | 43.74 | 44.01 |
| HORVU4Hr1G015570.3 | Barley | cytosol | 42.64 | 40.34 |
| HORVU4Hr1G049500.3 | Barley | cytosol | 15.62 | 19.26 |
| HORVU7Hr1G033230.2 | Barley | mitochondrion | 15.32 | 18.91 |
| HORVU7Hr1G007220.8 | Barley | cytosol | 14.81 | 18.16 |
| HORVU2Hr1G030870.1 | Barley | plasma membrane | 14.81 | 18.14 |
| HORVU6Hr1G094880.6 | Barley | cytosol | 14.81 | 17.19 |
| HORVU7Hr1G120520.1 | Barley | cytosol | 14.71 | 17.03 |
| HORVU0Hr1G019020.1 | Barley | cytosol | 2.4 | 16.11 |
| HORVU5Hr1G050660.1 | Barley | cytosol | 0.3 | 7.5 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.2000 | UniProt:A0A287XWL1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005975 | GO:GO:0005985 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016157 |
| GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_1 | EnsemblPlantsGene:HORVU7Hr1G115590 | EnsemblPlants:HORVU7Hr1G115590.10 | PFAM:PF00534 |
| PFAM:PF00862 | PFAM:PF05116 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF406 | InterPro:SPP_N | InterPro:SPS_C |
| SUPFAM:SSF53756 | InterPro:Sucrose_synth | UniParc:UPI000B464053 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr7H:-:641865660..641873427
Molecular Weight (calculated)
111300.0 Da
IEP (calculated)
7.699
GRAVY (calculated)
-0.333
Length
999 amino acids
Sequence
(BLAST)
(BLAST)
001: VRERQLDQQL PGRHPRRGEG RGLGERRRRG RGPALAPPPR ARPLLPGALL RRGGHHRLRR DRPLQDVVPR ERDAEPAGEE HAAGEHDLED LEPRQEEEGG
101: APFSLLVLRF SLGALPGSSA LSTFLTPAGA LVEDAKRLKR RLETEKPRTD ATAEMSEDLF EGEKGEDAGD ASVAYGDSSA GNTPRIGAVD KLYIVLISLH
201: GLVRGENLEL GRDSDTSGQV KYVVELAKAL SSCPGVYRVD LLTRQILAPN YDRGYGEPSE TLVPTSSKNL KQERGENSGA YITRIPFGPK DKYLAKEHLW
301: PYVQEFVDGA LSHIVHMSKI IGEEIGCGHP MWPAVIHGHY ASAGVAAALI SGALNVHMVF TGHFLGKDKL EGLLKQGRQT REEINMTYKI MRRIEAEELS
401: LDASEIVIAS TRQEIEEQWN LYDGFEVMLA RKLRARVKRG ANCYGRYMPR MVIIPPGVEF GHMIHEFDMD GEEDSPSPAS EDPPIWSEIM RFFTNPRKPL
501: ILAVARPYPE KNITTLVKAF GECRPLRELA NLTLIMGNRE AISKMSNMSA AVLTSVLTLI DEYDLYGQVA YPKHHKHSEV LDIYRLAART KGAFVNVAYF
601: EQFGVTLIEA AMHGLPVIAT KNGAPVEIHQ VLDNGLLVDP HDQHAIADAL YKLLSDKQLW SRCRENGLKN IHRFSWPEHC KNYLSRILTL SPRYPAFPSN
701: EDQIKAPIKG RKCIIVIAVD SASKKDLVCI IKNSIEATHK ETLSGSTGFV LSTSLTMSEI HSLLISAGMA PTDFDAFICN SGSDLFYPLR AGDSPSTSRV
801: TFALDRNYQS HIEYRWGGEG LRKYLVKWAS SIVERRGRTE KQVIFEDAEH SSTSCLAFRV VNPNYLPPLK ELQKLMRIQS LRCHALYNHS ATRLSVIPIH
901: ASRSQALRYL SVRWGIELRN VVILVGESGD SDYEELFGGL HKTIVLKGEF NTPANRIHTV RRYPLQDVIA LDCSNIIGVE GCSTDDLTPT LKTLGIPTK
101: APFSLLVLRF SLGALPGSSA LSTFLTPAGA LVEDAKRLKR RLETEKPRTD ATAEMSEDLF EGEKGEDAGD ASVAYGDSSA GNTPRIGAVD KLYIVLISLH
201: GLVRGENLEL GRDSDTSGQV KYVVELAKAL SSCPGVYRVD LLTRQILAPN YDRGYGEPSE TLVPTSSKNL KQERGENSGA YITRIPFGPK DKYLAKEHLW
301: PYVQEFVDGA LSHIVHMSKI IGEEIGCGHP MWPAVIHGHY ASAGVAAALI SGALNVHMVF TGHFLGKDKL EGLLKQGRQT REEINMTYKI MRRIEAEELS
401: LDASEIVIAS TRQEIEEQWN LYDGFEVMLA RKLRARVKRG ANCYGRYMPR MVIIPPGVEF GHMIHEFDMD GEEDSPSPAS EDPPIWSEIM RFFTNPRKPL
501: ILAVARPYPE KNITTLVKAF GECRPLRELA NLTLIMGNRE AISKMSNMSA AVLTSVLTLI DEYDLYGQVA YPKHHKHSEV LDIYRLAART KGAFVNVAYF
601: EQFGVTLIEA AMHGLPVIAT KNGAPVEIHQ VLDNGLLVDP HDQHAIADAL YKLLSDKQLW SRCRENGLKN IHRFSWPEHC KNYLSRILTL SPRYPAFPSN
701: EDQIKAPIKG RKCIIVIAVD SASKKDLVCI IKNSIEATHK ETLSGSTGFV LSTSLTMSEI HSLLISAGMA PTDFDAFICN SGSDLFYPLR AGDSPSTSRV
801: TFALDRNYQS HIEYRWGGEG LRKYLVKWAS SIVERRGRTE KQVIFEDAEH SSTSCLAFRV VNPNYLPPLK ELQKLMRIQS LRCHALYNHS ATRLSVIPIH
901: ASRSQALRYL SVRWGIELRN VVILVGESGD SDYEELFGGL HKTIVLKGEF NTPANRIHTV RRYPLQDVIA LDCSNIIGVE GCSTDDLTPT LKTLGIPTK
0001: MARNDWINSY LEAILDVGTS KKKRFESNSK IVQKLGDINS KDHQEKVFGD MNGKDHQEKV FSPIKYFVEE VVNSFDESDL YKTWIKVIAT RNTRERSNRL
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
Arabidopsis Description
SPS4Probable sucrose-phosphate synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:F4JLK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.