Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G077780.1 | Barley | mitochondrion | 66.76 | 60.77 |
| TraesCS3A01G326500.1 | Wheat | mitochondrion | 65.35 | 59.49 |
| TraesCS3B01G355800.1 | Wheat | mitochondrion | 64.79 | 58.97 |
| TraesCS3D01G319900.1 | Wheat | mitochondrion | 50.99 | 53.55 |
| Os01t0793200-01 | Rice | mitochondrion | 56.06 | 51.03 |
| EES01589 | Sorghum | mitochondrion | 55.21 | 50.0 |
| Zm00001d043225_P001 | Maize | mitochondrion | 53.52 | 48.35 |
| GSMUA_Achr6P00410_001 | Banana | mitochondrion | 36.34 | 36.65 |
| VIT_10s0116g00090.t01 | Wine grape | mitochondrion | 22.82 | 31.76 |
| KRH11411 | Soybean | nucleus | 34.08 | 31.19 |
| KRH20872 | Soybean | mitochondrion | 15.21 | 30.68 |
| CDY07260 | Canola | cytosol | 12.96 | 30.07 |
| VIT_10s0116g00030.t01 | Wine grape | plastid | 33.24 | 29.8 |
| CDX97972 | Canola | cytosol | 22.82 | 29.03 |
| Bra019842.1-P | Field mustard | cytosol | 22.82 | 29.03 |
| PGSC0003DMT400029367 | Potato | mitochondrion | 30.99 | 27.36 |
| Solyc10g005280.1.1 | Tomato | mitochondrion | 30.7 | 27.11 |
| CDY47165 | Canola | mitochondrion | 30.14 | 26.23 |
| CDY25328 | Canola | mitochondrion, plastid | 30.14 | 26.23 |
| Bra028380.1-P | Field mustard | mitochondrion | 30.14 | 26.23 |
| AT1G61870.1 | Thale cress | mitochondrion | 29.86 | 25.98 |
| AT1G11630.1 | Thale cress | mitochondrion | 26.48 | 23.21 |
| CDY49792 | Canola | plastid | 26.48 | 23.04 |
| HORVU2Hr1G030800.1 | Barley | cytosol, extracellular | 14.93 | 22.75 |
| HORVU3Hr1G101970.1 | Barley | cytosol | 9.86 | 19.13 |
| HORVU3Hr1G077400.1 | Barley | cytosol | 20.56 | 19.06 |
| HORVU6Hr1G019320.1 | Barley | plastid | 23.66 | 18.1 |
| HORVU6Hr1G047990.1 | Barley | cytosol, mitochondrion, plastid | 19.15 | 17.39 |
| HORVU5Hr1G013060.2 | Barley | cytosol, mitochondrion, plastid | 19.15 | 17.39 |
| HORVU6Hr1G094400.1 | Barley | plastid | 20.85 | 17.05 |
| HORVU3Hr1G077440.2 | Barley | mitochondrion | 22.25 | 16.09 |
| HORVU3Hr1G070290.2 | Barley | mitochondrion | 17.46 | 15.66 |
| HORVU6Hr1G059290.1 | Barley | cytosol | 20.56 | 15.18 |
| HORVU7Hr1G049150.5 | Barley | mitochondrion, plastid | 18.59 | 14.7 |
| HORVU1Hr1G042520.2 | Barley | mitochondrion | 18.59 | 14.67 |
| KRH20873 | Soybean | cytosol, mitochondrion | 5.07 | 14.17 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G041750.1 | EnsemblPlantsGene:HORVU5Hr1G041750 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | ncoils:Coil | PANTHER:PTHR24015 |
| PANTHER:PTHR24015:SF579 | PFAM:PF13041 | PFscan:PS51375 | SEG:seg | TIGRFAMs:TIGR00756 | UniParc:UPI000B46545D |
| UniProt:A0A287QYH7 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:317009527..317010760
Molecular Weight (calculated)
31762.2 Da
IEP (calculated)
9.941
GRAVY (calculated)
-0.245
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: LKPKHLMVST MKAKLGXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXA LSLATSRLST APDSLRDLTS SLLIPDHAHH AIVLFGQAGL LPDAISTFQS
101: SPSTRSLNAL LFACILAGNH AEAARIFQTF PDAHRVKPNA ETFNSIIKSF SESGTTRSFY SVFDEMCKQG LKPTATTFTA AIAGFYKEER FDDVEKVIKL
201: MKKHGCGESL QVYNARVQGL CKLGRNGDAK ALLSEMAKKG TKPSWVTYNH LIYGFCKEGD LEEVKRLYKE XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXLQLIFP SRRQGPKFGE VCTLGSRSCH INFSTKNSER THGDLSPRPS MGQRS
101: SPSTRSLNAL LFACILAGNH AEAARIFQTF PDAHRVKPNA ETFNSIIKSF SESGTTRSFY SVFDEMCKQG LKPTATTFTA AIAGFYKEER FDDVEKVIKL
201: MKKHGCGESL QVYNARVQGL CKLGRNGDAK ALLSEMAKKG TKPSWVTYNH LIYGFCKEGD LEEVKRLYKE XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXLQLIFP SRRQGPKFGE VCTLGSRSCH INFSTKNSER THGDLSPRPS MGQRS
001: MALLSRIRSS TSLFRHLNAS PQIRSLSSAS TILSPDSKTP LTSKEKSKAA LSLLKSEKDP DRILEICRAA SLTPDCRIDR IAFSAAVENL AEKKHFSAVS
101: NLLDGFIENR PDLKSERFAA HAIVLYAQAN MLDHSLRVFR DLEKFEISRT VKSLNALLFA CLVAKDYKEA KRVYIEMPKM YGIEPDLETY NRMIKVFCES
201: GSASSSYSIV AEMERKGIKP NSSSFGLMIS GFYAEDKSDE VGKVLAMMKD RGVNIGVSTY NIRIQSLCKR KKSKEAKALL DGMLSAGMKP NTVTYSHLIH
301: GFCNEDDFEE AKKLFKIMVN RGCKPDSECY FTLIYYLCKG GDFETALSLC KESMEKNWVP SFSIMKSLVN GLAKDSKVEE AKELIGQVKE KFTRNVELWN
401: EVEAALPQ
101: NLLDGFIENR PDLKSERFAA HAIVLYAQAN MLDHSLRVFR DLEKFEISRT VKSLNALLFA CLVAKDYKEA KRVYIEMPKM YGIEPDLETY NRMIKVFCES
201: GSASSSYSIV AEMERKGIKP NSSSFGLMIS GFYAEDKSDE VGKVLAMMKD RGVNIGVSTY NIRIQSLCKR KKSKEAKALL DGMLSAGMKP NTVTYSHLIH
301: GFCNEDDFEE AKKLFKIMVN RGCKPDSECY FTLIYYLCKG GDFETALSLC KESMEKNWVP SFSIMKSLVN GLAKDSKVEE AKELIGQVKE KFTRNVELWN
401: EVEAALPQ
Arabidopsis Description
PPR336Pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LE47]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.