Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G136500.1 | Wheat | endoplasmic reticulum, plastid | 95.1 | 95.96 |
| TraesCS7D01G240000.1 | Wheat | endoplasmic reticulum, plastid | 94.21 | 95.06 |
| TraesCS7A01G240900.1 | Wheat | mitochondrion, plastid | 94.65 | 94.87 |
| HORVU3Hr1G070290.2 | Barley | mitochondrion | 72.83 | 82.58 |
| Os08t0499800-01 | Rice | mitochondrion | 79.06 | 80.14 |
| Zm00001d006609_P001 | Maize | cytosol | 55.68 | 80.13 |
| Zm00001d014711_P001 | Maize | cytosol | 47.66 | 75.35 |
| Zm00001d031321_P001 | Maize | mitochondrion | 76.17 | 74.51 |
| EES15434 | Sorghum | plastid | 76.84 | 74.19 |
| CDY54310 | Canola | mitochondrion | 44.77 | 51.41 |
| CDY38649 | Canola | mitochondrion | 43.65 | 50.52 |
| Bra008492.1-P | Field mustard | mitochondrion | 44.1 | 50.51 |
| CDY37572 | Canola | mitochondrion | 44.54 | 50.25 |
| AT1G80150.1 | Thale cress | mitochondrion | 44.32 | 50.13 |
| CDY57688 | Canola | mitochondrion | 43.21 | 49.62 |
| Bra003553.1-P | Field mustard | mitochondrion | 42.76 | 49.1 |
| VIT_09s0002g06540.t01 | Wine grape | mitochondrion | 45.66 | 48.58 |
| PGSC0003DMT400072924 | Potato | mitochondrion | 42.09 | 46.67 |
| Solyc05g012250.1.1 | Tomato | mitochondrion | 42.09 | 36.7 |
| HORVU3Hr1G077400.1 | Barley | cytosol | 20.71 | 24.28 |
| HORVU3Hr1G077780.1 | Barley | mitochondrion | 20.94 | 24.1 |
| HORVU6Hr1G094400.1 | Barley | plastid | 23.16 | 23.96 |
| HORVU6Hr1G059290.1 | Barley | cytosol | 23.61 | 22.04 |
| HORVU3Hr1G101970.1 | Barley | cytosol | 8.91 | 21.86 |
| HORVU1Hr1G042520.2 | Barley | mitochondrion | 21.38 | 21.33 |
| HORVU6Hr1G019320.1 | Barley | plastid | 21.6 | 20.91 |
| HORVU6Hr1G047990.1 | Barley | cytosol, mitochondrion, plastid | 18.04 | 20.72 |
| HORVU5Hr1G013060.2 | Barley | cytosol, mitochondrion, plastid | 18.04 | 20.72 |
| HORVU2Hr1G030800.1 | Barley | cytosol, extracellular | 10.47 | 20.17 |
| HORVU3Hr1G077440.2 | Barley | mitochondrion | 21.83 | 19.96 |
| HORVU5Hr1G041750.1 | Barley | cytosol | 14.7 | 18.59 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G049150.5 | EnsemblPlantsGene:HORVU7Hr1G049150 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF1623 |
| PFAM:PF01535 | PFAM:PF13041 | PFAM:PF13812 | PFscan:PS51375 | SEG:seg | TIGRFAMs:TIGR00756 |
| UniParc:UPI000B46D5F1 | UniProt:A0A287WEY9 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:170940805..170942881
Molecular Weight (calculated)
51016.3 Da
IEP (calculated)
9.997
GRAVY (calculated)
-0.277
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSLGALRKL CAAFDAVALT IIAAGLSHPR CRPFSARAGA HPPPTDFPTI ASCRAAVTAS RSRRQPSSAP AEAQPERPAA GAEASVLVRI KSERDPVRLY
101: QLFKANADNR VLVENRFAFE DAVARLAGAR RNDLVEEILE QHKALPQGRR EGFVIRIIGL YGRARMPEHA LRTFREMEMY GCERTVKSLN ATMKVLMQAR
201: LFDDVLRLLD EASPRYGVEL DDISYNTVVK MACDMGELHA AYRVMQEMEK EGVRPDVITY TTLMAVFYKN GHREVGDGLW NLMRLRGCMP TLTSYNVRIQ
301: FLINRRRGWL ANDLVRKMYA AGITPDEITY NLVIKGFFVM GEHEMAKTVF GAMHGRGCKP NERIYQTMVH YLCKRREFNL AFRLCKDSME KNWFPSVDTI
401: HHLLKGLMVI KKDRNAREIM RLVAERKPSY SVDDVKAFQD ILSHGKTGR
101: QLFKANADNR VLVENRFAFE DAVARLAGAR RNDLVEEILE QHKALPQGRR EGFVIRIIGL YGRARMPEHA LRTFREMEMY GCERTVKSLN ATMKVLMQAR
201: LFDDVLRLLD EASPRYGVEL DDISYNTVVK MACDMGELHA AYRVMQEMEK EGVRPDVITY TTLMAVFYKN GHREVGDGLW NLMRLRGCMP TLTSYNVRIQ
301: FLINRRRGWL ANDLVRKMYA AGITPDEITY NLVIKGFFVM GEHEMAKTVF GAMHGRGCKP NERIYQTMVH YLCKRREFNL AFRLCKDSME KNWFPSVDTI
401: HHLLKGLMVI KKDRNAREIM RLVAERKPSY SVDDVKAFQD ILSHGKTGR
001: MLSLRHIRRF CHFPSSAATG IAYVSTESNQ IQGLKPLEEP ALVKLKSERD PEKLYNLFKA NATNRLVIEN RFAFEDTVSR LAGAGRLDFI EDLLEHQKTL
101: PQGRREGFIV RIIMLYGKAG MTKQALDTFF NMDLYGCKRS VKSFNAALQV LSFNPDLHTI WEFLHDAPSK YGIDIDAVSF NIAIKSFCEL GILDGAYMAM
201: REMEKSGLTP DVVTYTTLIS ALYKHERCVI GNGLWNLMVL KGCKPNLTTF NVRIQFLVNR RRAWDANDLL LLMPKLQVEP DSITYNMVIK GFFLARFPDM
301: AERVYTAMHG KGYKPNLKIY QTMIHYLCKA GNFDLAYTMC KDCMRKKWYP NLDTVEMLLK GLVKKGQLDQ AKSIMELVHR RVPPFRSKQL LSLKSIL
101: PQGRREGFIV RIIMLYGKAG MTKQALDTFF NMDLYGCKRS VKSFNAALQV LSFNPDLHTI WEFLHDAPSK YGIDIDAVSF NIAIKSFCEL GILDGAYMAM
201: REMEKSGLTP DVVTYTTLIS ALYKHERCVI GNGLWNLMVL KGCKPNLTTF NVRIQFLVNR RRAWDANDLL LLMPKLQVEP DSITYNMVIK GFFLARFPDM
301: AERVYTAMHG KGYKPNLKIY QTMIHYLCKA GNFDLAYTMC KDCMRKKWYP NLDTVEMLLK GLVKKGQLDQ AKSIMELVHR RVPPFRSKQL LSLKSIL
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GW57]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.