CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031321_P001	Maize	mitochondrion	90.32	91.5
Zm00001d006609_P001	Maize	cytosol	61.08	91.03
Zm00001d014711_P001	Maize	cytosol	54.62	89.44
Os08t0499800-01	Rice	mitochondrion	77.63	81.49
TraesCS7D01G240000.1	Wheat	endoplasmic reticulum, plastid	74.62	77.98
TraesCS7B01G136500.1	Wheat	endoplasmic reticulum, plastid	74.62	77.98
TraesCS7A01G240900.1	Wheat	mitochondrion, plastid	74.84	77.68
HORVU7Hr1G049150.5	Barley	mitochondrion, plastid	74.19	76.84
HORVU3Hr1G070290.2	Barley	mitochondrion	55.48	65.15
CDY54310	Canola	mitochondrion	43.23	51.41
CDY38649	Canola	mitochondrion	42.37	50.77
CDY57688	Canola	mitochondrion	42.58	50.64
Bra008492.1-P	Field mustard	mitochondrion	42.58	50.51
Bra003553.1-P	Field mustard	mitochondrion	42.37	50.38
CDY37572	Canola	mitochondrion	43.01	50.25
AT1G80150.1	Thale cress	mitochondrion	42.8	50.13
VIT_09s0002g06540.t01	Wine grape	mitochondrion	44.73	49.29
PGSC0003DMT400072924	Potato	mitochondrion	40.86	46.91
Solyc05g012250.1.1	Tomato	mitochondrion	40.43	36.5
EES07814	Sorghum	mitochondrion, plastid	23.23	25.78
EES01589	Sorghum	mitochondrion	21.51	25.51
EES01579	Sorghum	mitochondrion	21.72	23.54
EER91465	Sorghum	mitochondrion	21.08	22.27
EES01580	Sorghum	mitochondrion	20.86	22.1
EES05467	Sorghum	mitochondrion	21.51	21.37
EER95222	Sorghum	mitochondrion	21.51	20.28

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:8055213	UniProt:C5YJ88	EnsemblPlants:EES15434	ProteinID:EES15434
ProteinID:EES15434.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518
GO:GO:0004519	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787
GO:GO:0043231	GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	PFAM:PF01535	PFAM:PF13041
PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF1623	InterPro:Pentatricopeptide_repeat	EnsemblPlantsGene:SORBI_3007G217600	SignalP:SignalP-noTM
TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0001A87BA9	RefSeq:XP_002445939.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:64569891..64573982

Molecular Weight (calculated)

52394.6 Da

IEP (calculated)

9.750

GRAVY (calculated)

-0.380

Length

465 amino acids

Sequence
(BLAST)

001: MLSLGALHKL CAAFDAVALT VIAAGLSRPP SGRHPFSSAH AHSPHPVDFP TIAACRAAVS ASKGDRRRRR RPGGGQPSPS SSPAAAAAEE KAEEEQQQQQ
101: PVLVKIKHER DPERLYQLFR TNAHNRLLVE NRFAFEDAVA RLAGARRNDL VEEILEQHKA LPQGRREGFV VRIIGLYGKA GMPSHALRTF QEMGMYGCPR
201: TAKSLNATMK VLLRAQMFDE ALWLFEEGPE KYGVELDDIS CNTVVKIYCD MGDLRAAYRV MQGMEGAGVQ PDVVTYTTLM AAFYKCGQRE VGDGLWNLMR
301: LRGCEPTLAT YNVRIQFLIN RERGWQANEL VRKMYAVGIK PDEITYNLII KGFFMMGEHE MAKTVFGAMH GRGCKPNSKV YQTMVHYLCE RRDFDLAFRF
401: CKDSMEKNWF PSVNTINQLL KGLMAISKDR NAREIMKLVT GRKPPYSDGE MKVFKDILSH RKTGR

Best Arabidopsis Sequence Match ( AT1G80150.1 )
(BLAST)

001: MLSLRHIRRF CHFPSSAATG IAYVSTESNQ IQGLKPLEEP ALVKLKSERD PEKLYNLFKA NATNRLVIEN RFAFEDTVSR LAGAGRLDFI EDLLEHQKTL
101: PQGRREGFIV RIIMLYGKAG MTKQALDTFF NMDLYGCKRS VKSFNAALQV LSFNPDLHTI WEFLHDAPSK YGIDIDAVSF NIAIKSFCEL GILDGAYMAM
201: REMEKSGLTP DVVTYTTLIS ALYKHERCVI GNGLWNLMVL KGCKPNLTTF NVRIQFLVNR RRAWDANDLL LLMPKLQVEP DSITYNMVIK GFFLARFPDM
301: AERVYTAMHG KGYKPNLKIY QTMIHYLCKA GNFDLAYTMC KDCMRKKWYP NLDTVEMLLK GLVKKGQLDQ AKSIMELVHR RVPPFRSKQL LSLKSIL

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GW57]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.