Factsheet for Zm00001d014711_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006609_P001	Maize	cytosol	83.8	76.28
Zm00001d031321_P001	Maize	mitochondrion	96.48	59.7
EES15434	Sorghum	plastid	89.44	54.62
HORVU3Hr1G070290.2	Barley	mitochondrion	75.0	53.79
Os08t0499800-01	Rice	mitochondrion	80.63	51.69
TraesCS7B01G136500.1	Wheat	endoplasmic reticulum, plastid	76.76	48.99
TraesCS7D01G240000.1	Wheat	endoplasmic reticulum, plastid	76.06	48.54
TraesCS7A01G240900.1	Wheat	mitochondrion, plastid	76.41	48.44
HORVU7Hr1G049150.5	Barley	mitochondrion, plastid	75.35	47.66
CDY54310	Canola	mitochondrion	46.48	33.76
Bra008492.1-P	Field mustard	mitochondrion	46.48	33.67
CDY38649	Canola	mitochondrion	45.77	33.51
CDY37572	Canola	mitochondrion	46.83	33.42
CDY57688	Canola	mitochondrion	45.07	32.74
Bra003553.1-P	Field mustard	mitochondrion	45.07	32.74
AT1G80150.1	Thale cress	mitochondrion	45.42	32.49
PGSC0003DMT400072924	Potato	mitochondrion	45.42	31.85
VIT_09s0002g06540.t01	Wine grape	mitochondrion	46.48	31.28
Solyc05g012250.1.1	Tomato	mitochondrion	44.72	24.66
Zm00001d043225_P001	Maize	mitochondrion	27.11	19.59
Zm00001d012606_P001	Maize	mitochondrion	24.65	15.45
Zm00001d018534_P001	Maize	mitochondrion	22.54	15.27
Zm00001d017317_P001	Maize	mitochondrion	25.0	15.07
Zm00001d032661_P001	Maize	mitochondrion	22.89	14.84
Zm00001d013990_P001	Maize	mitochondrion, plastid	11.27	12.6

Protein Annotations

EnsemblPlants:Zm00001d014711_P001	EnsemblPlants:Zm00001d014711_T001	EnsemblPlantsGene:Zm00001d014711	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015
PANTHER:PTHR24015:SF1623	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	ProteinID:AQK66938.1	TIGRFAMs:TIGR00756
UniParc:UPI000844DDEC	UniProt:A0A1D6GVL7	MapMan:35.1	:	:	:

Description

Pentatricopeptide repeat-containing protein mitochondrial

Coordinates

chr5:-:60122204..60123058

Molecular Weight (calculated)

32711.3 Da

IEP (calculated)

9.748

GRAVY (calculated)

-0.309

Length

284 amino acids

Sequence
(BLAST)

001: MPGHALRTFQ EMGMYGCPRT AKSLNATMKV LLRARMFDEA LSLFEEGPEK YDVEVDDISC NTVVKMFCDM GDLRAAYRVM QGMERAGLRS DVITYMTLMA
101: AFYKCGRHEV GDGLWNLMRL RGWVPTLATY NVRIQFLVNR GRGWQANEMA RKIYVAGIKP DEITYNLIIK GFFMMGEHEM AKTVFGAMHG RGCKPNSKVY
201: QTMVHYLCER RDFDLAFRLC KDSMEKNWFP SVDTINQLLK GLMAISKDRN GKEIMKLVTG RKPSYSYGEM KVFKDILSHR KTGR

Best Arabidopsis Sequence Match ( AT1G80150.1 )
(BLAST)

001: MLSLRHIRRF CHFPSSAATG IAYVSTESNQ IQGLKPLEEP ALVKLKSERD PEKLYNLFKA NATNRLVIEN RFAFEDTVSR LAGAGRLDFI EDLLEHQKTL
101: PQGRREGFIV RIIMLYGKAG MTKQALDTFF NMDLYGCKRS VKSFNAALQV LSFNPDLHTI WEFLHDAPSK YGIDIDAVSF NIAIKSFCEL GILDGAYMAM
201: REMEKSGLTP DVVTYTTLIS ALYKHERCVI GNGLWNLMVL KGCKPNLTTF NVRIQFLVNR RRAWDANDLL LLMPKLQVEP DSITYNMVIK GFFLARFPDM
301: AERVYTAMHG KGYKPNLKIY QTMIHYLCKA GNFDLAYTMC KDCMRKKWYP NLDTVEMLLK GLVKKGQLDQ AKSIMELVHR RVPPFRSKQL LSLKSIL

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GW57]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.