Factsheet for AT1G80150.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008492.1-P	Field mustard	mitochondrion	81.36	82.4
CDY38649	Canola	mitochondrion	79.85	81.7
CDY37572	Canola	mitochondrion	80.86	80.65
CDY54310	Canola	mitochondrion	77.58	78.77
Bra003553.1-P	Field mustard	mitochondrion	77.08	78.26
CDY57688	Canola	mitochondrion	76.83	78.01
VIT_09s0002g06540.t01	Wine grape	mitochondrion	65.49	61.61
PGSC0003DMT400072924	Potato	mitochondrion	57.43	56.3
Zm00001d006609_P001	Maize	cytosol	41.56	52.88
Os08t0499800-01	Rice	mitochondrion	50.88	45.6
Zm00001d014711_P001	Maize	cytosol	32.49	45.42
TraesCS7D01G240000.1	Wheat	endoplasmic reticulum, plastid	50.38	44.94
TraesCS7A01G240900.1	Wheat	mitochondrion, plastid	50.63	44.87
TraesCS7B01G136500.1	Wheat	endoplasmic reticulum, plastid	49.87	44.49
HORVU7Hr1G049150.5	Barley	mitochondrion, plastid	50.13	44.32
Zm00001d031321_P001	Maize	mitochondrion	50.88	44.01
Solyc05g012250.1.1	Tomato	mitochondrion	56.93	43.88
EES15434	Sorghum	plastid	50.13	42.8
HORVU3Hr1G070290.2	Barley	mitochondrion	39.8	39.9
AT4G36680.1	Thale cress	mitochondrion	30.48	29.37
AT1G55890.1	Thale cress	mitochondrion	28.21	28.14
AT2G18520.1	Thale cress	mitochondrion	28.97	27.51
AT1G61870.1	Thale cress	mitochondrion	27.96	27.21
AT3G13160.1	Thale cress	mitochondrion	26.7	26.9
AT1G11630.1	Thale cress	mitochondrion	26.95	26.42
AT3G13150.1	Thale cress	plastid	25.44	18.33

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:844355	ProteinID:AAD55488.1	ProteinID:AEE36363.1	EMBL:AK119070
ArrayExpress:AT1G80150	EnsemblPlantsGene:AT1G80150	RefSeq:AT1G80150	TAIR:AT1G80150	RefSeq:AT1G80150-TAIR-G	EnsemblPlants:AT1G80150.1
TAIR:AT1G80150.1	Unigene:At.33967	EMBL:BT005353	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305
InterPro:IPR002885	InterPro:IPR011990	RefSeq:NP_178132.1	PFAM:PF01535	PFAM:PF12854	PFAM:PF13041
PO:PO:0000293	PO:PO:0009001	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF1623	InterPro:Pentatricopeptide_repeat
UniProt:Q8GW57	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0000163320	:	:

Description

Pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8GW57]

Coordinates

chr1:+:30148330..30150556

Molecular Weight (calculated)

45509.0 Da

IEP (calculated)

9.770

GRAVY (calculated)

-0.121

Length

397 amino acids

Sequence
(BLAST)

001: MLSLRHIRRF CHFPSSAATG IAYVSTESNQ IQGLKPLEEP ALVKLKSERD PEKLYNLFKA NATNRLVIEN RFAFEDTVSR LAGAGRLDFI EDLLEHQKTL
101: PQGRREGFIV RIIMLYGKAG MTKQALDTFF NMDLYGCKRS VKSFNAALQV LSFNPDLHTI WEFLHDAPSK YGIDIDAVSF NIAIKSFCEL GILDGAYMAM
201: REMEKSGLTP DVVTYTTLIS ALYKHERCVI GNGLWNLMVL KGCKPNLTTF NVRIQFLVNR RRAWDANDLL LLMPKLQVEP DSITYNMVIK GFFLARFPDM
301: AERVYTAMHG KGYKPNLKIY QTMIHYLCKA GNFDLAYTMC KDCMRKKWYP NLDTVEMLLK GLVKKGQLDQ AKSIMELVHR RVPPFRSKQL LSLKSIL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.