Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037216.1-P | Field mustard | mitochondrion | 83.01 | 82.82 |
| CDY67618 | Canola | mitochondrion | 83.01 | 82.82 |
| CDY66741 | Canola | mitochondrion | 82.54 | 82.34 |
| AT4G36680.1 | Thale cress | mitochondrion | 66.99 | 67.96 |
| PGSC0003DMT400090439 | Potato | plastid | 56.22 | 57.88 |
| VIT_04s0023g01460.t01 | Wine grape | mitochondrion | 54.07 | 54.59 |
| Solyc02g062910.1.1 | Tomato | plastid | 54.31 | 54.57 |
| PGSC0003DMT400039992 | Potato | cytosol | 52.63 | 53.53 |
| Solyc02g085550.1.1 | Tomato | plastid | 29.9 | 51.02 |
| GSMUA_Achr1P01950_001 | Banana | mitochondrion | 40.19 | 43.52 |
| Solyc02g085650.2.1 | Tomato | plastid | 55.74 | 36.07 |
| Os02t0633200-01 | Rice | mitochondrion | 37.56 | 34.51 |
| Zm00001d017317_P001 | Maize | mitochondrion | 38.28 | 33.97 |
| TraesCS6A01G221200.1 | Wheat | mitochondrion | 37.32 | 33.77 |
| TraesCS6D01G214000.1 | Wheat | mitochondrion | 37.32 | 33.77 |
| EES05467 | Sorghum | mitochondrion | 36.84 | 32.91 |
| TraesCS6B01G260000.1 | Wheat | mitochondrion | 36.36 | 32.9 |
| TraesCS6A01G233500.1 | Wheat | cytosol, mitochondrion | 29.67 | 32.04 |
| HORVU6Hr1G059290.1 | Barley | cytosol | 36.84 | 32.02 |
| AT1G80150.1 | Thale cress | mitochondrion | 27.51 | 28.97 |
| AT1G61870.1 | Thale cress | mitochondrion | 27.75 | 28.43 |
| AT1G55890.1 | Thale cress | mitochondrion | 26.79 | 28.14 |
| AT3G13160.1 | Thale cress | mitochondrion | 24.16 | 25.63 |
| AT1G11630.1 | Thale cress | mitochondrion | 24.4 | 25.19 |
| AT3G13150.1 | Thale cress | plastid | 23.92 | 18.15 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:816367 | UniProt:A0A178VLM8 | ProteinID:AAD12215.1 | ProteinID:AEC06777.1 |
| ArrayExpress:AT2G18520 | EnsemblPlantsGene:AT2G18520 | RefSeq:AT2G18520 | TAIR:AT2G18520 | RefSeq:AT2G18520-TAIR-G | EnsemblPlants:AT2G18520.1 |
| TAIR:AT2G18520.1 | EMBL:AY088617 | Unigene:At.64940 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0080156 | GO:GO:0090305 |
| InterPro:IPR002885 | InterPro:IPR011990 | RefSeq:NP_565439.1 | ProteinID:OAP07317.1 | PFAM:PF01535 | PFAM:PF12854 |
| PFAM:PF13041 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007064 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF506 | InterPro:Pentatricopeptide_repeat |
| UniProt:Q9ZU67 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI00000A11F4 | SEG:seg | : |
Description
Pentatricopeptide repeat-containing protein At2g18520, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU67]
Coordinates
chr2:-:8033832..8035412
Molecular Weight (calculated)
47330.3 Da
IEP (calculated)
9.258
GRAVY (calculated)
-0.366
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSRLYLRF LRRFSTATGI DSQTTAYPGA ITMSKAKSKL RKVQDPDKAL AIYKSVSNNS TSPLSSRYAM ELTVQRLAKS QRFSDIEALI ESHKNNPKIK
101: TETFLSTLIR SYGRASMFDH AMKMFEEMDK LGTPRTVVSF NALLAACLHS DLFERVPQLF DEFPQRYNNI TPDKISYGML IKSYCDSGKP EKAMEIMRDM
201: EVKGVEVTII AFTTILGSLY KNGLVDEAES LWIEMVNKGC DLDNTVYNVR LMNAAKESPE RVKELMEEMS SVGLKPDTVS YNYLMTAYCV KGMMSEAKKV
301: YEGLEQPNAA TFRTLIFHLC INGLYDQGLT VFKKSAIVHK IPDFKTCKHL TEGLVKNNRM EDARGVARIV KKKFPPRLVT EWKKLEEKLG LYSKGNAAAV
401: SSSSQTREVL DQEREDDV
101: TETFLSTLIR SYGRASMFDH AMKMFEEMDK LGTPRTVVSF NALLAACLHS DLFERVPQLF DEFPQRYNNI TPDKISYGML IKSYCDSGKP EKAMEIMRDM
201: EVKGVEVTII AFTTILGSLY KNGLVDEAES LWIEMVNKGC DLDNTVYNVR LMNAAKESPE RVKELMEEMS SVGLKPDTVS YNYLMTAYCV KGMMSEAKKV
301: YEGLEQPNAA TFRTLIFHLC INGLYDQGLT VFKKSAIVHK IPDFKTCKHL TEGLVKNNRM EDARGVARIV KKKFPPRLVT EWKKLEEKLG LYSKGNAAAV
401: SSSSQTREVL DQEREDDV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.