Factsheet for Os02t0633200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G233500.1	Wheat	cytosol, mitochondrion	59.56	70.03
TraesCS6A01G221200.1	Wheat	mitochondrion	70.99	69.91
TraesCS6D01G214000.1	Wheat	mitochondrion	70.77	69.7
TraesCS6B01G260000.1	Wheat	mitochondrion	70.33	69.26
HORVU6Hr1G059290.1	Barley	cytosol	70.33	66.53
Zm00001d017317_P001	Maize	mitochondrion	67.03	64.76
EES05467	Sorghum	mitochondrion	65.05	63.25
GSMUA_Achr1P01950_001	Banana	mitochondrion	38.24	45.08
Bra010568.1-P	Field mustard	mitochondrion	34.51	38.57
CDY24774	Canola	mitochondrion	34.51	38.57
AT4G36680.1	Thale cress	mitochondrion	34.73	38.35
CDY35471	Canola	mitochondrion	34.29	38.33
VIT_04s0023g01460.t01	Wine grape	mitochondrion	34.73	38.16
Bra037216.1-P	Field mustard	mitochondrion	34.95	37.95
CDY66741	Canola	mitochondrion	34.73	37.71
CDY67618	Canola	mitochondrion	34.73	37.71
PGSC0003DMT400090439	Potato	plastid	33.63	37.68
AT2G18520.1	Thale cress	mitochondrion	34.51	37.56
Solyc02g062910.1.1	Tomato	plastid	33.19	36.3
PGSC0003DMT400039992	Potato	cytosol	31.87	35.28
Solyc02g085550.1.1	Tomato	plastid	16.92	31.43
Os01t0793200-01	Rice	mitochondrion	24.4	28.46
Os10t0484900-00	Rice	mitochondrion	26.37	28.04
Solyc02g085650.2.1	Tomato	plastid	36.26	25.54
Os01t0785700-01	Rice	mitochondrion	23.74	24.88
Os08t0499800-01	Rice	mitochondrion	23.96	24.61
Os02t0829800-01	Rice	mitochondrion	21.76	23.4
Os10t0485000-01	Rice	cytosol	15.38	6.49

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:4330066	EMBL:AK063500	ProteinID:BAD25302.1	ProteinID:BAF09422.1
ProteinID:BAS79922.1	ProteinID:EAZ23908.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987
GO:GO:0016787	GO:GO:0043231	GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	EnsemblPlantsGene:Os02g0633200
EnsemblPlants:Os02t0633200-01	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF1042
InterPro:Pentatricopeptide_repeat	UniProt:Q6H7J7	SUPFAM:SSF81901	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00003B4408
RefSeq:XP_015625521.1	SEG:seg	:	:	:	:

Description

Pentatricopeptide repeat domain containing protein. (Os02t0633200-01)

Coordinates

chr2:+:25392975..25394561

Molecular Weight (calculated)

49857.7 Da

IEP (calculated)

7.328

GRAVY (calculated)

-0.340

Length

455 amino acids

Sequence
(BLAST)

001: MAALASLLLL RRRGGSHAAD ALLRALTTAA GEQPLTASAA KTRLRREHDP DRVVSLFEAI DDASLSASST RHALSLAARR LSRSRRFADA EALLSSHIPA
101: SPTEPQLAAV LCSYAAASLP EKALAAFRSA APSLPSPISP LPFNAVLSVF LRCRRHRRVP VLFDELSKEF SITPDASSYG ILVKAYCMLS KDAKAHEVLD
201: QMRGQGFTPT NSIYTTMIDS MYKQKKMEQA ERLWKQMLES GRKPDQAVYN TKIMHHSLHG KTEDVLEVIA EMEEAGVKPD TITYNFLMTS YCKHGKMETA
301: KELYRSLGEK GCSANAATYK HMMAQLCAHG DLDGALVIFK ESYRSNKVPD FRTMSGLVEG LTKAGRVAEA KNIVAKMKKK FPEQLLSGWM KLEKELGLNS
401: DSGDAGTRAE CISEETPSEA EAAMPKTLEL EDPSSDETEC MAEASTSEEM PRDSA

Best Arabidopsis Sequence Match ( AT4G36680.1 )
(BLAST)

001: MASSRISLRL VRRFASAAAD GTTTAPSSGK ISVSKAKSTL RKEHDPDKAL KIYANVSDHS ASPVSSRYAQ ELTVRRLAKC RRFSDIETLI ESHKNDPKIK
101: EEPFYSTLIR SYGQASMFNH AMRTFEQMDQ YGTPRSAVSF NALLNACLHS KNFDKVPQLF DEIPQRYNKI IPDKISYGIL IKSYCDSGTP EKAIEIMRQM
201: QGKGMEVTTI AFTTILSSLY KKGELEVADN LWNEMVKKGC ELDNAAYNVR IMSAQKESPE RVKELIEEMS SMGLKPDTIS YNYLMTAYCE RGMLDEAKKV
301: YEGLEGNNCA PNAATFRTLI FHLCYSRLYE QGYAIFKKSV YMHKIPDFNT LKHLVVGLVE NKKRDDAKGL IRTVKKKFPP SFLNAWKKLE EELGLYSKTD
401: AFPSSAKEAA AA

Arabidopsis Description

Pentatricopeptide repeat-containing protein At4g36680, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M065]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.