Factsheet for Os10t0484900-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G160400.1	Wheat	cytosol	43.22	84.47
TraesCS1B01G176200.1	Wheat	mitochondrion	80.84	81.22
EER91465	Sorghum	mitochondrion	81.78	79.55
Zm00001d032661_P001	Maize	mitochondrion	79.67	77.85
HORVU1Hr1G042520.2	Barley	mitochondrion	79.67	75.78
Zm00001d013990_P001	Maize	mitochondrion, plastid	39.72	66.93
GSMUA_Achr9P20670_001	Banana	cytosol, mitochondrion	31.54	49.27
Os02t0829800-01	Rice	mitochondrion	39.25	39.72
VIT_01s0010g01460.t01	Wine grape	mitochondrion	30.84	34.2
Os02t0633200-01	Rice	mitochondrion	28.04	26.37
Os01t0793200-01	Rice	mitochondrion	22.9	25.13
Os01t0785700-01	Rice	mitochondrion	23.6	23.27
Os08t0499800-01	Rice	mitochondrion	22.9	22.12
Os10t0485000-01	Rice	cytosol	14.02	5.57

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:4348938	ProteinID:AAL59033.1	ProteinID:AAP54340.1	ProteinID:BAT11372.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231
GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	EnsemblPlantsGene:Os10g0484900	EnsemblPlants:Os10t0484900-00	PFAM:PF01535
PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF559	InterPro:Pentatricopeptide_repeat
UniProt:Q8W361	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00000A348E	RefSeq:XP_015614402.1	SEG:seg

Description

Hypothetical conserved gene. (Os10t0484900-00)

Coordinates

chr10:-:18318853..18320476

Molecular Weight (calculated)

46242.9 Da

IEP (calculated)

10.179

GRAVY (calculated)

-0.184

Length

428 amino acids

Sequence
(BLAST)

001: MASLLRRHRH PHPLPAAHLL RRFSALPDVD HPPPPASTPT TPASTRSPIL DLQLAVRGEA DPARIHSLVA TALSRPDDYP RLHGSRPLFS LAASRLARLR
101: RPDLAASLLR ALLDSAPASP GLLARAISLF PGPDDALRAF SDSAPAARSD VSLSALLSAL FRAGRVDDVK STLASAETSF GVAPGRASHN VLLHALVKNS
201: ELAAARKLLG EMAKKLKHRP APDIVSYNTV LAGYSAQGDE EGFEKLLKEI SAKKLEPNVV TYNCRIQWFA KKGETFKGEE LLDAMESKDV APNYLTYNAL
301: VQGYCKEGNV GSAMRVFKRM KVMKRREGRS DLGVSAHSQT YVVLFRSLVE KERLDDALWI CKSCFAMKAA PPFEAVKGLV EGLVKGGKSA EAKDVVAKMN
401: LLVKGDAKVA WEKIAGELSL EGTPSSNP

Best Arabidopsis Sequence Match ( AT1G61870.1 )
(BLAST)

001: MALLSRIRSS TSLFRHLNAS PQIRSLSSAS TILSPDSKTP LTSKEKSKAA LSLLKSEKDP DRILEICRAA SLTPDCRIDR IAFSAAVENL AEKKHFSAVS
101: NLLDGFIENR PDLKSERFAA HAIVLYAQAN MLDHSLRVFR DLEKFEISRT VKSLNALLFA CLVAKDYKEA KRVYIEMPKM YGIEPDLETY NRMIKVFCES
201: GSASSSYSIV AEMERKGIKP NSSSFGLMIS GFYAEDKSDE VGKVLAMMKD RGVNIGVSTY NIRIQSLCKR KKSKEAKALL DGMLSAGMKP NTVTYSHLIH
301: GFCNEDDFEE AKKLFKIMVN RGCKPDSECY FTLIYYLCKG GDFETALSLC KESMEKNWVP SFSIMKSLVN GLAKDSKVEE AKELIGQVKE KFTRNVELWN
401: EVEAALPQ

Arabidopsis Description

PPR336Pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LE47]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.