Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G160400.1 | Wheat | cytosol | 51.17 | 99.54 |
| HORVU1Hr1G042520.2 | Barley | mitochondrion | 95.31 | 90.22 |
| Os10t0484900-00 | Rice | mitochondrion | 81.22 | 80.84 |
| Zm00001d032661_P001 | Maize | mitochondrion | 78.64 | 76.48 |
| EER91465 | Sorghum | mitochondrion | 78.17 | 75.68 |
| Zm00001d013990_P001 | Maize | mitochondrion, plastid | 39.67 | 66.54 |
| GSMUA_Achr9P20670_001 | Banana | cytosol, mitochondrion | 30.05 | 46.72 |
| TraesCS6B01G473500.1 | Wheat | mitochondrion | 36.38 | 36.64 |
| VIT_01s0010g01460.t01 | Wine grape | mitochondrion | 30.28 | 33.42 |
| TraesCS3B01G355800.1 | Wheat | mitochondrion | 24.41 | 26.67 |
| TraesCS6B01G260000.1 | Wheat | mitochondrion | 26.06 | 24.03 |
| TraesCS3B01G361800.1 | Wheat | plastid | 24.18 | 23.46 |
| TraesCS7B01G136500.1 | Wheat | endoplasmic reticulum, plastid | 22.54 | 21.57 |
| TraesCS3B01G353300.1 | Wheat | plastid | 20.66 | 21.05 |
| TraesCS3B01G353500.1 | Wheat | plastid | 23.0 | 19.48 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G176200.1 | EnsemblPlantsGene:TraesCS1B01G176200 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF559 |
| PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 | PFscan:PS51375 | SEG:seg | TIGRFAMs:TIGR00756 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:317583151..317584431
Molecular Weight (calculated)
46348.8 Da
IEP (calculated)
9.611
GRAVY (calculated)
-0.157
Length
426 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLLRRRHP HPSAVSAHLL RRFSALPDVD PSPAFGPARA AARASIIDLQ LAVRAETDPD RVHSLVASAL SSPDYHRLHT SRDLFSLAAS RLDRLHRPDL
101: AASLLDQLLA SAPVSPGLLA RALSLFPGPD DAVRAFSSSA PAARSDVSLS ALLSALLRAG RIDDLKSTFK SAESSLGVAP GCASHNVLLH ALVKSSELPA
201: ARKLLNEMAK KKFKHRPPPD IISYNTLLAG FSEQDDAEEF EKLLKEINEN KLEPNVVTYN CRMRWFARKG ETFKGEELLD VMESKGVLPN YVTYNALVQG
301: YCKEGNVGAA MRVFKRMKVM KRREGRSDLG VSVHSQTYVL LFKSLVEKER LDDALWLCNS CFAMKAAPSF EAVKGLVEGL VKGGRSAEAK GVVAKMNFLV
401: KGDAKVAWEK IAGELSLEEG APSSDP
101: AASLLDQLLA SAPVSPGLLA RALSLFPGPD DAVRAFSSSA PAARSDVSLS ALLSALLRAG RIDDLKSTFK SAESSLGVAP GCASHNVLLH ALVKSSELPA
201: ARKLLNEMAK KKFKHRPPPD IISYNTLLAG FSEQDDAEEF EKLLKEINEN KLEPNVVTYN CRMRWFARKG ETFKGEELLD VMESKGVLPN YVTYNALVQG
301: YCKEGNVGAA MRVFKRMKVM KRREGRSDLG VSVHSQTYVL LFKSLVEKER LDDALWLCNS CFAMKAAPSF EAVKGLVEGL VKGGRSAEAK GVVAKMNFLV
401: KGDAKVAWEK IAGELSLEEG APSSDP
001: MALLSRIRSS TSLFRHLNAS PQIRSLSSAS TILSPDSKTP LTSKEKSKAA LSLLKSEKDP DRILEICRAA SLTPDCRIDR IAFSAAVENL AEKKHFSAVS
101: NLLDGFIENR PDLKSERFAA HAIVLYAQAN MLDHSLRVFR DLEKFEISRT VKSLNALLFA CLVAKDYKEA KRVYIEMPKM YGIEPDLETY NRMIKVFCES
201: GSASSSYSIV AEMERKGIKP NSSSFGLMIS GFYAEDKSDE VGKVLAMMKD RGVNIGVSTY NIRIQSLCKR KKSKEAKALL DGMLSAGMKP NTVTYSHLIH
301: GFCNEDDFEE AKKLFKIMVN RGCKPDSECY FTLIYYLCKG GDFETALSLC KESMEKNWVP SFSIMKSLVN GLAKDSKVEE AKELIGQVKE KFTRNVELWN
401: EVEAALPQ
101: NLLDGFIENR PDLKSERFAA HAIVLYAQAN MLDHSLRVFR DLEKFEISRT VKSLNALLFA CLVAKDYKEA KRVYIEMPKM YGIEPDLETY NRMIKVFCES
201: GSASSSYSIV AEMERKGIKP NSSSFGLMIS GFYAEDKSDE VGKVLAMMKD RGVNIGVSTY NIRIQSLCKR KKSKEAKALL DGMLSAGMKP NTVTYSHLIH
301: GFCNEDDFEE AKKLFKIMVN RGCKPDSECY FTLIYYLCKG GDFETALSLC KESMEKNWVP SFSIMKSLVN GLAKDSKVEE AKELIGQVKE KFTRNVELWN
401: EVEAALPQ
Arabidopsis Description
PPR336Pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LE47]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.