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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G331600.1 Wheat plastid 93.17 89.11
TraesCS3D01G325200.1 Wheat plastid 84.74 82.85
HORVU6Hr1G019320.1 Barley plastid 79.04 74.78
TraesCS3B01G353300.1 Wheat plastid 64.46 67.7
TraesCS3B01G353500.1 Wheat plastid 71.07 62.03
Os01t0785700-01 Rice mitochondrion 56.49 57.14
EES01580 Sorghum mitochondrion 53.08 53.08
Zm00001d012606_P001 Maize mitochondrion 54.44 52.76
EES01579 Sorghum mitochondrion 51.25 52.45
EER95222 Sorghum mitochondrion 53.76 47.87
GSMUA_Achr10P... Banana mitochondrion 41.23 45.14
VIT_00s0274g00040.t01 Wine grape mitochondrion 32.12 36.91
VIT_00s0271g00080.t01 Wine grape mitochondrion 29.84 36.09
VIT_00s0271g00040.t01 Wine grape cytosol 16.63 35.78
KRH41973 Soybean nucleus 30.07 34.65
VIT_00s0271g00050.t01 Wine grape mitochondrion 17.77 34.36
VIT_00s0271g00070.t01 Wine grape mitochondrion 29.61 34.3
Solyc03g031460.1.1 Tomato plastid 28.93 33.51
PGSC0003DMT400012953 Potato cytosol 28.93 33.51
KRH49916 Soybean cytosol 30.3 33.25
Bra039373.1-P Field mustard cytosol 20.73 33.21
CDY08267 Canola mitochondrion 29.16 32.24
Bra037096.1-P Field mustard mitochondrion 29.16 32.24
PGSC0003DMT400055888 Potato mitochondrion 27.56 32.1
CDY26081 Canola mitochondrion 28.93 32.07
CDY24208 Canola mitochondrion 28.7 31.98
CDY43367 Canola mitochondrion 28.25 31.47
AT1G55890.1 Thale cress mitochondrion 28.25 31.16
PGSC0003DMT400055889 Potato plastid 27.56 30.79
AT3G13160.1 Thale cress mitochondrion 27.56 30.71
CDX82550 Canola mitochondrion 27.33 30.53
Solyc02g079830.1.1 Tomato mitochondrion 27.79 30.5
CDY66550 Canola mitochondrion 20.73 30.43
Bra001492.1-P Field mustard mitochondrion 27.33 30.0
Solyc02g079820.2.1 Tomato cytosol, plastid 21.18 29.71
PGSC0003DMT400071165 Potato extracellular 11.39 28.41
TraesCS3B01G355800.1 Wheat mitochondrion 24.37 27.44
CDY43368 Canola plastid 25.74 25.74
CDY24210 Canola plastid 25.51 25.57
TraesCS6B01G473500.1 Wheat mitochondrion 24.37 25.3
TraesCS1B01G176200.1 Wheat mitochondrion 23.46 24.18
Bra039372.1-P Field mustard cytosol, plastid 25.74 23.64
TraesCS6B01G260000.1 Wheat mitochondrion 23.23 22.08
TraesCS7B01G136500.1 Wheat endoplasmic reticulum, plastid 22.32 22.02
AT3G13150.1 Thale cress plastid 25.97 20.69
Protein Annotations
EnsemblPlants:TraesCS3B01G361800.1EnsemblPlantsGene:TraesCS3B01G361800Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015PANTHER:PTHR24015:SF1622
PFAM:PF01535PFAM:PF13041PFscan:PS51375SEG:segSUPFAM:SSF48452TIGRFAMs:TIGR00756
MapMan:35.1:::::
Description
No Description!
Coordinates
chr3B:+:573467780..573469099
Molecular Weight (calculated)
48044.7 Da
IEP (calculated)
9.705
GRAVY (calculated)
-0.319
Length
439 amino acids
Sequence
(BLAST)
001: MSSLAAAAAA AAAAASTWVK SLSRIISSST PAVKPPKRNP KTKPAPPAAD ADSIADQKLT KPLGGVLKAL IREQDPDKLV SKFVEASSAS SRFRDGRRVY
101: DVAVSRLTSL GRKDGIEAII DAQKPFLETS TEGFATRLIR LYGSASMPSH AAATFHQLPA RHKSTMTFNA VLAAYAKAGD VDALTAAFQE IPAAHPSIVP
201: DLYSYNTLIR TLCQKSKLSA ALDAVHLMKK HGVSPDIITF NSLLDGFHNS GRNDEAEAVW EMIKERNMEP DAKCYNAKLR GLVAHGRIDD AAAVLERLEK
301: DGPKTNIVSY NELILGYCKA GRFQEAKKVY GNLMKNECVP NKGTYETLVP HLVQAGELDC ALRYCYEIFA NKKCCGVECG VLQDVVNALV NASRVKEATK
401: LVELGQKSNY HRKYYHLKLM RKNQYQKKRS VKVEDGTEK
Best Arabidopsis Sequence Match ( AT1G55890.1 )
(BLAST)
001: MSSLSRVLRG TFNTCPIRRF SSAATVVSEP TAVTAAISPP QKSLTSLVNG ERNPKRIVEK FKKACESERF RTNIAVYDRT VRRLVAAKRL HYVEEILEEQ
101: KKYRDMSKEG FAARIISLYG KAGMFENAQK VFEEMPNRDC KRSVLSFNAL LSAYRLSKKF DVVEELFNEL PGKLSIKPDI VSYNTLIKAL CEKDSLPEAV
201: ALLDEIENKG LKPDIVTFNT LLLSSYLKGQ FELGEEIWAK MVEKNVAIDI RTYNARLLGL ANEAKSKELV NLFGELKASG LKPDVFSFNA MIRGSINEGK
301: MDEAEAWYKE IVKHGYRPDK ATFALLLPAM CKAGDFESAI ELFKETFSKR YLVGQTTLQQ LVDELVKGSK REEAEEIVKI AKTNDFLKLK LNLPSQEE
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g55890, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LG23]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.