Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010568.1-P | Field mustard | mitochondrion | 76.7 | 77.64 |
| CDY24774 | Canola | mitochondrion | 76.7 | 77.64 |
| CDY35471 | Canola | mitochondrion | 76.21 | 77.15 |
| AT2G18520.1 | Thale cress | mitochondrion | 67.96 | 66.99 |
| VIT_04s0023g01460.t01 | Wine grape | mitochondrion | 61.65 | 61.35 |
| PGSC0003DMT400090439 | Potato | plastid | 58.98 | 59.85 |
| PGSC0003DMT400039992 | Potato | cytosol | 56.55 | 56.69 |
| Solyc02g062910.1.1 | Tomato | plastid | 56.8 | 56.25 |
| Solyc02g085550.1.1 | Tomato | plastid | 32.52 | 54.69 |
| GSMUA_Achr1P01950_001 | Banana | mitochondrion | 39.08 | 41.71 |
| Solyc02g085650.2.1 | Tomato | plastid | 58.98 | 37.62 |
| Os02t0633200-01 | Rice | mitochondrion | 38.35 | 34.73 |
| TraesCS6A01G221200.1 | Wheat | mitochondrion | 36.41 | 32.47 |
| TraesCS6D01G214000.1 | Wheat | mitochondrion | 36.41 | 32.47 |
| Zm00001d017317_P001 | Maize | mitochondrion | 36.65 | 32.06 |
| TraesCS6B01G260000.1 | Wheat | mitochondrion | 35.92 | 32.03 |
| TraesCS6A01G233500.1 | Wheat | cytosol, mitochondrion | 29.85 | 31.78 |
| EES05467 | Sorghum | mitochondrion | 35.44 | 31.2 |
| HORVU6Hr1G059290.1 | Barley | cytosol | 36.41 | 31.18 |
| AT1G80150.1 | Thale cress | mitochondrion | 29.37 | 30.48 |
| AT1G61870.1 | Thale cress | mitochondrion | 28.64 | 28.92 |
| AT1G55890.1 | Thale cress | mitochondrion | 27.18 | 28.14 |
| AT3G13160.1 | Thale cress | mitochondrion | 26.21 | 27.41 |
| AT1G11630.1 | Thale cress | mitochondrion | 26.7 | 27.16 |
| AT3G13150.1 | Thale cress | plastid | 23.79 | 17.79 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:829821 | UniProt:A0A178V2Z3 | ProteinID:AEE86686.1 | EMBL:AJ002597 |
| ArrayExpress:AT4G36680 | EnsemblPlantsGene:AT4G36680 | RefSeq:AT4G36680 | TAIR:AT4G36680 | RefSeq:AT4G36680-TAIR-G | EnsemblPlants:AT4G36680.1 |
| TAIR:AT4G36680.1 | EMBL:AY064155 | Unigene:At.27468 | EMBL:BT001003 | ProteinID:CAB16807.1 | ProteinID:CAB80334.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0080156 | GO:GO:0090305 | InterPro:IPR002885 | InterPro:IPR011990 | RefSeq:NP_195386.1 |
| ProteinID:OAO99432.1 | PFAM:PF01535 | PFAM:PF13041 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007057 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF506 |
| InterPro:Pentatricopeptide_repeat | UniProt:Q9M065 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI00000AC66B | SEG:seg |
Description
Pentatricopeptide repeat-containing protein At4g36680, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M065]
Coordinates
chr4:-:17292229..17293925
Molecular Weight (calculated)
46550.0 Da
IEP (calculated)
9.501
GRAVY (calculated)
-0.456
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSRISLRL VRRFASAAAD GTTTAPSSGK ISVSKAKSTL RKEHDPDKAL KIYANVSDHS ASPVSSRYAQ ELTVRRLAKC RRFSDIETLI ESHKNDPKIK
101: EEPFYSTLIR SYGQASMFNH AMRTFEQMDQ YGTPRSAVSF NALLNACLHS KNFDKVPQLF DEIPQRYNKI IPDKISYGIL IKSYCDSGTP EKAIEIMRQM
201: QGKGMEVTTI AFTTILSSLY KKGELEVADN LWNEMVKKGC ELDNAAYNVR IMSAQKESPE RVKELIEEMS SMGLKPDTIS YNYLMTAYCE RGMLDEAKKV
301: YEGLEGNNCA PNAATFRTLI FHLCYSRLYE QGYAIFKKSV YMHKIPDFNT LKHLVVGLVE NKKRDDAKGL IRTVKKKFPP SFLNAWKKLE EELGLYSKTD
401: AFPSSAKEAA AA
101: EEPFYSTLIR SYGQASMFNH AMRTFEQMDQ YGTPRSAVSF NALLNACLHS KNFDKVPQLF DEIPQRYNKI IPDKISYGIL IKSYCDSGTP EKAIEIMRQM
201: QGKGMEVTTI AFTTILSSLY KKGELEVADN LWNEMVKKGC ELDNAAYNVR IMSAQKESPE RVKELIEEMS SMGLKPDTIS YNYLMTAYCE RGMLDEAKKV
301: YEGLEGNNCA PNAATFRTLI FHLCYSRLYE QGYAIFKKSV YMHKIPDFNT LKHLVVGLVE NKKRDDAKGL IRTVKKKFPP SFLNAWKKLE EELGLYSKTD
401: AFPSSAKEAA AA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.