Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97972 | Canola | cytosol | 50.62 | 73.48 |
| Bra019842.1-P | Field mustard | cytosol | 50.62 | 73.48 |
| CDY49792 | Canola | plastid | 73.83 | 73.28 |
| AT1G61870.1 | Thale cress | mitochondrion | 70.37 | 69.85 |
| VIT_10s0116g00030.t01 | Wine grape | plastid | 55.06 | 56.31 |
| GSMUA_Achr11P... | Banana | cytosol | 25.43 | 52.82 |
| KRH11411 | Soybean | nucleus | 49.88 | 52.06 |
| Solyc10g005280.1.1 | Tomato | mitochondrion | 49.88 | 50.25 |
| VIT_10s0116g00090.t01 | Wine grape | mitochondrion | 31.36 | 49.8 |
| PGSC0003DMT400029367 | Potato | mitochondrion | 49.38 | 49.75 |
| GSMUA_Achr6P00410_001 | Banana | mitochondrion | 41.98 | 48.3 |
| KRH20872 | Soybean | mitochondrion | 20.74 | 47.73 |
| KRH20873 | Soybean | cytosol, mitochondrion | 13.83 | 44.09 |
| Os01t0793200-01 | Rice | mitochondrion | 41.48 | 43.08 |
| TraesCS3D01G319900.1 | Wheat | mitochondrion | 35.56 | 42.6 |
| EES01589 | Sorghum | mitochondrion | 41.23 | 42.6 |
| TraesCS3A01G326500.1 | Wheat | mitochondrion | 40.99 | 42.56 |
| Zm00001d043225_P001 | Maize | mitochondrion | 40.99 | 42.24 |
| TraesCS3B01G355800.1 | Wheat | mitochondrion | 40.49 | 42.05 |
| HORVU3Hr1G077780.1 | Barley | mitochondrion | 40.0 | 41.54 |
| AT3G13160.1 | Thale cress | mitochondrion | 26.42 | 27.16 |
| AT1G80150.1 | Thale cress | mitochondrion | 26.42 | 26.95 |
| AT4G36680.1 | Thale cress | mitochondrion | 27.16 | 26.7 |
| HORVU5Hr1G041750.1 | Barley | cytosol | 23.21 | 26.48 |
| AT1G55890.1 | Thale cress | mitochondrion | 24.94 | 25.38 |
| AT2G18520.1 | Thale cress | mitochondrion | 25.19 | 24.4 |
| AT3G13150.1 | Thale cress | plastid | 26.91 | 19.78 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:17.7.1.3.2 | EntrezGene:837707 | UniProt:A0A178WI47 | ProteinID:AAD30260.1 | ProteinID:AEE28763.1 |
| EMBL:AF385742 | ArrayExpress:AT1G11630 | EnsemblPlantsGene:AT1G11630 | RefSeq:AT1G11630 | TAIR:AT1G11630 | RefSeq:AT1G11630-TAIR-G |
| EnsemblPlants:AT1G11630.1 | TAIR:AT1G11630.1 | EMBL:AY081736 | EMBL:AY087752 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0090305 |
| InterPro:IPR002885 | InterPro:IPR011990 | RefSeq:NP_172629.1 | ProteinID:OAP17774.1 | PFAM:PF13041 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF579 | InterPro:Pentatricopeptide_repeat | UniProt:Q9SAB4 | TIGRFAMs:TIGR00756 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI000009E1A2 | SEG:seg | : | : | : |
Description
Pentatricopeptide repeat-containing protein At1g11630, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB4]
Coordinates
chr1:-:3912754..3914465
Molecular Weight (calculated)
46391.5 Da
IEP (calculated)
8.275
GRAVY (calculated)
-0.140
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFLFRIRTS EFILQKATQF RLKSSSSSIF TLKSLTSKQK KSRDTLSLLK SENNPDRILE ICRSTSLSPD YHVDRIIFSV AVVTLAREKH FVAVSQLLDG
101: FIQNQPDPKS ESFAVRAIIL YGRANMLDRS IQTFRNLEQY EIPRTVKSLN ALLFACLMAK DYKEANRVYL EMPKMYGIEP DLETYNRMIR VLCESGSTSS
201: SYSIVAEMER KWIKPTAASF GLMIDGFYKE EKFDEVRKVM RMMDEFGVHV GVATYNIMIQ CLCKRKKSAE AKALIDGVMS CRMRPNSVTY SLLIHGFCSE
301: ENLDEAMNLF EVMVCNGYKP DSECYFTLIH CLCKGGDFET ALILCRESME KNWVPSFSVM KWLVNGLASR SKVDEAKELI AVVKEKFTRN VDLWNEVEAA
401: LPLPQ
101: FIQNQPDPKS ESFAVRAIIL YGRANMLDRS IQTFRNLEQY EIPRTVKSLN ALLFACLMAK DYKEANRVYL EMPKMYGIEP DLETYNRMIR VLCESGSTSS
201: SYSIVAEMER KWIKPTAASF GLMIDGFYKE EKFDEVRKVM RMMDEFGVHV GVATYNIMIQ CLCKRKKSAE AKALIDGVMS CRMRPNSVTY SLLIHGFCSE
301: ENLDEAMNLF EVMVCNGYKP DSECYFTLIH CLCKGGDFET ALILCRESME KNWVPSFSVM KWLVNGLASR SKVDEAKELI AVVKEKFTRN VDLWNEVEAA
401: LPLPQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.