Factsheet for HORVU3Hr1G077780.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G326500.1	Wheat	mitochondrion	96.15	96.15
TraesCS3D01G319900.1	Wheat	mitochondrion	83.08	95.86
TraesCS3B01G355800.1	Wheat	mitochondrion	95.64	95.64
Os01t0793200-01	Rice	mitochondrion	82.31	82.31
EES01589	Sorghum	mitochondrion	81.79	81.38
Zm00001d043225_P001	Maize	mitochondrion	80.0	79.39
HORVU5Hr1G041750.1	Barley	cytosol	60.77	66.76
GSMUA_Achr6P00410_001	Banana	mitochondrion	53.08	58.81
KRH11411	Soybean	nucleus	48.21	48.45
CDY07260	Canola	cytosol	18.21	46.41
VIT_10s0116g00030.t01	Wine grape	plastid	46.41	45.71
KRH20872	Soybean	mitochondrion	20.26	44.89
VIT_10s0116g00090.t01	Wine grape	mitochondrion	29.23	44.71
Solyc10g005280.1.1	Tomato	mitochondrion	44.87	43.53
PGSC0003DMT400029367	Potato	mitochondrion	44.87	43.53
CDY25328	Canola	mitochondrion, plastid	45.38	43.38
Bra028380.1-P	Field mustard	mitochondrion	45.38	43.38
CDY47165	Canola	mitochondrion	45.13	43.14
AT1G61870.1	Thale cress	mitochondrion	44.87	42.89
AT1G11630.1	Thale cress	mitochondrion	41.54	40.0
Bra019842.1-P	Field mustard	cytosol	28.21	39.43
CDX97972	Canola	cytosol	28.21	39.43
CDY49792	Canola	plastid	40.0	38.24
KRH20873	Soybean	cytosol, mitochondrion	12.31	37.8
HORVU6Hr1G094400.1	Barley	plastid	28.46	25.58
HORVU3Hr1G077400.1	Barley	cytosol	24.1	24.54
HORVU2Hr1G030800.1	Barley	cytosol, extracellular	14.62	24.46
HORVU3Hr1G101970.1	Barley	cytosol	11.03	23.5
HORVU6Hr1G059290.1	Barley	cytosol	28.97	23.49
HORVU6Hr1G019320.1	Barley	plastid	27.44	23.06
HORVU1Hr1G042520.2	Barley	mitochondrion	25.9	22.44
HORVU6Hr1G047990.1	Barley	cytosol, mitochondrion, plastid	22.05	21.99
HORVU5Hr1G013060.2	Barley	cytosol, mitochondrion, plastid	22.05	21.99
HORVU7Hr1G049150.5	Barley	mitochondrion, plastid	24.1	20.94
HORVU3Hr1G077440.2	Barley	mitochondrion	24.87	19.76
HORVU3Hr1G070290.2	Barley	mitochondrion	19.74	19.44

Protein Annotations

EnsemblPlants:HORVU3Hr1G077780.1	EnsemblPlantsGene:HORVU3Hr1G077780	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF579
PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	SEG:seg	TIGRFAMs:TIGR00756	UniParc:UPI000295C816
UniProt:M0WDZ2	MapMan:17.7.1.3.2	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:574886154..574890042

Molecular Weight (calculated)

42704.6 Da

IEP (calculated)

9.485

GRAVY (calculated)

-0.172

Length

390 amino acids

Sequence
(BLAST)

001: MAAAGRLFLR RRLATAAATP PTPASILNPS SPTTPLTTRQ KTRLAISLLK SSPPPPPDQI LSICRAAALS PKTHLDRVAL SLATSRLSTA PDSLRDLTSS
101: LLIPDHAHHA IVLFGQAGLL PDAISTFQSS PSTRSLNALL FACILAGNHA EAARIFQTFP DAHRVKPNAE TFNSIIKSFS ESGTTRSFYS VFDEMCKQGL
201: KPTATTFTAA IAGFYKEERF DDVEKVIKLM KKHGCGESLQ VYNARVQGLC KLGRNGDAKA LLSEMAKKGT KPSWVTYNHL IYGFCKEGDL EEVKRLYKEM
301: GMKGLVGDSN FYFTVIFHLC KAGDFDTALG VYNEIAPRNW IPCFSTMKML VNGLAGSSRI DEAKGIIEKM KEKFPDRDAG WKEVEEALPQ

Best Arabidopsis Sequence Match ( AT1G61870.1 )
(BLAST)

001: MALLSRIRSS TSLFRHLNAS PQIRSLSSAS TILSPDSKTP LTSKEKSKAA LSLLKSEKDP DRILEICRAA SLTPDCRIDR IAFSAAVENL AEKKHFSAVS
101: NLLDGFIENR PDLKSERFAA HAIVLYAQAN MLDHSLRVFR DLEKFEISRT VKSLNALLFA CLVAKDYKEA KRVYIEMPKM YGIEPDLETY NRMIKVFCES
201: GSASSSYSIV AEMERKGIKP NSSSFGLMIS GFYAEDKSDE VGKVLAMMKD RGVNIGVSTY NIRIQSLCKR KKSKEAKALL DGMLSAGMKP NTVTYSHLIH
301: GFCNEDDFEE AKKLFKIMVN RGCKPDSECY FTLIYYLCKG GDFETALSLC KESMEKNWVP SFSIMKSLVN GLAKDSKVEE AKELIGQVKE KFTRNVELWN
401: EVEAALPQ

Arabidopsis Description

PPR336Pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LE47]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.