Factsheet for HORVU3Hr1G070290.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014711_P001	Maize	cytosol	53.79	75.0
HORVU7Hr1G049150.5	Barley	mitochondrion, plastid	82.58	72.83
TraesCS7B01G136500.1	Wheat	endoplasmic reticulum, plastid	79.8	71.01
Zm00001d006609_P001	Maize	cytosol	55.81	70.83
TraesCS7D01G240000.1	Wheat	endoplasmic reticulum, plastid	79.29	70.56
TraesCS7A01G240900.1	Wheat	mitochondrion, plastid	79.8	70.54
Os08t0499800-01	Rice	mitochondrion	68.94	61.63
Zm00001d031321_P001	Maize	mitochondrion	64.65	55.77
EES15434	Sorghum	plastid	65.15	55.48
CDY54310	Canola	mitochondrion	40.91	41.43
CDY38649	Canola	mitochondrion	40.15	40.98
Bra008492.1-P	Field mustard	mitochondrion	40.15	40.56
CDY37572	Canola	mitochondrion	40.66	40.45
CDY57688	Canola	mitochondrion	39.9	40.41
Bra003553.1-P	Field mustard	mitochondrion	39.65	40.15
AT1G80150.1	Thale cress	mitochondrion	39.9	39.8
PGSC0003DMT400072924	Potato	mitochondrion	40.15	39.26
VIT_09s0002g06540.t01	Wine grape	mitochondrion	40.91	38.39
Solyc05g012250.1.1	Tomato	mitochondrion	40.15	30.87
HORVU3Hr1G101970.1	Barley	cytosol	10.1	21.86
HORVU3Hr1G077400.1	Barley	cytosol	19.95	20.63
HORVU2Hr1G030800.1	Barley	cytosol, extracellular	11.87	20.17
HORVU3Hr1G077780.1	Barley	mitochondrion	19.44	19.74
HORVU6Hr1G094400.1	Barley	plastid	20.96	19.12
HORVU6Hr1G047990.1	Barley	cytosol, mitochondrion, plastid	18.43	18.67
HORVU5Hr1G013060.2	Barley	cytosol, mitochondrion, plastid	18.43	18.67
HORVU6Hr1G059290.1	Barley	cytosol	21.46	17.67
HORVU5Hr1G041750.1	Barley	cytosol	15.66	17.46
HORVU1Hr1G042520.2	Barley	mitochondrion	19.7	17.33
HORVU6Hr1G019320.1	Barley	plastid	19.19	16.38
HORVU3Hr1G077440.2	Barley	mitochondrion	18.94	15.27

Protein Annotations

EnsemblPlants:HORVU3Hr1G070290.2	EnsemblPlantsGene:HORVU3Hr1G070290	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	ncoils:Coil	PANTHER:PTHR24015
PANTHER:PTHR24015:SF1623	PFAM:PF01535	PFAM:PF13041	PFscan:PS51375	SEG:seg	TIGRFAMs:TIGR00756
UniParc:UPI000B470AAB	UniProt:A0A287LJB7	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:531770883..531772233

Molecular Weight (calculated)

41470.0 Da

IEP (calculated)

9.906

GRAVY (calculated)

-0.267

Length

396 amino acids

Sequence
(BLAST)

001: RLPSMPRVLP LSTPCAPWAL SGGVPAHLGA GSHPVLAHVA LWDYRRRPXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXEEILEQHK ALPQGRREGF
101: VIRIIGLYGR ARMPEHALRT FREMEMYGCE RTVKSLNATM KVLMQARLFD DVLRLLDEAS PRYGVELDDI SYNTVVKMAC DMGELHAAYR VMQEMEKEGV
201: RPDVITXXTL MAVFYKNGHR EVGDGLWNLM RLRGCMPTLT SYNVRIQFLI NRRRGWLAND LVRKMYAAGI TPDEITYNLV IKGFFVMGEH EMAKTVFGAM
301: HGRGCKPNER IYQTMVHYLC KRREFNLAFR LCKDSMEKNW FPSVDTIHHL LKGLMVIKKD RNAREIMRLV AERKPSYSVD DVKAFQDILS HGKTGR

Best Arabidopsis Sequence Match ( AT1G61870.1 )
(BLAST)

001: MALLSRIRSS TSLFRHLNAS PQIRSLSSAS TILSPDSKTP LTSKEKSKAA LSLLKSEKDP DRILEICRAA SLTPDCRIDR IAFSAAVENL AEKKHFSAVS
101: NLLDGFIENR PDLKSERFAA HAIVLYAQAN MLDHSLRVFR DLEKFEISRT VKSLNALLFA CLVAKDYKEA KRVYIEMPKM YGIEPDLETY NRMIKVFCES
201: GSASSSYSIV AEMERKGIKP NSSSFGLMIS GFYAEDKSDE VGKVLAMMKD RGVNIGVSTY NIRIQSLCKR KKSKEAKALL DGMLSAGMKP NTVTYSHLIH
301: GFCNEDDFEE AKKLFKIMVN RGCKPDSECY FTLIYYLCKG GDFETALSLC KESMEKNWVP SFSIMKSLVN GLAKDSKVEE AKELIGQVKE KFTRNVELWN
401: EVEAALPQ

Arabidopsis Description

PPR336Pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LE47]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.