Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028380.1-P | Field mustard | mitochondrion | 88.48 | 88.48 |
| CDY25328 | Canola | mitochondrion, plastid | 87.99 | 87.99 |
| CDY47165 | Canola | mitochondrion | 87.75 | 87.75 |
| CDY07260 | Canola | cytosol | 29.66 | 79.08 |
| AT1G11630.1 | Thale cress | mitochondrion | 69.85 | 70.37 |
| VIT_10s0116g00030.t01 | Wine grape | plastid | 62.25 | 64.14 |
| Solyc10g005280.1.1 | Tomato | mitochondrion | 59.07 | 59.95 |
| PGSC0003DMT400029367 | Potato | mitochondrion | 58.33 | 59.2 |
| KRH11411 | Soybean | nucleus | 55.39 | 58.25 |
| GSMUA_Achr11P... | Banana | cytosol | 27.21 | 56.92 |
| VIT_10s0116g00090.t01 | Wine grape | mitochondrion | 35.29 | 56.47 |
| GSMUA_Achr6P00410_001 | Banana | mitochondrion | 46.81 | 54.26 |
| KRH20872 | Soybean | mitochondrion | 22.79 | 52.84 |
| EES01589 | Sorghum | mitochondrion | 46.32 | 48.21 |
| Os01t0793200-01 | Rice | mitochondrion | 45.83 | 47.95 |
| Zm00001d043225_P001 | Maize | mitochondrion | 46.08 | 47.84 |
| TraesCS3A01G326500.1 | Wheat | mitochondrion | 44.36 | 46.41 |
| TraesCS3B01G355800.1 | Wheat | mitochondrion | 43.87 | 45.9 |
| TraesCS3D01G319900.1 | Wheat | mitochondrion | 37.5 | 45.27 |
| KRH20873 | Soybean | cytosol, mitochondrion | 13.97 | 44.88 |
| HORVU3Hr1G077780.1 | Barley | mitochondrion | 42.89 | 44.87 |
| HORVU5Hr1G041750.1 | Barley | cytosol | 25.98 | 29.86 |
| AT4G36680.1 | Thale cress | mitochondrion | 28.92 | 28.64 |
| AT1G80150.1 | Thale cress | mitochondrion | 27.21 | 27.96 |
| AT1G55890.1 | Thale cress | mitochondrion | 27.21 | 27.89 |
| AT2G18520.1 | Thale cress | mitochondrion | 28.43 | 27.75 |
| AT3G13160.1 | Thale cress | mitochondrion | 26.47 | 27.41 |
| AT3G13150.1 | Thale cress | plastid | 27.21 | 20.15 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:17.7.1.3.2 | EntrezGene:842484 | ProteinID:AAC28506.1 | ProteinID:AEE33898.1 | EMBL:AF428391 |
| ArrayExpress:AT1G61870 | EnsemblPlantsGene:AT1G61870 | RefSeq:AT1G61870 | TAIR:AT1G61870 | RefSeq:AT1G61870-TAIR-G | EnsemblPlants:AT1G61870.1 |
| TAIR:AT1G61870.1 | EMBL:AY062858 | EMBL:AY085627 | Unigene:At.23099 | EMBL:BT009692 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009451 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0090305 | InterPro:IPR002885 | InterPro:IPR011990 |
| RefSeq:NP_564786.1 | PFAM:PF01535 | PFAM:PF13041 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007057 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | Symbol:PPR336 | PFscan:PS51375 |
| PANTHER:PTHR24015 | PANTHER:PTHR24015:SF579 | InterPro:Pentatricopeptide_repeat | UniProt:Q8LE47 | SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI00000A1A12 | SEG:seg | : | : | : |
Description
PPR336Pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LE47]
Coordinates
chr1:-:22864951..22866666
Molecular Weight (calculated)
45760.4 Da
IEP (calculated)
8.773
GRAVY (calculated)
-0.255
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLSRIRSS TSLFRHLNAS PQIRSLSSAS TILSPDSKTP LTSKEKSKAA LSLLKSEKDP DRILEICRAA SLTPDCRIDR IAFSAAVENL AEKKHFSAVS
101: NLLDGFIENR PDLKSERFAA HAIVLYAQAN MLDHSLRVFR DLEKFEISRT VKSLNALLFA CLVAKDYKEA KRVYIEMPKM YGIEPDLETY NRMIKVFCES
201: GSASSSYSIV AEMERKGIKP NSSSFGLMIS GFYAEDKSDE VGKVLAMMKD RGVNIGVSTY NIRIQSLCKR KKSKEAKALL DGMLSAGMKP NTVTYSHLIH
301: GFCNEDDFEE AKKLFKIMVN RGCKPDSECY FTLIYYLCKG GDFETALSLC KESMEKNWVP SFSIMKSLVN GLAKDSKVEE AKELIGQVKE KFTRNVELWN
401: EVEAALPQ
101: NLLDGFIENR PDLKSERFAA HAIVLYAQAN MLDHSLRVFR DLEKFEISRT VKSLNALLFA CLVAKDYKEA KRVYIEMPKM YGIEPDLETY NRMIKVFCES
201: GSASSSYSIV AEMERKGIKP NSSSFGLMIS GFYAEDKSDE VGKVLAMMKD RGVNIGVSTY NIRIQSLCKR KKSKEAKALL DGMLSAGMKP NTVTYSHLIH
301: GFCNEDDFEE AKKLFKIMVN RGCKPDSECY FTLIYYLCKG GDFETALSLC KESMEKNWVP SFSIMKSLVN GLAKDSKVEE AKELIGQVKE KFTRNVELWN
401: EVEAALPQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.