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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
 extracellular: 20408568
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 29575040 doi
WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES07814 Sorghum mitochondrion, plastid 92.36 92.36
Os02t0829800-01 Rice mitochondrion 75.89 75.18
TraesCS6B01G473500.1 Wheat mitochondrion 71.36 70.69
TraesCS6D01G401100.1 Wheat mitochondrion 70.88 70.21
HORVU6Hr1G094400.1 Barley plastid 70.17 67.74
HORVU2Hr1G030800.1 Barley cytosol, extracellular 34.84 62.66
HORVU3Hr1G101970.1 Barley cytosol 26.73 61.2
HORVU5Hr1G013060.2 Barley cytosol, mitochondrion, plastid 48.93 52.43
HORVU6Hr1G047990.1 Barley cytosol, mitochondrion, plastid 48.93 52.43
GSMUA_Achr9P20670_001 Banana cytosol, mitochondrion 31.74 48.54
VIT_01s0010g01460.t01 Wine grape mitochondrion 35.08 38.08
Zm00001d032661_P001 Maize mitochondrion 37.95 36.3
Zm00001d013990_P001 Maize mitochondrion, plastid 17.9 29.53
Zm00001d043225_P001 Maize mitochondrion 25.3 26.97
Zm00001d006609_P001 Maize cytosol 20.05 26.92
Zm00001d012606_P001 Maize mitochondrion 26.73 24.72
Zm00001d014711_P001 Maize cytosol 15.27 22.54
Zm00001d031321_P001 Maize mitochondrion 24.58 22.44
Zm00001d017317_P001 Maize mitochondrion 25.06 22.29
Protein Annotations
Gene3D:1.25.40.10EntrezGene:100277111MapMan:35.1ProteinID:AQK76424.1UniProt:B6TPB9EMBL:EU966834
GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR002885InterPro:IPR011990PFAM:PF01535
PFAM:PF13041PFscan:PS51375PANTHER:PTHR24015PANTHER:PTHR24015:SF518InterPro:Pentatricopeptide_repeatTIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sfUniParc:UPI000182DE2DEnsemblPlantsGene:Zm00001d018534EnsemblPlants:Zm00001d018534_P001EnsemblPlants:Zm00001d018534_T001SEG:seg
Description
Pentatricopeptide repeat-containing protein mitochondrial
Coordinates
chr5:-:222575337..222576596
Molecular Weight (calculated)
45558.8 Da
IEP (calculated)
10.259
GRAVY (calculated)
-0.002
Length
419 amino acids
Sequence
(BLAST)
001: MASAAAALYR SPSLLSRRHL LIRLLSTQTQ LVTPPTPTTP ADLSRLKSSI RDAATTPDAL ATLFLSGLPH PAFLADRPLF ALSVHRLASA GRRDLVASVL
101: SSSLTALPSP HPSEGFLLRL ISLYSAAGMP DHSLAVFRLV KPASDRALSA LLSAYHDNRL YDRTVRAFNT LPAELGIKPG LVSHNVLLKA LVASGDVAAA
201: HTLFDEMPDT AGVQPDIVSC NEILKGYLNA GDADAFDRLV KEIAGPKRRL KPNVGTYNLR MALLCSKMRS FEAEELLDVM GANGVPPNRT SFNTVIKGLC
301: NEGEVGAAMA LFKRMPEVPR QHGKGVSPNF ETYIMLLEAL VKKNLFDPAL EICKECLRNK WAPPFQAVKG LVQGLLKSRK AKHAREVFMA MRKAVKGDAK
401: QEWIKVEAQF PMLLADKKA
Best Arabidopsis Sequence Match ( AT1G11630.1 )
(BLAST)
001: MAFLFRIRTS EFILQKATQF RLKSSSSSIF TLKSLTSKQK KSRDTLSLLK SENNPDRILE ICRSTSLSPD YHVDRIIFSV AVVTLAREKH FVAVSQLLDG
101: FIQNQPDPKS ESFAVRAIIL YGRANMLDRS IQTFRNLEQY EIPRTVKSLN ALLFACLMAK DYKEANRVYL EMPKMYGIEP DLETYNRMIR VLCESGSTSS
201: SYSIVAEMER KWIKPTAASF GLMIDGFYKE EKFDEVRKVM RMMDEFGVHV GVATYNIMIQ CLCKRKKSAE AKALIDGVMS CRMRPNSVTY SLLIHGFCSE
301: ENLDEAMNLF EVMVCNGYKP DSECYFTLIH CLCKGGDFET ALILCRESME KNWVPSFSVM KWLVNGLASR SKVDEAKELI AVVKEKFTRN VDLWNEVEAA
401: LPLPQ
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g11630, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB4]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.