Factsheet for Bra006090.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78411	Canola	cytosol	99.42	99.42
AT5G11110.1	Thale cress	cytosol	90.76	90.07
Bra009830.1-P	Field mustard	nucleus	85.27	84.62
VIT_04s0008g05730.t01	Wine grape	cytosol	71.7	70.42
GSMUA_Achr4P06050_001	Banana	cytosol	70.07	68.74
Bra002289.1-P	Field mustard	cytosol	68.72	68.52
GSMUA_Achr9P22510_001	Banana	cytosol	69.3	67.86
Solyc08g042000.2.1	Tomato	nucleus	68.05	67.66
Bra020096.1-P	Field mustard	cytosol	66.51	67.09
Os08t0301500-01	Rice	plasma membrane	66.8	65.1
OQU78428	Sorghum	nucleus	66.41	64.49
Zm00001d050125_P002	Maize	nucleus	65.64	64.4
TraesCS3D01G013000.1	Wheat	nucleus	64.87	63.05
TraesCS3A01G015500.1	Wheat	golgi	64.68	62.75
TraesCSU01G044500.2	Wheat	unclear	64.68	62.45
TraesCS6A01G144800.1	Wheat	cytoskeleton, cytosol, nucleus	56.88	61.31
Zm00001d015570_P002	Maize	cytosol	56.79	61.2
KXG29640	Sorghum	cytosol	56.69	61.1
TraesCS6D01G133800.1	Wheat	cytosol	56.5	60.89
TraesCS7B01G434300.1	Wheat	cytosol	56.59	60.56
TraesCS7D01G508100.1	Wheat	cytosol	56.4	60.35
TraesCS7A01G518200.1	Wheat	cytosol	56.4	60.29
PGSC0003DMT400076855	Potato	cytosol, peroxisome, plastid	30.22	60.15
HORVU3Hr1G002280.1	Barley	plastid	64.58	59.38
Zm00001d036749_P001	Maize	cytosol	55.53	59.18
KXG20466	Sorghum	cytosol	55.25	58.57
Os02t0184400-01	Rice	endoplasmic reticulum, golgi	56.59	58.16
HORVU6Hr1G028330.1	Barley	endoplasmic reticulum, golgi	57.17	57.56
TraesCS6B01G173000.2	Wheat	endoplasmic reticulum, plasma membrane	56.98	56.92
HORVU7Hr1G115590.10	Barley	nucleus	51.68	53.75
Bra015364.1-P	Field mustard	cytosol	43.89	53.4
Bra033195.1-P	Field mustard	cytosol	53.22	52.82
Os06t0643800-01	Rice	plasma membrane	9.34	52.72
Zm00001d046595_P002	Maize	cytosol	49.47	52.56
Zm00001d016399_P002	Maize	extracellular	6.54	43.31
Bra037432.1-P	Field mustard	cytosol	16.55	21.31
Bra036282.1-P	Field mustard	cytosol, mitochondrion	16.27	20.84
Bra002332.1-P	Field mustard	cytosol	15.5	20.48
Bra006578.1-P	Field mustard	cytosol	15.69	20.22
Bra039502.1-P	Field mustard	cytosol	14.92	18.52
Bra003845.1-P	Field mustard	cytosol	15.88	17.55
Bra015995.1-P	Field mustard	cytosol	15.69	17.29

Protein Annotations

KEGG:00500+2.4.1.14	MapMan:3.1.2.7	Gene3D:3.40.50.1000	Gene3D:3.40.50.2000	Gene3D:3.90.1070.10	EnsemblPlantsGene:Bra006090
EnsemblPlants:Bra006090.1	EnsemblPlants:Bra006090.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0005975	GO:GO:0005985	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009653	GO:GO:0009987	GO:GO:0010208	GO:GO:0016020	GO:GO:0016043
GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	GO:GO:0046524	GO:GO:0071836	InterPro:Glyco_trans_1
InterPro:HAD_sf	InterPro:IPR023214	UniProt:M4CPF2	PFAM:PF00534	PFAM:PF00862	PFAM:PF05116
PANTHER:PTHR12526	PANTHER:PTHR12526:SF334	InterPro:SPP_N	InterPro:SPS_C	SUPFAM:SSF53756	InterPro:Sucrose_synth
InterPro:SucrsPsyn_pln	TIGRFAMs:TIGR02468	UniParc:UPI000253F904	SEG:seg	:	:

Description

AT5G11110 (E=0.0) SPS1, ATSPS2F, KNS2 | ATSPS2F (SUCROSE PHOSPHATE SYNTHASE 2F); sucrose-phosphate synthase

Coordinates

chrA03:+:1946332..1950683

Molecular Weight (calculated)

116315.0 Da

IEP (calculated)

6.490

GRAVY (calculated)

-0.394

Length

1039 amino acids

Sequence
(BLAST)

0001: MVGNDWVNSY LEAILAAEPG IGDSKSSLLL RERGHFSPSR YFVEEVITGF DETDLHRSWV QAAATRSPQE RNTRLENLCW RIWNLARQKK KVEGKNAKRA
0101: AKRHLLREKA RKEVTADMSE DFSEGEKADV PGEIPTLSDG NTKGRMSRVS SVDVFENWFA QHKEKKLYIV LISLHGLIRG ENMELGRDSD TGGQVKYVVE
0201: LARALASMPG VYRVDLLTRQ VTAPDVDSSY SEPTEMLNPL DTDSTEQEHG ESSGAYIVRI PFGPKDKYVP KELLWPHIPE FVDRALSYIM KISKALDEEI
0301: FEGGGGQVWP VSIHGHYADA GDSAALLSGA LNVPMVFTGH SLGRDKLEQL LKQGRPKEEI NANYKIMRRI EAEELCLDAS EIIITSTKQE IEEQWRLYDG
0401: FDPVLERKLR ARMIRGVSCL GRFMPRTVVI PPGMEFHHIV PHDVDADGDD EDPQSPDPPI WSEIMRFFSN PRKPMILALA RPDPKKNLVT LVKAFGECRP
0501: LRELANLTLI MGNRNDIDEL STTNSSVLLS ILKLIDKYDL YGQVAMPKHH KQSDVPEIYR LAAKTKGVFI NPAFIEPFGL TLIEAGAHGL PTVATINGGP
0601: VDIHRVLDNG LLVDPHDQQA ISDALLKLVS DKHLWTRCRQ NGLKNIHLFS WPEHCKTYLA RIASCKQRSP KWQRVEFENS DADSPSDSLR DIHDISLNLK
0701: LSLDGEKSSV DTNLDAEDTT TAERKAKLEK AVSTVSQKKI SNEKIDSKMP TLKRRKHIFV ISVDCSTNSD LLSVVKTVMD VAGDSTGFIL STSMTVSETH
0801: TTLLSGGLKP QDFDAVICNS GSELYFTASA SSEDNKTVLP YTHDPDYHSH IEFRWGGENL RKTLIRWISS VEEKKKMKQG EILSEDEASS TNYCLSFKVK
0901: DPASIPPMKE LRKLMRIQAL RCNVVYCQNG ARLNVIPVLA SRSQALRYLL VRWGIDLSNM VVFVGDSGDT DYEGLLGGVH KTVILKGIAS DLRELHGNRS
1001: YPMEDVTPLN SPNITEAEEC GCDAIKVALE KLGINLRKP

Best Arabidopsis Sequence Match ( AT5G11110.1 )
(BLAST)

0001: MVGNDWVNSY LEAILAAEPG IANSKPPGTG DSKSSLLLRE RGHFSPTRYF VEEVITGFDE TDLHRSWVQA AATRSPQERN TRLENLCWRI WNLARQKKQV
0101: EGKNAKREAK REREREKARR EVTAEMSEDF SEGEKADLPG EIPTPSDNNT KGRMSRISSV DVFENWFAQH KEKKLYIVLI SLHGLIRGEN MELGRDSDTG
0201: GQVKYVVELA RALGSMPGVY RVDLLTRQVT APDVDSSYSE PSEMLNPIDT DIEQENGESS GAYIIRIPFG PKDKYVPKEL LWPHIPEFVD RALSHIMQIS
0301: KVLGEQIGGG QQVWPVSIHG HYADAGDSTA LLSGALNVPM VFTGHSLGRD KLEQLLKQGR PKEEINSNYK IWRRIEAEEL CLDASEIVIT STRQEVDEQW
0401: RLYDGFDPVL ERKLRARMKR GVSCLGRFMP RMVVIPPGME FHHIVPHDVD ADGDDENPQT ADPPIWSEIM RFFSNPRKPM ILALARPDPK KNLVTLVKAF
0501: GECRPLRELA NLTLIMGNRN DIDELSSTNS SVLLSILKLI DKYDLYGQVA MPKHHQQSDV PEIYRLAAKT KGVFINPAFI EPFGLTLIEA GAHGLPTVAT
0601: INGGPVDIHR VLDNGLLVDP HDQQAIADAL LKLVSDRQLW GRCRQNGLNN IHLFSWPEHC KTYLARIASC KQRHPKWQRV EFENSDSDSP SDSLRDINDI
0701: SLNLKLSLDG EKSGSNNGVD TNLDAEDRAA ERKAEVEKAV STLAQKSKPT EKFDSKMPTL KRRKNIFVIS VDCSATSDLL AVVKTVIDAA GRGSSTGFIL
0801: STSMTISETH TALLSGGLKP QDFDAVICSS GSELYFTSSG SEDKTALPYT LDADYHSHIE FRWGGESLRK TLIRWISSVE EKKKTKKGEI LVEDESSSTN
0901: YCLSFKVKDP ALMPPMKELR KLMRNQALRC NAVYCQNGAR LNVIPVLASR SQALRYLLVR WGIDLSNMVV FVGDSGDTDY EGLLGGIHKT VILKGLASDL
1001: REQPGNRSYP MEDVTPLNSP NITEAKECGR DAIKVALEKL GISLLKP

Arabidopsis Description

SPS2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8QNB0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.