Subcellular Localization
min:
: max
Winner_takes_all: unclear
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
unclear:
25769308
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G013000.1 | Wheat | nucleus | 98.23 | 98.88 |
| TraesCS3A01G015500.1 | Wheat | golgi | 97.77 | 98.23 |
| HORVU3Hr1G002280.1 | Barley | plastid | 96.19 | 91.59 |
| Os08t0301500-01 | Rice | plasma membrane | 87.17 | 87.99 |
| Zm00001d050125_P002 | Maize | nucleus | 83.83 | 85.17 |
| OQU78428 | Sorghum | nucleus | 84.48 | 84.95 |
| GSMUA_Achr4P06050_001 | Banana | cytosol | 72.12 | 73.28 |
| GSMUA_Achr9P22510_001 | Banana | cytosol | 72.03 | 73.04 |
| CDX92473 | Canola | cytosol | 62.27 | 69.36 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 67.75 | 69.3 |
| CDY35815 | Canola | cytosol | 62.17 | 69.25 |
| PGSC0003DMT400071807 | Potato | cytosol | 67.19 | 68.6 |
| Solyc07g007790.2.1 | Tomato | cytosol | 67.01 | 68.41 |
| CDY45096 | Canola | cytosol | 60.97 | 67.49 |
| KRH03629 | Soybean | endoplasmic reticulum | 66.36 | 67.42 |
| Bra002289.1-P | Field mustard | cytosol | 65.24 | 67.37 |
| KRH20178 | Soybean | nucleus | 66.26 | 67.33 |
| VIT_04s0008g05730.t01 | Wine grape | cytosol | 66.17 | 67.3 |
| AT5G20280.1 | Thale cress | cytosol | 65.15 | 67.21 |
| CDX88168 | Canola | nucleus | 59.57 | 66.77 |
| CDX80498 | Canola | cytosol | 59.85 | 66.6 |
| CDX70382 | Canola | cytosol | 59.48 | 66.53 |
| Bra020096.1-P | Field mustard | cytosol | 62.73 | 65.53 |
| Bra009830.1-P | Field mustard | nucleus | 63.1 | 64.85 |
| CDX78411 | Canola | cytosol | 62.55 | 64.77 |
| Bra006090.1-P | Field mustard | cytosol | 62.45 | 64.68 |
| AT5G11110.1 | Thale cress | cytosol | 62.83 | 64.57 |
| Solyc08g042000.2.1 | Tomato | nucleus | 61.9 | 63.73 |
| PGSC0003DMT400076855 | Potato | cytosol, peroxisome, plastid | 25.74 | 53.07 |
| TraesCSU01G082000.1 | Wheat | plastid | 15.06 | 18.66 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.1000 | Gene3D:3.40.50.2000 | Gene3D:3.90.1070.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005985 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016157 | GO:GO:0016740 | GO:GO:0046524 | InterPro:Glyco_trans_1 | InterPro:HAD_sf | InterPro:IPR023214 |
| PFAM:PF00534 | PFAM:PF00862 | PFAM:PF05116 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF334 | InterPro:SPP_N |
| InterPro:SPS_C | SUPFAM:SSF53756 | InterPro:Sucrose_synth | InterPro:SucrsPsyn_pln | TIGRFAMs:TIGR02468 | EnsemblPlantsGene:TraesCSU01G044500 |
| EnsemblPlants:TraesCSU01G044500.2 | TIGR:cd03800 | TIGR:cd16419 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrUn:+:35334954..35342442
Molecular Weight (calculated)
119472.0 Da
IEP (calculated)
6.050
GRAVY (calculated)
-0.451
Length
1076 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVGNDWINSY LEAILDAGGA AGDITAASVA SAAPGGGAGS AAAEKRRDKA SLMLRERGRF NPARYFVEEV ISGFDETDLY KTWVRTSAMR SPQERNTRLE
0101: NMSWRIWNLA RKKKQIEGEE ASRSSKKRLE REKARRDAAA DLSEDLSDGE KGEHINESSI HAESTRGHMP RIGSTDAIDV WANQHKDKKL YIVLISIHGL
0201: IRGENMELGR DSDTGGQVKY VVELARALGE TPGVYRVDLL TRQISAPDVD WSYGEPTEML SPRNSENLGD DMGESSGAYI VRIPFGPREK YIPKEQLWPH
0301: IQEFVDGALV HIMQMSKVLG EQVGNGQPVW PVVIHGHYAD AGDSAALLSG ALNVPMVFTG HSLGRDKLEQ LLKQGRQTRD EIDATYKIMR RIEAEELCLD
0401: ASEIVITSTR QEIDKQWGLY NGFDVIMERK LRARIKRGVS CYGREMPRMI PIPPGMEFSH IVPHDVDLDS EEANEVGSDS PDPPVWADIM RFFSNPRKPM
0501: ILALARPDPK KNITTLVKAF GEHHELRNLA NLTLIMGNRD VIDEMSSTNG AVLTSVLKLI DKYDLYGQVA YPKHHKQSEV PDIYRLAART KGVFINCAYI
0601: EPFGLTLIEA AAYGLPMVAT QNGGPVDIHR VLDNGILVDP HNQNDIAEAL YRLVSDKQLW AKCRQNGLDN IHRFSWPEHC KNYLSRVGTL KSRHPRWQKS
0701: DDATEVSETD SPGDSLRDIH DISLNLKISL DSEKSGNMSK YGRSSTSDRR NLEDAVQKFS EAVSAGTKDE SGEKAEATTG SNKWPSLRRR KHIVVIAVDS
0801: VQDADLVQII KNIFQASNKE KSSGALGFVL STSRAASEIH PLLTSGGIEI TDFDAFICSS GSDLCYPSSN SEDMLSPAEL PFMIDLDYHS QIQYRWGGEG
0901: LRKTLIRWAA EKNSESGQEA VVEDDECSST YCISFKVKNT EAVPPVKDLR KTMRIQALRC HVLYSHDGSK LNFIPVLASR SQALRYLYIR WGVELSNMTV
1001: VVGESGDTDY EGLLGGVQKT IVLKGSFNSA PNQLHAARSY SLEDVVSFDK PGIASVDGYA PDNLKSALQQ FGALEG
0101: NMSWRIWNLA RKKKQIEGEE ASRSSKKRLE REKARRDAAA DLSEDLSDGE KGEHINESSI HAESTRGHMP RIGSTDAIDV WANQHKDKKL YIVLISIHGL
0201: IRGENMELGR DSDTGGQVKY VVELARALGE TPGVYRVDLL TRQISAPDVD WSYGEPTEML SPRNSENLGD DMGESSGAYI VRIPFGPREK YIPKEQLWPH
0301: IQEFVDGALV HIMQMSKVLG EQVGNGQPVW PVVIHGHYAD AGDSAALLSG ALNVPMVFTG HSLGRDKLEQ LLKQGRQTRD EIDATYKIMR RIEAEELCLD
0401: ASEIVITSTR QEIDKQWGLY NGFDVIMERK LRARIKRGVS CYGREMPRMI PIPPGMEFSH IVPHDVDLDS EEANEVGSDS PDPPVWADIM RFFSNPRKPM
0501: ILALARPDPK KNITTLVKAF GEHHELRNLA NLTLIMGNRD VIDEMSSTNG AVLTSVLKLI DKYDLYGQVA YPKHHKQSEV PDIYRLAART KGVFINCAYI
0601: EPFGLTLIEA AAYGLPMVAT QNGGPVDIHR VLDNGILVDP HNQNDIAEAL YRLVSDKQLW AKCRQNGLDN IHRFSWPEHC KNYLSRVGTL KSRHPRWQKS
0701: DDATEVSETD SPGDSLRDIH DISLNLKISL DSEKSGNMSK YGRSSTSDRR NLEDAVQKFS EAVSAGTKDE SGEKAEATTG SNKWPSLRRR KHIVVIAVDS
0801: VQDADLVQII KNIFQASNKE KSSGALGFVL STSRAASEIH PLLTSGGIEI TDFDAFICSS GSDLCYPSSN SEDMLSPAEL PFMIDLDYHS QIQYRWGGEG
0901: LRKTLIRWAA EKNSESGQEA VVEDDECSST YCISFKVKNT EAVPPVKDLR KTMRIQALRC HVLYSHDGSK LNFIPVLASR SQALRYLYIR WGVELSNMTV
1001: VVGESGDTDY EGLLGGVQKT IVLKGSFNSA PNQLHAARSY SLEDVVSFDK PGIASVDGYA PDNLKSALQQ FGALEG
0001: MAGNDWVNSY LEAILDVGQG LDDARSSPSL LLRERGRFTP SRYFVEEVIT GYDETDLHRS WVKAVATRSP QERNTRLENM CWRIWNLARQ KKQHEEKEAQ
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
Arabidopsis Description
SPS1Sucrose-phosphate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94BT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.