Factsheet for PGSC0003DMT400076855

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 4
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g042000.2.1	Tomato	nucleus	96.55	48.23
Os06t0643800-01	Rice	plasma membrane	14.75	41.85
PGSC0003DMT400049047	Potato	golgi, mitochondrion, plastid	43.87	41.11
Zm00001d016399_P002	Maize	extracellular	12.07	40.13
PGSC0003DMT400071807	Potato	cytosol	61.69	30.55
CDX78411	Canola	cytosol	60.54	30.41
Bra006090.1-P	Field mustard	cytosol	60.15	30.22
AT5G11110.1	Thale cress	cytosol	60.34	30.09
VIT_04s0008g05730.t01	Wine grape	cytosol	60.54	29.87
Bra009830.1-P	Field mustard	nucleus	59.0	29.42
GSMUA_Achr4P06050_001	Banana	cytosol	59.39	29.27
GSMUA_Achr9P22510_001	Banana	cytosol	59.0	29.03
CDX80498	Canola	cytosol	53.26	28.75
CDX70382	Canola	cytosol	52.87	28.69
CDX88168	Canola	nucleus	52.11	28.33
Os08t0301500-01	Rice	plasma membrane	54.6	26.74
OQU78428	Sorghum	nucleus	53.83	26.26
Zm00001d050125_P002	Maize	nucleus	52.87	26.06
TraesCSU01G044500.2	Wheat	unclear	53.07	25.74
TraesCS3D01G013000.1	Wheat	nucleus	52.68	25.73
TraesCS3A01G015500.1	Wheat	golgi	52.68	25.68
PGSC0003DMT400079728	Potato	cytosol	8.24	24.43
TraesCS7A01G518200.1	Wheat	cytosol	45.02	24.18
HORVU3Hr1G002280.1	Barley	plastid	52.3	24.16
TraesCS7D01G508100.1	Wheat	cytosol	44.83	24.1
TraesCS7B01G434300.1	Wheat	cytosol	44.83	24.1
Zm00001d015570_P002	Maize	cytosol	43.68	23.65
HORVU7Hr1G115590.10	Barley	nucleus	45.02	23.52
KXG29640	Sorghum	cytosol	43.3	23.44
TraesCS6A01G144800.1	Wheat	cytoskeleton, cytosol, nucleus	42.72	23.13
TraesCS6D01G133800.1	Wheat	cytosol	42.72	23.13
Zm00001d046595_P002	Maize	cytosol	43.1	23.01
KXG20466	Sorghum	cytosol	43.1	22.96
Zm00001d036749_P001	Maize	cytosol	42.72	22.87
PGSC0003DMT400067951	Potato	nucleus	46.17	22.65
Os02t0184400-01	Rice	endoplasmic reticulum, golgi	43.1	22.26
HORVU6Hr1G028330.1	Barley	endoplasmic reticulum, golgi	42.72	21.61
TraesCS6B01G173000.2	Wheat	endoplasmic reticulum, plasma membrane	42.91	21.54
PGSC0003DMT400043117	Potato	cytosol	11.88	7.38
PGSC0003DMT400017087	Potato	cytosol	10.34	6.66
PGSC0003DMT400007505	Potato	cytosol	10.15	6.58
PGSC0003DMT400035264	Potato	cytosol	9.77	6.35
PGSC0003DMT400035262	Potato	cytosol	9.58	6.19
PGSC0003DMT400049042	Potato	cytosol	0.19	0.7

Protein Annotations

KEGG:00500+2.4.1.14	MapMan:3.1.2.7	Gene3D:3.40.50.2000	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009653	GO:GO:0009987	GO:GO:0010208
GO:GO:0016020	GO:GO:0016043	GO:GO:0071836	InterPro:Glyco_trans_1	UniProt:M1CXH8	PFAM:PF00534
PFAM:PF05116	EnsemblPlantsGene:PGSC0003DMG400029892	PGSC:PGSC0003DMG400029892	EnsemblPlants:PGSC0003DMT400076855	PANTHER:PTHR12526	PANTHER:PTHR12526:SF334
InterPro:SPP_N	InterPro:SPS_C	SUPFAM:SSF53756	UniParc:UPI000295E818	SEG:seg	:

Description

Sucrose phosphate synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400029892]

Coordinates

chr8:+:20206591..20210223

Molecular Weight (calculated)

57986.2 Da

IEP (calculated)

7.481

GRAVY (calculated)

-0.273

Length

522 amino acids

Sequence
(BLAST)

001: MSSTNSSVLV SIIKLIDKYD LYGQVAYPKH HKQSDVPEIY RLAAKSKGVF INPAFIEPFG LTLIEAAAHA LPMVATKNGG PVDINRVLDN GLLVDPHDQH
101: SVADALLKLV ADKQLWARCR DSGLRNIHLF SWPEHCKTYL SRVMSCKQRQ PKWKRNEDEC SDSEPDSPED SLRDIKDLSL SLKLSLDGDK NEKSGTSVTA
201: LDFVENATKK KSQLDNMVST LPVSKSMEKA EQSKFQLSRR RKLIVIAADC DTPAGLADVT KTIIETVKKA SSIGFILSTA LTISEVQSFL ELSKLKPHDF
301: DAYICNSGGE VYYPCLNSEE KCSGPSFTVD SDYQTHIDYR WGGEDLRKTI IRWADSLNDK VKNKAEIAIK EIDSASAHCF SFRINDQSLV PPVKEVRRLL
401: RIQALRCHAI YCQSGSRLNV IPVLASRSQA LRYMFIRWGI NLSNLVVFAG ESGDTDYELL VGGVHKTVVL NGVCSDASKV HSNRNYPLEH VLPAMNSNIV
501: ECGSCSKEDI SVALNNLGFS KE

Best Arabidopsis Sequence Match ( AT5G11110.1 )
(BLAST)

0001: MVGNDWVNSY LEAILAAEPG IANSKPPGTG DSKSSLLLRE RGHFSPTRYF VEEVITGFDE TDLHRSWVQA AATRSPQERN TRLENLCWRI WNLARQKKQV
0101: EGKNAKREAK REREREKARR EVTAEMSEDF SEGEKADLPG EIPTPSDNNT KGRMSRISSV DVFENWFAQH KEKKLYIVLI SLHGLIRGEN MELGRDSDTG
0201: GQVKYVVELA RALGSMPGVY RVDLLTRQVT APDVDSSYSE PSEMLNPIDT DIEQENGESS GAYIIRIPFG PKDKYVPKEL LWPHIPEFVD RALSHIMQIS
0301: KVLGEQIGGG QQVWPVSIHG HYADAGDSTA LLSGALNVPM VFTGHSLGRD KLEQLLKQGR PKEEINSNYK IWRRIEAEEL CLDASEIVIT STRQEVDEQW
0401: RLYDGFDPVL ERKLRARMKR GVSCLGRFMP RMVVIPPGME FHHIVPHDVD ADGDDENPQT ADPPIWSEIM RFFSNPRKPM ILALARPDPK KNLVTLVKAF
0501: GECRPLRELA NLTLIMGNRN DIDELSSTNS SVLLSILKLI DKYDLYGQVA MPKHHQQSDV PEIYRLAAKT KGVFINPAFI EPFGLTLIEA GAHGLPTVAT
0601: INGGPVDIHR VLDNGLLVDP HDQQAIADAL LKLVSDRQLW GRCRQNGLNN IHLFSWPEHC KTYLARIASC KQRHPKWQRV EFENSDSDSP SDSLRDINDI
0701: SLNLKLSLDG EKSGSNNGVD TNLDAEDRAA ERKAEVEKAV STLAQKSKPT EKFDSKMPTL KRRKNIFVIS VDCSATSDLL AVVKTVIDAA GRGSSTGFIL
0801: STSMTISETH TALLSGGLKP QDFDAVICSS GSELYFTSSG SEDKTALPYT LDADYHSHIE FRWGGESLRK TLIRWISSVE EKKKTKKGEI LVEDESSSTN
0901: YCLSFKVKDP ALMPPMKELR KLMRNQALRC NAVYCQNGAR LNVIPVLASR SQALRYLLVR WGIDLSNMVV FVGDSGDTDY EGLLGGIHKT VILKGLASDL
1001: REQPGNRSYP MEDVTPLNSP NITEAKECGR DAIKVALEKL GISLLKP

Arabidopsis Description

SPS2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8QNB0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.