Subcellular Localization
min:
: max
Winner_takes_all: golgi, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 6
- plasma membrane 5
- endoplasmic reticulum 6
- vacuole 5
- plastid 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0338100-00 | |
| Os01t0793200-01 | |
| Os03t0262900-02 | |
| Os07t0598500-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G20280.1 | Os01t0338100-00 | AT1G02680.1 | 21798944 |
| AT5G20280.1 | Os01t0793200-01 | AT1G61870.1 | 21798944 |
| AT5G20280.1 | Os07t0598500-01 | AT4G21705.1 | 21798944 |
| AT5G20280.1 | Os03t0262900-02 | AT5G09320.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG29640 | Sorghum | cytosol | 89.12 | 93.46 |
| Zm00001d015570_P002 | Maize | cytosol | 88.53 | 92.84 |
| TraesCS6A01G144800.1 | Wheat | cytoskeleton, cytosol, nucleus | 86.15 | 90.35 |
| TraesCS6D01G133800.1 | Wheat | cytosol | 85.46 | 89.63 |
| HORVU6Hr1G028330.1 | Barley | endoplasmic reticulum, golgi | 88.33 | 86.53 |
| TraesCS6B01G173000.2 | Wheat | endoplasmic reticulum, plasma membrane | 88.13 | 85.67 |
| Os06t0643800-01 | Rice | plasma membrane | 15.33 | 84.24 |
| GSMUA_Achr4P06050_001 | Banana | cytosol | 64.79 | 61.85 |
| GSMUA_Achr9P22510_001 | Banana | cytosol | 64.79 | 61.73 |
| CDX88168 | Canola | nucleus | 58.36 | 61.46 |
| CDX70382 | Canola | cytosol | 58.46 | 61.43 |
| CDX80498 | Canola | cytosol | 58.56 | 61.22 |
| CDX92473 | Canola | cytosol | 58.06 | 60.77 |
| CDY35815 | Canola | cytosol | 57.96 | 60.66 |
| CDY45096 | Canola | cytosol | 57.57 | 59.88 |
| Os08t0301500-01 | Rice | plasma membrane | 63.11 | 59.85 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 61.23 | 58.84 |
| KRH20178 | Soybean | nucleus | 60.24 | 57.51 |
| KRH03629 | Soybean | endoplasmic reticulum | 60.24 | 57.51 |
| VIT_04s0008g05730.t01 | Wine grape | cytosol | 60.04 | 57.37 |
| PGSC0003DMT400071807 | Potato | cytosol | 59.64 | 57.21 |
| Solyc07g007790.2.1 | Tomato | cytosol | 59.45 | 57.02 |
| CDX78411 | Canola | cytosol | 58.26 | 56.69 |
| Bra009830.1-P | Field mustard | nucleus | 58.65 | 56.64 |
| Bra006090.1-P | Field mustard | cytosol | 58.16 | 56.59 |
| Bra002289.1-P | Field mustard | cytosol | 58.26 | 56.53 |
| AT5G20280.1 | Thale cress | cytosol | 58.06 | 56.28 |
| Bra020096.1-P | Field mustard | cytosol | 57.07 | 56.02 |
| AT5G11110.1 | Thale cress | cytosol | 57.67 | 55.68 |
| Solyc08g042000.2.1 | Tomato | nucleus | 56.78 | 54.93 |
| Os01t0919400-01 | Rice | plasma membrane | 49.36 | 46.03 |
| PGSC0003DMT400076855 | Potato | cytosol, peroxisome, plastid | 22.26 | 43.1 |
| Os11t0236100-01 | Rice | cytosol, plasma membrane | 18.69 | 37.13 |
| Os03t0340500-01 | Rice | cytosol, plasma membrane, plastid | 16.12 | 20.15 |
| Os06t0194900-03 | Rice | extracellular | 15.83 | 19.8 |
| Os07t0616800-01 | Rice | cytosol | 15.23 | 18.87 |
| Os03t0401300-01 | Rice | extracellular | 14.94 | 18.5 |
| Os02t0831500-01 | Rice | plastid | 15.33 | 18.32 |
| Os04t0249500-00 | Rice | cytosol | 14.84 | 17.77 |
| Os04t0309600-01 | Rice | cytosol, plasma membrane | 14.74 | 17.65 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.2000 | EntrezGene:4328527 | UniProt:A0A0P0VFT3 | ProteinID:BAS77333.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005985 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016157 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0046524 | InterPro:Glyco_trans_1 |
| EnsemblPlantsGene:Os02g0184400 | EnsemblPlants:Os02t0184400-01 | PFAM:PF00534 | PFAM:PF00862 | PFAM:PF05116 | PANTHER:PTHR12526 |
| PANTHER:PTHR12526:SF347 | InterPro:SPP_N | InterPro:SPS_C | SUPFAM:SSF53756 | SignalP:SignalP-noTM | InterPro:Sucrose_synth |
| InterPro:SucrsPsyn_pln | TIGRFAMs:TIGR02468 | UniParc:UPI000043DF19 | RefSeq:XP_015626343.1 | SEG:seg | : |
Description
SUCROSE PHOSPHATE SYNTHASE 2Similar to Sucrose-phosphate synthase 9 (EC 2.4.1.14). (Os02t0184400-01);Sucrose-phosphate synthase 9 (EC 2.4.1.14). (Os02t0184400-02);Sucrose-phosphate synthase 9 (EC 2.4.1.14). (Os02t0184400-03);Similar to cDNA clone:J023150H16, full insert sequence. (Os02t0184400-04)
Coordinates
chr2:+:4708493..4716280
Molecular Weight (calculated)
113263.0 Da
IEP (calculated)
7.938
GRAVY (calculated)
-0.296
Length
1011 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLRHFSALAP SPLLFLLFLP FPWLRLHSSA HSSPPPRSRR DLHGGGGGMA GNDNWINSYL DAILDAGKAA IGGDRPSLLL RERGHFSPAR YFVEEVITGY
0101: DETDLYKTWL RANAMRSPQE RNTRLENMTW RIWNLARKKK EFEKEEACRL LKRQPEAEKL RTDTNADMSE DLFEGEKGED AGDPSVAYGD STTGSSPKTS
0201: SIDKLYIVLI SLHGLVRGEN MELGRDSDTG GQVKYVVELA KALSSSPGVY RVDLLTRQIL APNFDRSYGE PTEMLVSTSF KNSKQEKGEN SGAYIIRIPF
0301: GPKDKYLAKE HLWPFIQEFV DGALGHIVRM SKTIGEEIGC GHPVWPAVIH GHYASAGIAA ALLSGSLNIP MAFTGHFLGK DKLEGLLKQG RHSREQINMT
0401: YKIMCRIEAE ELSLDASEIV IASTRQEIEE QWNLYDGFEV ILARKLRARV KRGANCYGRY MPRMVIIPPG VEFGHIIHDF EMDGEEENPC PASEDPPIWS
0501: QIMRFFTNPR KPMILAVARP YPEKNITSLV KAFGECRPLR ELANLTLIMG NREAISKMNN MSAAVLTSVL TLIDEYDLYG QVAYPKHHKH SEVPDIYRLA
0601: ARTKGAFVNV AYFEQFGVTL IEAAMNGLPI IATKNGAPVE INQVLNNGLL VDPHDQNAIA DALYKLLSDK QLWSRCRENG LKNIHQFSWP EHCKNYLSRI
0701: LTLGPRSPAI GGKQEQKAPI SGRKHIIVIS VDSVNKEDLV RIIRNTIEVT RTEKMSGSTG FVLSTSLTIS EIRSLLVSAG MLPTVFDAFI CNSGSNIYYP
0801: LYSGDTPSSS QVTPAIDQNH QAHIEYRWGG EGLRKYLVKW ATSVVERKGR IERQIIFEDP EHSSTYCLAF RVVNPNHLPP LKELRKLMRI QSLRCNALYN
0901: HSATRLSVVP IHASRSQALR YLCIRWGIEL PNVAVLVGES GDSDYEELLG GLHRTVILKG EFNIPANRIH TVRRYPLQDV VALDSSNIIG IEGYSTDDMK
1001: SALQQIGVLT Q
0101: DETDLYKTWL RANAMRSPQE RNTRLENMTW RIWNLARKKK EFEKEEACRL LKRQPEAEKL RTDTNADMSE DLFEGEKGED AGDPSVAYGD STTGSSPKTS
0201: SIDKLYIVLI SLHGLVRGEN MELGRDSDTG GQVKYVVELA KALSSSPGVY RVDLLTRQIL APNFDRSYGE PTEMLVSTSF KNSKQEKGEN SGAYIIRIPF
0301: GPKDKYLAKE HLWPFIQEFV DGALGHIVRM SKTIGEEIGC GHPVWPAVIH GHYASAGIAA ALLSGSLNIP MAFTGHFLGK DKLEGLLKQG RHSREQINMT
0401: YKIMCRIEAE ELSLDASEIV IASTRQEIEE QWNLYDGFEV ILARKLRARV KRGANCYGRY MPRMVIIPPG VEFGHIIHDF EMDGEEENPC PASEDPPIWS
0501: QIMRFFTNPR KPMILAVARP YPEKNITSLV KAFGECRPLR ELANLTLIMG NREAISKMNN MSAAVLTSVL TLIDEYDLYG QVAYPKHHKH SEVPDIYRLA
0601: ARTKGAFVNV AYFEQFGVTL IEAAMNGLPI IATKNGAPVE INQVLNNGLL VDPHDQNAIA DALYKLLSDK QLWSRCRENG LKNIHQFSWP EHCKNYLSRI
0701: LTLGPRSPAI GGKQEQKAPI SGRKHIIVIS VDSVNKEDLV RIIRNTIEVT RTEKMSGSTG FVLSTSLTIS EIRSLLVSAG MLPTVFDAFI CNSGSNIYYP
0801: LYSGDTPSSS QVTPAIDQNH QAHIEYRWGG EGLRKYLVKW ATSVVERKGR IERQIIFEDP EHSSTYCLAF RVVNPNHLPP LKELRKLMRI QSLRCNALYN
0901: HSATRLSVVP IHASRSQALR YLCIRWGIEL PNVAVLVGES GDSDYEELLG GLHRTVILKG EFNIPANRIH TVRRYPLQDV VALDSSNIIG IEGYSTDDMK
1001: SALQQIGVLT Q
0001: MAGNDWVNSY LEAILDVGQG LDDARSSPSL LLRERGRFTP SRYFVEEVIT GYDETDLHRS WVKAVATRSP QERNTRLENM CWRIWNLARQ KKQHEEKEAQ
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
Arabidopsis Description
SPS1Sucrose-phosphate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94BT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.