Factsheet for Os06t0643800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0338100-00
Os01t0793200-01
Os03t0262900-02
Os07t0598500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G20280.1	Os01t0338100-00	AT1G02680.1	21798944
AT5G20280.1	Os01t0793200-01	AT1G61870.1	21798944
AT5G20280.1	Os07t0598500-01	AT4G21705.1	21798944
AT5G20280.1	Os03t0262900-02	AT5G09320.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046595_P002	Maize	cytosol	88.04	16.56
KXG20466	Sorghum	cytosol	87.5	16.43
Zm00001d036749_P001	Maize	cytosol	85.87	16.21
TraesCS7B01G434300.1	Wheat	cytosol	83.15	15.76
TraesCS7D01G508100.1	Wheat	cytosol	82.61	15.65
TraesCS7A01G518200.1	Wheat	cytosol	82.61	15.64
HORVU7Hr1G115590.10	Barley	nucleus	83.7	15.42
Os02t0184400-01	Rice	endoplasmic reticulum, golgi	84.24	15.33
PGSC0003DMT400076855	Potato	cytosol, peroxisome, plastid	41.85	14.75
Os11t0236100-01	Rice	cytosol, plasma membrane	34.24	12.38
GSMUA_Achr4P06050_001	Banana	cytosol	61.96	10.76
GSMUA_Achr9P22510_001	Banana	cytosol	61.41	10.65
CDX70382	Canola	cytosol	52.72	10.08
CDX88168	Canola	nucleus	52.17	10.0
CDX80498	Canola	cytosol	52.17	9.93
CDY45096	Canola	cytosol	50.54	9.57
Os08t0301500-01	Rice	plasma membrane	54.89	9.47
CDX78411	Canola	cytosol	52.72	9.34
Bra006090.1-P	Field mustard	cytosol	52.72	9.34
CDX92473	Canola	cytosol	48.91	9.32
CDY35815	Canola	cytosol	48.91	9.32
Bra009830.1-P	Field mustard	nucleus	52.17	9.17
VIT_11s0118g00200.t01	Wine grape	cytosol	52.17	9.13
AT5G11110.1	Thale cress	cytosol	51.63	9.07
KRH20178	Soybean	nucleus	52.17	9.07
KRH03629	Soybean	endoplasmic reticulum	52.17	9.07
VIT_04s0008g05730.t01	Wine grape	cytosol	51.63	8.98
Bra020096.1-P	Field mustard	cytosol	49.46	8.83
PGSC0003DMT400071807	Potato	cytosol	50.54	8.82
Solyc07g007790.2.1	Tomato	cytosol	50.0	8.73
Bra002289.1-P	Field mustard	cytosol	48.91	8.64
AT5G20280.1	Thale cress	cytosol	47.28	8.34
Solyc08g042000.2.1	Tomato	nucleus	42.39	7.46
Os01t0919400-01	Rice	plasma membrane	35.87	6.09
Zm00001d016399_P002	Maize	extracellular	3.8	4.46
Os07t0616800-01	Rice	cytosol	3.8	0.86
Os03t0401300-01	Rice	extracellular	3.26	0.74
Os03t0340500-01	Rice	cytosol, plasma membrane, plastid	2.72	0.62
Os06t0194900-03	Rice	extracellular	2.17	0.5
Os04t0249500-00	Rice	cytosol	2.17	0.47
Os02t0831500-01	Rice	plastid	2.17	0.47
Os04t0309600-01	Rice	cytosol, plasma membrane	1.63	0.36

Protein Annotations

EnsemblPlants:Os06t0643800-01	EnsemblPlantsGene:Os06g0643800	InterPro:SPP_N	PFAM:PF05116	ProteinID:BAS98835.1	UniParc:UPI0000E128D1
UniProt:A0A0P0WZF8	MapMan:35.1	:	:	:	:

Description

SUCROSE PHOSPHATE SYNTHASE 6Similar to Sucrose-phosphate synthase 7 (EC 2.4.1.14) (Fragment). (Os06t0643800-01)

Coordinates

chr6:-:26242050..26243863

Molecular Weight (calculated)

20863.2 Da

IEP (calculated)

9.589

GRAVY (calculated)

-0.287

Length

184 amino acids

Sequence
(BLAST)

001: WGGEGLRKYL VKWASSVVER RGRIEKQVIF EDPEHSSTYC LAFKVVNPNH LPPLKELQKL MRIQSLRCHA LYNHGATRLS VIPIHASRSK ALRYLSVRWG
101: IELQNVVVLV GETGDSDYEE LFGGLHKTVI LKGEFNTSAN RIHSVRRYPL QDVVALDSPN IIGIEGYGTD DMRSALKQLD IRAQ

Best Arabidopsis Sequence Match ( AT5G11110.1 )
(BLAST)

0001: MVGNDWVNSY LEAILAAEPG IANSKPPGTG DSKSSLLLRE RGHFSPTRYF VEEVITGFDE TDLHRSWVQA AATRSPQERN TRLENLCWRI WNLARQKKQV
0101: EGKNAKREAK REREREKARR EVTAEMSEDF SEGEKADLPG EIPTPSDNNT KGRMSRISSV DVFENWFAQH KEKKLYIVLI SLHGLIRGEN MELGRDSDTG
0201: GQVKYVVELA RALGSMPGVY RVDLLTRQVT APDVDSSYSE PSEMLNPIDT DIEQENGESS GAYIIRIPFG PKDKYVPKEL LWPHIPEFVD RALSHIMQIS
0301: KVLGEQIGGG QQVWPVSIHG HYADAGDSTA LLSGALNVPM VFTGHSLGRD KLEQLLKQGR PKEEINSNYK IWRRIEAEEL CLDASEIVIT STRQEVDEQW
0401: RLYDGFDPVL ERKLRARMKR GVSCLGRFMP RMVVIPPGME FHHIVPHDVD ADGDDENPQT ADPPIWSEIM RFFSNPRKPM ILALARPDPK KNLVTLVKAF
0501: GECRPLRELA NLTLIMGNRN DIDELSSTNS SVLLSILKLI DKYDLYGQVA MPKHHQQSDV PEIYRLAAKT KGVFINPAFI EPFGLTLIEA GAHGLPTVAT
0601: INGGPVDIHR VLDNGLLVDP HDQQAIADAL LKLVSDRQLW GRCRQNGLNN IHLFSWPEHC KTYLARIASC KQRHPKWQRV EFENSDSDSP SDSLRDINDI
0701: SLNLKLSLDG EKSGSNNGVD TNLDAEDRAA ERKAEVEKAV STLAQKSKPT EKFDSKMPTL KRRKNIFVIS VDCSATSDLL AVVKTVIDAA GRGSSTGFIL
0801: STSMTISETH TALLSGGLKP QDFDAVICSS GSELYFTSSG SEDKTALPYT LDADYHSHIE FRWGGESLRK TLIRWISSVE EKKKTKKGEI LVEDESSSTN
0901: YCLSFKVKDP ALMPPMKELR KLMRNQALRC NAVYCQNGAR LNVIPVLASR SQALRYLLVR WGIDLSNMVV FVGDSGDTDY EGLLGGIHKT VILKGLASDL
1001: REQPGNRSYP MEDVTPLNSP NITEAKECGR DAIKVALEKL GISLLKP

Arabidopsis Description

SPS2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8QNB0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.