Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G508100.1 | Wheat | cytosol | 99.49 | 99.59 |
| TraesCS7B01G434300.1 | Wheat | cytosol | 98.87 | 98.97 |
| HORVU7Hr1G115590.10 | Barley | nucleus | 90.53 | 88.09 |
| KXG20466 | Sorghum | cytosol | 84.36 | 83.67 |
| Zm00001d036749_P001 | Maize | cytosol | 83.33 | 83.08 |
| TraesCS6A01G144800.1 | Wheat | cytoskeleton, cytosol, nucleus | 82.1 | 82.78 |
| Os06t0643800-01 | Rice | plasma membrane | 15.64 | 82.61 |
| Zm00001d046595_P002 | Maize | cytosol | 75.41 | 74.95 |
| Zm00001d016399_P002 | Maize | extracellular | 10.7 | 66.24 |
| GSMUA_Achr4P06050_001 | Banana | cytosol | 67.39 | 61.85 |
| CDX88168 | Canola | nucleus | 61.01 | 61.77 |
| GSMUA_Achr9P22510_001 | Banana | cytosol | 67.18 | 61.55 |
| CDX80498 | Canola | cytosol | 61.21 | 61.53 |
| CDX70382 | Canola | cytosol | 60.8 | 61.43 |
| CDX92473 | Canola | cytosol | 60.6 | 60.97 |
| CDY35815 | Canola | cytosol | 60.49 | 60.87 |
| CDY45096 | Canola | cytosol | 60.49 | 60.49 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 63.48 | 58.65 |
| KRH20178 | Soybean | nucleus | 63.27 | 58.07 |
| TraesCS3A01G015500.1 | Wheat | golgi | 63.68 | 57.8 |
| KRH03629 | Soybean | endoplasmic reticulum | 62.86 | 57.7 |
| PGSC0003DMT400071807 | Potato | cytosol | 62.55 | 57.69 |
| Solyc07g007790.2.1 | Tomato | cytosol | 62.14 | 57.31 |
| VIT_04s0008g05730.t01 | Wine grape | cytosol | 62.35 | 57.28 |
| AT5G20280.1 | Thale cress | cytosol | 61.21 | 57.05 |
| Bra009830.1-P | Field mustard | nucleus | 61.32 | 56.92 |
| Bra002289.1-P | Field mustard | cytosol | 60.91 | 56.81 |
| Bra020096.1-P | Field mustard | cytosol | 60.08 | 56.7 |
| CDX78411 | Canola | cytosol | 60.39 | 56.5 |
| Bra006090.1-P | Field mustard | cytosol | 60.29 | 56.4 |
| AT5G11110.1 | Thale cress | cytosol | 60.6 | 56.26 |
| Solyc08g042000.2.1 | Tomato | nucleus | 60.08 | 55.89 |
| TraesCS3A01G425500.1 | Wheat | nucleus | 50.21 | 45.44 |
| PGSC0003DMT400076855 | Potato | cytosol, peroxisome, plastid | 24.18 | 45.02 |
| TraesCS4A01G225100.1 | Wheat | cytosol | 46.91 | 43.1 |
| TraesCS4A01G492600.1 | Wheat | cytosol | 13.27 | 23.04 |
| TraesCS7A01G158900.1 | Wheat | golgi, nucleus | 16.26 | 19.55 |
| TraesCS2A01G168200.1 | Wheat | golgi, unclear | 16.56 | 19.37 |
| TraesCS4A01G140000.1 | Wheat | cytosol, golgi, unclear | 16.05 | 19.28 |
| TraesCS7A01G040900.2 | Wheat | cytosol | 15.84 | 18.9 |
| TraesCS4A01G446700.1 | Wheat | cytosol | 15.84 | 18.9 |
| TraesCS7A01G557600.1 | Wheat | cytosol | 15.74 | 17.77 |
| TraesCS2A01G406700.1 | Wheat | cytosol | 15.43 | 17.36 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.2000 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005975 | GO:GO:0005985 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016157 |
| GO:GO:0016740 | GO:GO:0046524 | InterPro:Glyco_trans_1 | PFAM:PF00534 | PFAM:PF00862 | PFAM:PF05116 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF406 | InterPro:SPP_N | InterPro:SPS_C | SUPFAM:SSF53756 | InterPro:Sucrose_synth |
| InterPro:SucrsPsyn_pln | TIGRFAMs:TIGR02468 | EnsemblPlantsGene:TraesCS7A01G518200 | EnsemblPlants:TraesCS7A01G518200.1 | TIGR:cd03800 | TIGR:cd16419 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:701764039..701771710
Molecular Weight (calculated)
108662.0 Da
IEP (calculated)
7.424
GRAVY (calculated)
-0.315
Length
972 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGNDNWINS YLDAILDAGK GAGSGSGGGG GGGAGGDRPS LLLRERGHFS PARYFVEEVI TGYDETDLYK TWSRANAMRS PQERNTRLEN MTWRIWNLAR
101: KKKEVEDAKR LKRRLETEKP RTDATAEMSE DLFEGEKGED AGDASVAYGD SSAGNTPRIS AVDKLYIVLI SLHGLVRGEN LELGRDSDTS GQVKYVVELA
201: KALSSCPGVY RVDLLTRQIL APNYDRGYGE PSETLVPTSF KNLKQERGEN SGAYITRIPF GPKDKYLAKE HLWPYVQEFV DGALSHIVHM SKIIGEEIGC
301: GHPMWPAVIH GHYASAGVAA ALISGALNVH MVFTGHFLGK DKLEGLLKQG RQTREEINMT YKIMRRIEAE ELSLDASEIV IASTRQEIEE QWNLYDGFEV
401: MLARKLRARV KRGANCYGRY MPRMVIIPPG VEFGHMIHEF DMEGEEDSHS PASEDPPIWS EIMRFFTNPR KPLILAVARP YPEKNITTLV KAFGECRPLR
501: ELANLTLIMG NREAISKMSN MSAAVLTSVL TLIDEYDLYG QVAYPKHHKH SEVLDIYRLA ARTKGAFVNV AYFEQFGVTL IEAAMHGLPV IATKNGAPVE
601: IHQVLDNGLL VDPHDQHAIA DALYKLLSDK QLWSRCRENG LKNIHRFSWP EHCKNYLSRI LTLSPRYPAF PGNEDQIKAP IKERKCIIVI AVDSASKKDL
701: VCIIKNSIEA TRKETLSGST GFVLSTSLTM SEIHSLLISA GMAPTDFDAF ICNSGSDLFY PSRAGDSPST SRVTFALDRT YQSHIEYRWG GEGLRKYLVK
801: WASSIVERRG RTEKQVIFED AEHSSTCCFA FRVVNPNYLP PLKELQKLMR IQSLRCHALY NHSATRLSVI PIHASRSQAL RYLSVRWGIE LRNVVILVGE
901: SGDSDYEELF GGLHKTIVLK GEFNTPANRI HTVRRYPLQD VIALDCSNII GVEGCSADDL TPTLKTLGIP TK
101: KKKEVEDAKR LKRRLETEKP RTDATAEMSE DLFEGEKGED AGDASVAYGD SSAGNTPRIS AVDKLYIVLI SLHGLVRGEN LELGRDSDTS GQVKYVVELA
201: KALSSCPGVY RVDLLTRQIL APNYDRGYGE PSETLVPTSF KNLKQERGEN SGAYITRIPF GPKDKYLAKE HLWPYVQEFV DGALSHIVHM SKIIGEEIGC
301: GHPMWPAVIH GHYASAGVAA ALISGALNVH MVFTGHFLGK DKLEGLLKQG RQTREEINMT YKIMRRIEAE ELSLDASEIV IASTRQEIEE QWNLYDGFEV
401: MLARKLRARV KRGANCYGRY MPRMVIIPPG VEFGHMIHEF DMEGEEDSHS PASEDPPIWS EIMRFFTNPR KPLILAVARP YPEKNITTLV KAFGECRPLR
501: ELANLTLIMG NREAISKMSN MSAAVLTSVL TLIDEYDLYG QVAYPKHHKH SEVLDIYRLA ARTKGAFVNV AYFEQFGVTL IEAAMHGLPV IATKNGAPVE
601: IHQVLDNGLL VDPHDQHAIA DALYKLLSDK QLWSRCRENG LKNIHRFSWP EHCKNYLSRI LTLSPRYPAF PGNEDQIKAP IKERKCIIVI AVDSASKKDL
701: VCIIKNSIEA TRKETLSGST GFVLSTSLTM SEIHSLLISA GMAPTDFDAF ICNSGSDLFY PSRAGDSPST SRVTFALDRT YQSHIEYRWG GEGLRKYLVK
801: WASSIVERRG RTEKQVIFED AEHSSTCCFA FRVVNPNYLP PLKELQKLMR IQSLRCHALY NHSATRLSVI PIHASRSQAL RYLSVRWGIE LRNVVILVGE
901: SGDSDYEELF GGLHKTIVLK GEFNTPANRI HTVRRYPLQD VIALDCSNII GVEGCSADDL TPTLKTLGIP TK
0001: MARNDWINSY LEAILDVGTS KKKRFESNSK IVQKLGDINS KDHQEKVFGD MNGKDHQEKV FSPIKYFVEE VVNSFDESDL YKTWIKVIAT RNTRERSNRL
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
Arabidopsis Description
SPS4Probable sucrose-phosphate synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:F4JLK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.