Factsheet for TraesCS2A01G406700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G403600.1	Wheat	cytosol	99.42	99.19
TraesCS2B01G424300.1	Wheat	cytosol	98.96	98.96
TraesCS7A01G557600.1	Wheat	cytosol	93.4	93.73
Os04t0249500-00	Rice	cytosol	87.85	89.93
Os04t0309600-01	Rice	cytosol, plasma membrane	87.62	89.69
Zm00001d050151_P001	Maize	cytosol	13.77	86.86
OQU77175	Sorghum	plastid	88.89	85.62
TraesCS4A01G492600.1	Wheat	cytosol	55.44	85.54
Zm00001d014119_P001	Maize	cytosol	14.7	83.01
GSMUA_Achr3P13980_001	Banana	cytosol	74.65	76.42
GSMUA_Achr9P21240_001	Banana	cytosol	74.19	75.95
PGSC0003DMT400079728	Potato	cytosol	15.16	74.43
VIT_04s0079g00230.t01	Wine grape	cytosol	68.17	69.54
PGSC0003DMT400043117	Potato	cytosol	67.25	69.17
KRH72916	Soybean	cytosol	67.25	69.17
KRH17270	Soybean	cytosol	67.25	69.17
VIT_17s0053g00700.t01	Wine grape	cytosol	71.41	68.1
Solyc02g081300.2.1	Tomato	cytosol, nucleus	67.94	66.4
CDY71780	Canola	cytosol, extracellular	27.31	66.29
KRH30890	Soybean	cytosol	64.12	65.56
Bra039502.1-P	Field mustard	cytosol	62.96	64.99
AT5G37180.1	Thale cress	cytosol	62.73	64.76
CDY38565	Canola	cytosol	62.96	64.3
CDY26996	Canola	cytosol	62.85	64.18
Solyc03g098290.2.1	Tomato	cytosol, nucleus	65.86	63.86
KRH09470	Soybean	cytosol, plastid	66.55	62.5
KRH38924	Soybean	plastid	66.44	62.32
CDX72985	Canola	cytosol	64.7	59.85
CDX96472	Canola	cytosol	64.47	59.57
Bra015995.1-P	Field mustard	cytosol	64.93	59.49
Bra003845.1-P	Field mustard	cytosol	64.58	59.36
CDX68228	Canola	cytosol	64.24	59.04
CDY11107	Canola	cytosol	64.12	58.94
AT1G73370.1	Thale cress	cytosol	63.89	58.6
TraesCS4A01G140000.1	Wheat	cytosol, golgi, unclear	54.05	57.73
TraesCS7A01G158900.1	Wheat	golgi, nucleus	51.74	55.32
TraesCS4A01G446700.1	Wheat	cytosol	51.27	54.36
TraesCS7A01G040900.2	Wheat	cytosol	51.27	54.36
TraesCS2A01G168200.1	Wheat	golgi, unclear	52.08	54.15
TraesCS3A01G425500.1	Wheat	nucleus	19.79	15.92
TraesCS7A01G518200.1	Wheat	cytosol	17.36	15.43
TraesCS4A01G225100.1	Wheat	cytosol	18.63	15.22
TraesCS3A01G015500.1	Wheat	golgi	18.75	15.13
TraesCS6A01G144800.1	Wheat	cytoskeleton, cytosol, nucleus	16.78	15.04

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016157	GO:GO:0016740	InterPro:Glyco_trans_1	PFAM:PF00534	PFAM:PF00862
PANTHER:PTHR12526	PANTHER:PTHR12526:SF296	SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470
EnsemblPlantsGene:TraesCS2A01G406700	EnsemblPlants:TraesCS2A01G406700.1	TIGR:cd03800	SEG:seg	:	:

Description

No Description!

Coordinates

chr2A:+:662338619..662342673

Molecular Weight (calculated)

98828.0 Da

IEP (calculated)

8.487

GRAVY (calculated)

-0.420

Length

864 amino acids

Sequence
(BLAST)

001: MASTKLSFKR MDSVAETMPD ALRQSRYQMK RCFQRYVSKG RRLLKNQQLM EELERSLDDK VEKEKLVEGF LGYIICSTQE AVVLPPFVAF AVRMNPGIWE
101: YVKVHADDLS VEGITPSEYL KFKETLYDEK WAKDDNSLEV DFGALDLSTP RLTLPSSIGN GMQFVSKFMS SKLNGKPESM KPLLDYLLTL NYRGEKLMVN
201: DTIDTVNKLQ TALLLAEVFV SGLPKFTPYL KFEQRFQEWG LEKGWGENAE TCKETLNFLS EVLQAPDPIN MEKFFSRVPT IFNIVVFSIH GYFGQEKVLG
301: LPDTGGQVVY ILDQVRSMEE ELLQRIKLQG LHITPKILVL TRLIPDSKGT KCNVELEPVE NTKYSHILRV PFKTEDGKDL RQWVSRFDIY PYLERYAQDA
401: SAKILDILEG KPDLIIGNYT DGNLVASLMS SKLGVTQGTI AHALEKTKYE DSDSKWRELD QKYHFSCQFT ADMIAMNTTD FIITSTYQEI AGSKEKPGQY
501: EHHYAFTMPG LCRYATGINV FDPKFNIAAP GADQSVYFPF TQKQKRLTAL HPQIEELLYS KEDTDEHIGY LADRSKPIIF SMARLDKVKN ITGLVEWYGQ
601: NKKVRDLVNL VVVAGLLNAA QSKDREEIDE INKMHNLIDK YQLKGQIRWI KAQTDRVRNG ELYRYIADTK GAFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHINPM NGREAGTKIA DFFQKCKEDP GYWNKVSTAG LQRIYECYTW KIYATKVLNM GSMYGFWRTL NKEERVAKQR YMQMFYNLQF
801: RNLVKTVPRV GEQPPRPATT TGAAAERNQI VARPRERKPQ GRVQRMMTSL LGPKPPTYEQ NGYR

Best Arabidopsis Sequence Match ( AT1G73370.1 )
(BLAST)

001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY

Arabidopsis Description

SUS6Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.