CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, extracellular
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26996	Canola	cytosol	99.44	41.84
Bra039502.1-P	Field mustard	cytosol	98.31	41.82
CDY38565	Canola	cytosol	98.31	41.37
AT5G37180.1	Thale cress	cytosol	92.7	39.43
VIT_04s0079g00230.t01	Wine grape	cytosol	71.91	30.22
KRH17270	Soybean	cytosol	69.94	29.64
KRH72916	Soybean	cytosol	69.66	29.52
KRH30890	Soybean	cytosol	69.38	29.23
PGSC0003DMT400043117	Potato	cytosol	67.42	28.57
Os04t0249500-00	Rice	cytosol	65.73	27.73
Os04t0309600-01	Rice	cytosol, plasma membrane	65.73	27.73
HORVU7Hr1G120520.1	Barley	cytosol	66.57	27.46
TraesCS2B01G424300.1	Wheat	cytosol	66.57	27.43
TraesCS7B01G482200.1	Wheat	cytosol	66.29	27.41
TraesCS7A01G557600.1	Wheat	cytosol	66.29	27.41
Solyc02g081300.2.1	Tomato	cytosol, nucleus	67.98	27.38
GSMUA_Achr3P13980_001	Banana	cytosol	64.89	27.37
TraesCS2D01G403600.1	Wheat	cytosol	66.57	27.37
TraesCS2A01G406700.1	Wheat	cytosol	66.29	27.31
TraesCS7D01G552800.1	Wheat	cytosol	66.01	27.29
GSMUA_Achr9P21240_001	Banana	cytosol	64.61	27.25
Zm00001d050151_P001	Maize	cytosol	10.39	27.01
Zm00001d014119_P001	Maize	cytosol	11.52	26.8
OQU77175	Sorghum	plastid	67.42	26.76
TraesCSU01G082000.1	Wheat	plastid	64.89	26.61
HORVU6Hr1G094880.6	Barley	cytosol	64.04	26.48
TraesCS6B01G466600.1	Wheat	cytosol	64.33	26.38
Os02t0831500-01	Rice	plastid	62.36	26.24
TraesCS6D01G403800.1	Wheat	cytosol	63.76	26.18
TraesCS4A01G492600.1	Wheat	cytosol	40.45	25.71
CDX72985	Canola	cytosol	65.73	25.05
CDX96472	Canola	cytosol	65.45	24.92
Zm00001d051837_P002	Maize	cytosol	59.55	24.91
CDX68228	Canola	cytosol	65.45	24.79
CDY11107	Canola	cytosol	65.17	24.68
KXG31429	Sorghum	cytosol	57.87	23.87
CDX88838	Canola	endoplasmic reticulum, golgi	49.16	23.55
CDX86250	Canola	cytosol	51.97	23.48
CDY22042	Canola	cytosol, mitochondrion	53.37	23.43
CDY52781	Canola	mitochondrion	52.81	23.18
CDX85398	Canola	cytosol	51.97	22.92
CDX70945	Canola	cytosol	50.28	22.21
CDX92432	Canola	cytosol	48.6	21.49
CDY16569	Canola	cytosol	48.31	21.37
CDX73329	Canola	cytosol	3.37	15.79
CDX94270	Canola	nucleus	14.61	10.99
CDY46981	Canola	cytosol, nucleus, plastid	7.58	7.87
CDX87785	Canola	cytosol	2.53	5.59
CDX89776	Canola	cytosol	16.57	5.55
CDY18270	Canola	cytosol	16.57	5.54
CDX80498	Canola	cytosol	14.04	5.17
CDX88168	Canola	nucleus	13.76	5.1
CDY41124	Canola	cytosol	14.89	5.06
CDX70382	Canola	cytosol	13.48	4.99
CDY35815	Canola	cytosol	13.48	4.97
CDX78411	Canola	cytosol	14.33	4.91
CDX92473	Canola	cytosol	13.2	4.87
CDY45096	Canola	cytosol	12.64	4.63
CDY69825	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	GO:A0A078JZK8	UniProt:A0A078JZK8
EnsemblPlants:CDY71780	ProteinID:CDY71780	ProteinID:CDY71780.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016157	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00020192001	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF379	SUPFAM:SSF53756	InterPro:Sucrose_synth
UniParc:UPI0004EDF03F	SEG:seg	:	:	:	:

Description

BnaCnng74430DBnaCnng74430D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JZK8]

Coordinates

chrLK047467:-:303..2264

Molecular Weight (calculated)

40108.2 Da

IEP (calculated)

4.921

GRAVY (calculated)

-0.150

Length

356 amino acids

Sequence
(BLAST)

001: EAVVIPPNVA FAVRGNPGNW QYVKVNSSDL SVEALSNTQY LKLKELLFDE NWAKDDNALE VDFGALDFTL PRLSLSSSVG NGLSFVFSKL GGRLNDNPQS
101: LVDYLLSLEH QGENLMMNET LNTARKLEMS LILADVFLSE LPKETPFQAF ELRFKEWGFE KGWGENAGKV KETMRILSEI LQAPDPRNID RFFARIPRIF
201: NVVIFSIHGY FGQNDVLGLP DTGGQIVYIL DQVKALEDEL LHRINSQGLN FKPQILVVTR LIPDAKDTKC NQELEPITGT KHSNILRIPF VTENGILRRW
301: VSRFDIYPYL EKFTKDATTK ILDILEGKPD LVIGNYTDGN LVASLMANKL GITQVT

Best Arabidopsis Sequence Match ( AT1G73370.1 )
(BLAST)

001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY

Arabidopsis Description

SUS6Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.