Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G552800.1 | Wheat | cytosol | 98.84 | 98.84 |
| TraesCS7A01G557600.1 | Wheat | cytosol | 98.26 | 98.26 |
| HORVU7Hr1G120520.1 | Barley | cytosol | 97.56 | 97.33 |
| TraesCS2B01G424300.1 | Wheat | cytosol | 94.54 | 94.21 |
| Os04t0249500-00 | Rice | cytosol | 88.15 | 89.93 |
| Os04t0309600-01 | Rice | cytosol, plasma membrane | 87.92 | 89.69 |
| Zm00001d050151_P001 | Maize | cytosol | 13.94 | 87.59 |
| OQU77175 | Sorghum | plastid | 89.2 | 85.62 |
| Zm00001d014119_P001 | Maize | cytosol | 14.98 | 84.31 |
| TraesCS6B01G466600.1 | Wheat | cytosol | 81.42 | 80.76 |
| GSMUA_Achr3P13980_001 | Banana | cytosol | 75.03 | 76.54 |
| GSMUA_Achr9P21240_001 | Banana | cytosol | 74.22 | 75.71 |
| PGSC0003DMT400079728 | Potato | cytosol | 15.21 | 74.43 |
| KRH17270 | Soybean | cytosol | 67.48 | 69.17 |
| KRH72916 | Soybean | cytosol | 67.36 | 69.05 |
| VIT_04s0079g00230.t01 | Wine grape | cytosol | 67.48 | 68.59 |
| PGSC0003DMT400043117 | Potato | cytosol | 66.9 | 68.57 |
| VIT_17s0053g00700.t01 | Wine grape | cytosol | 71.54 | 67.99 |
| CDY71780 | Canola | cytosol, extracellular | 27.41 | 66.29 |
| Solyc02g081300.2.1 | Tomato | cytosol, nucleus | 67.6 | 65.84 |
| KRH30890 | Soybean | cytosol | 63.88 | 65.09 |
| AT5G37180.1 | Thale cress | cytosol | 62.95 | 64.76 |
| Bra039502.1-P | Field mustard | cytosol | 62.83 | 64.64 |
| CDY38565 | Canola | cytosol | 62.83 | 63.95 |
| CDY26996 | Canola | cytosol | 62.6 | 63.71 |
| Solyc03g098290.2.1 | Tomato | cytosol, nucleus | 64.92 | 62.74 |
| KRH09470 | Soybean | cytosol, plastid | 66.67 | 62.39 |
| KRH38924 | Soybean | plastid | 66.2 | 61.89 |
| CDX72985 | Canola | cytosol | 64.81 | 59.74 |
| CDX96472 | Canola | cytosol | 64.58 | 59.47 |
| Bra015995.1-P | Field mustard | cytosol | 65.04 | 59.38 |
| Bra003845.1-P | Field mustard | cytosol | 64.81 | 59.36 |
| AT1G73370.1 | Thale cress | cytosol | 64.69 | 59.13 |
| CDX68228 | Canola | cytosol | 64.46 | 59.04 |
| CDY11107 | Canola | cytosol | 64.34 | 58.94 |
| TraesCS4B01G167500.1 | Wheat | cytosol | 52.96 | 56.37 |
| TraesCS7B01G063400.1 | Wheat | mitochondrion | 52.73 | 54.96 |
| TraesCS2B01G194200.1 | Wheat | golgi | 52.96 | 54.87 |
| TraesCS3B01G461800.1 | Wheat | nucleus | 19.98 | 16.09 |
| TraesCS7B01G434300.1 | Wheat | cytosol | 17.65 | 15.65 |
| TraesCS4B01G091100.1 | Wheat | cytosol | 18.7 | 15.19 |
| TraesCS6B01G173000.2 | Wheat | endoplasmic reticulum, plasma membrane | 17.07 | 14.13 |
Protein Annotations
| KEGG:00500+2.4.1.13 | Gene3D:1.20.120.1230 | MapMan:3.1.4.2 | Gene3D:3.10.450.330 | Gene3D:3.40.50.2000 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005985 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016157 | GO:GO:0016740 | InterPro:Glyco_trans_1 | PFAM:PF00534 | PFAM:PF00862 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF296 | SUPFAM:SSF53756 | InterPro:Sucrose_synth | InterPro:Sucrose_synthase_pln/cyn | TIGRFAMs:TIGR02470 |
| EnsemblPlantsGene:TraesCS7B01G482200 | EnsemblPlants:TraesCS7B01G482200.1 | TIGR:cd03800 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7B:-:740032748..740036881
Molecular Weight (calculated)
98526.7 Da
IEP (calculated)
8.790
GRAVY (calculated)
-0.423
Length
861 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKLSFKRM DSIAETMPDA LQQSRYQMKR CFQRYVSKGR RLLKNQQLVE ELEKSLDDKA EKEKLVEGFL GYIICSTQEA VVLPPFVAFA VRMNPGIWEY
101: VKVHSDDLSV EGITPSEYLK FKETLYDEKW AKDNNSLEVD FGALDLSTPH LTLPSSIGNG MQFISKFMSS KLNDKPESMK PLLDYLLTLN YRGEKLMVND
201: TINTVDKLQT ALLLAEVFVS GLPKFTPYLK FEQRFQEWGL EKGWGENAER CKETLNFLSE VLQAPDPINM EKFFSRVPSI FNIVVFSIHG YFGQEKVLGL
301: PDTGGQVVYI LDQVRSMEEE LLQRIKQQGL HITPKILVLT RLIPDSKGTK CNVELEPVEN TKYSHILRVP FKTEDGKDLR QWVSRFDIYP YLERYTQDAS
401: AKILDILEGK PDLIIGNYTD GNLVASLMSS KLGVTQGTIA HALEKTKYEN SDAKWRELDQ KYHFSCQFTA DMIAMNTTDF IITSTYQEIA GSKEKPGQYE
501: HHYAFTMPGL CRYATGINVF DPKFNIAAPG ADQSVYFPYT QKQKRLTGLH PQIEELLYSK EDTDEHIGYL ADKNKPIIFS MARLDKVKNI TGLVEWYGQN
601: KKVRDLVNLV VVAGLLNAAQ SKDREEIDEI NKMHNLIDKY QLKGQIRWIK AQTDRVRNGE LYRYIADTKG AFVQPALYEA FGLTVIEAMN CGLPTFATNQ
701: GGPAEIIVDG VSGFHINPMN GREAGTKIAD FFQKCKEDPS YWNKVSTAGL QRIYECYTWK IYATKVLNMG LMYGFWRTLN KEERAAKQRY LQMFYNLQYR
801: NLVKTVPRVG EQPPRTAAST STAGAAVVRD EIVVRPKERK PRNRIQRMMT SLLGPKRRAN K
101: VKVHSDDLSV EGITPSEYLK FKETLYDEKW AKDNNSLEVD FGALDLSTPH LTLPSSIGNG MQFISKFMSS KLNDKPESMK PLLDYLLTLN YRGEKLMVND
201: TINTVDKLQT ALLLAEVFVS GLPKFTPYLK FEQRFQEWGL EKGWGENAER CKETLNFLSE VLQAPDPINM EKFFSRVPSI FNIVVFSIHG YFGQEKVLGL
301: PDTGGQVVYI LDQVRSMEEE LLQRIKQQGL HITPKILVLT RLIPDSKGTK CNVELEPVEN TKYSHILRVP FKTEDGKDLR QWVSRFDIYP YLERYTQDAS
401: AKILDILEGK PDLIIGNYTD GNLVASLMSS KLGVTQGTIA HALEKTKYEN SDAKWRELDQ KYHFSCQFTA DMIAMNTTDF IITSTYQEIA GSKEKPGQYE
501: HHYAFTMPGL CRYATGINVF DPKFNIAAPG ADQSVYFPYT QKQKRLTGLH PQIEELLYSK EDTDEHIGYL ADKNKPIIFS MARLDKVKNI TGLVEWYGQN
601: KKVRDLVNLV VVAGLLNAAQ SKDREEIDEI NKMHNLIDKY QLKGQIRWIK AQTDRVRNGE LYRYIADTKG AFVQPALYEA FGLTVIEAMN CGLPTFATNQ
701: GGPAEIIVDG VSGFHINPMN GREAGTKIAD FFQKCKEDPS YWNKVSTAGL QRIYECYTWK IYATKVLNMG LMYGFWRTLN KEERAAKQRY LQMFYNLQYR
801: NLVKTVPRVG EQPPRTAAST STAGAAVVRD EIVVRPKERK PRNRIQRMMT SLLGPKRRAN K
001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY
Arabidopsis Description
SUS6Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3K7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.