Factsheet for TraesCS6B01G466600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G082000.1	Wheat	plastid	96.77	96.77
TraesCS6D01G403800.1	Wheat	cytosol	96.54	96.66
HORVU6Hr1G094880.6	Barley	cytosol	94.7	95.47
TraesCS4A01G492600.1	Wheat	cytosol	61.29	95.0
TraesCS2B01G424300.1	Wheat	cytosol	82.37	82.75
Os02t0831500-01	Rice	plastid	80.65	82.74
TraesCS7B01G482200.1	Wheat	cytosol	80.76	81.42
KXG31429	Sorghum	cytosol	77.3	77.75
Zm00001d051837_P002	Maize	cytosol	76.04	77.56
GSMUA_Achr9P21240_001	Banana	cytosol	71.31	73.34
PGSC0003DMT400079728	Potato	cytosol	14.86	73.3
GSMUA_Achr3P13980_001	Banana	cytosol	70.85	72.87
KRH72916	Soybean	cytosol	66.36	68.57
KRH17270	Soybean	cytosol	65.9	68.1
PGSC0003DMT400043117	Potato	cytosol	64.52	66.67
VIT_04s0079g00230.t01	Wine grape	cytosol	64.86	66.47
KRH30890	Soybean	cytosol	63.59	65.33
VIT_17s0053g00700.t01	Wine grape	cytosol	67.97	65.12
CDY71780	Canola	cytosol, extracellular	26.38	64.33
Bra039502.1-P	Field mustard	cytosol	61.64	63.92
Solyc02g081300.2.1	Tomato	cytosol, nucleus	64.98	63.8
AT5G37180.1	Thale cress	cytosol	61.06	63.32
CDY38565	Canola	cytosol	61.64	63.24
CDY26996	Canola	cytosol	61.52	63.12
Solyc03g098290.2.1	Tomato	cytosol, nucleus	63.36	61.73
KRH38924	Soybean	plastid	65.32	61.56
KRH09470	Soybean	cytosol, plastid	65.09	61.41
CDX96472	Canola	cytosol	61.64	57.22
CDX72985	Canola	cytosol	61.52	57.17
Bra003845.1-P	Field mustard	cytosol	61.75	57.02
Bra015995.1-P	Field mustard	cytosol	61.87	56.95
CDX68228	Canola	cytosol	61.52	56.81
AT1G73370.1	Thale cress	cytosol	61.29	56.48
CDY11107	Canola	cytosol	61.06	56.38
TraesCS4B01G167500.1	Wheat	cytosol	50.92	54.64
TraesCS7B01G063400.1	Wheat	mitochondrion	50.58	53.15
TraesCS2B01G194200.1	Wheat	golgi	50.0	52.23
TraesCS3B01G461800.1	Wheat	nucleus	20.05	16.28
TraesCS7B01G434300.1	Wheat	cytosol	17.63	15.76
TraesCS4B01G091100.1	Wheat	cytosol	19.01	15.57
TraesCS6B01G173000.2	Wheat	endoplasmic reticulum, plasma membrane	17.51	14.62

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016157	GO:GO:0016740	InterPro:Glyco_trans_1	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526
PANTHER:PTHR12526:SF546	SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	EnsemblPlantsGene:TraesCS6B01G466600
EnsemblPlants:TraesCS6B01G466600.1	TIGR:cd03800	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6B:+:716618145..716622161

Molecular Weight (calculated)

98373.8 Da

IEP (calculated)

6.791

GRAVY (calculated)

-0.386

Length

868 amino acids

Sequence
(BLAST)

001: MASSSSSSSY MPLRRSDSVA DMMPEALRQS RYQMKTCFQR YVSKGRRLMK NQQLMEELEA PAGDDRVDKA RLADGFLGYV ICSTQEAVVL PPLVAFAVRT
101: NPGVWEFIRV HSGDLAAEEI TPSAYLKCKE TLYDEKWARD DNSLEVDFGA LDLSTPRLTL PSSIGNGMQF VSRFMSSKLS GKPESMKPLL DYLLALNYRG
201: EKLMISDTLD TADKLQTALL LAEVFVAGLE KSTPYQQFEQ RFQEWGFEKG WGDTAETCRE TLNFLSEVLQ APDPINMEKF FSRVPSVFSI VIFSIHGYFG
301: QEKVLGLPDT GGQVVYILDQ VRALEEELLQ RIRKQGLNVT PKILVLTRLI PDAKGTKCNV ELEPVEHTKH SSILRVPFKT DDGKDLRQWV SRFDIYPYLE
401: RYAQDSSVKI LDILEGKPDM VIGNYTDGNL VASLLSSKLG VTQGTIAHAL EKTKYEDSDV KWREMDHKYH FSCQFTADMI AMNTSDFIIA STYQEIAGSK
501: DKPGQYESHY TFTMPGLCRY ATGVNVFDPK FNIAAPGADQ SVYFPFTQKQ ARLTDLHPQI EELLYSKEDN NEHLGYLGDR SKPIIFSMAR LDKVKNITGL
601: VEWYGENKKL RDLVNLVIVG GLLEPSQSND REEIEEINKM HSLMDKYQLR GQIRWIKAQT ERVRNGELYR CIADTRGAFV QPALYEAFGL TVIEAMNCGL
701: PTFATNQGGP AEIIVNEVSG FHINPLNGKE ASDKIAGFFQ KCKEDPSYWN KMSTAGLQRI YECYTWQIYA TKVLNMGSMY GFWRTLNKEE RQAKQLYLQM
801: FYNLQFRQLV KTVPKVGEQP ARPATGSTAP ARIAPRPRER RPQTRIQRIA TNLLGPVLPT SNFSQDAA

Best Arabidopsis Sequence Match ( AT1G73370.1 )
(BLAST)

001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY

Arabidopsis Description

SUS6Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.