Factsheet for TraesCSU01G082000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G403800.1	Wheat	cytosol	97.0	97.12
TraesCS6B01G466600.1	Wheat	cytosol	96.77	96.77
HORVU6Hr1G094880.6	Barley	cytosol	95.62	96.4
TraesCS4A01G492600.1	Wheat	cytosol	61.41	95.18
Os02t0831500-01	Rice	plastid	80.99	83.1
KXG31429	Sorghum	cytosol	77.53	77.98
Zm00001d051837_P002	Maize	cytosol	76.27	77.79
GSMUA_Achr9P21240_001	Banana	cytosol	72.23	74.29
PGSC0003DMT400079728	Potato	cytosol	14.98	73.86
GSMUA_Achr3P13980_001	Banana	cytosol	71.43	73.46
KRH72916	Soybean	cytosol	67.05	69.29
KRH17270	Soybean	cytosol	66.71	68.93
PGSC0003DMT400043117	Potato	cytosol	65.32	67.5
VIT_04s0079g00230.t01	Wine grape	cytosol	65.09	66.71
KRH30890	Soybean	cytosol	64.29	66.04
VIT_17s0053g00700.t01	Wine grape	cytosol	68.43	65.56
CDY71780	Canola	cytosol, extracellular	26.61	64.89
Solyc02g081300.2.1	Tomato	cytosol, nucleus	65.78	64.59
Bra039502.1-P	Field mustard	cytosol	62.1	64.4
AT5G37180.1	Thale cress	cytosol	61.64	63.92
CDY38565	Canola	cytosol	62.1	63.71
CDY26996	Canola	cytosol	61.87	63.48
Solyc03g098290.2.1	Tomato	cytosol, nucleus	64.06	62.4
KRH09470	Soybean	cytosol, plastid	65.67	61.96
KRH38924	Soybean	plastid	65.44	61.67
CDX96472	Canola	cytosol	61.98	57.54
CDX72985	Canola	cytosol	61.87	57.49
Bra015995.1-P	Field mustard	cytosol	62.21	57.26
Bra003845.1-P	Field mustard	cytosol	61.64	56.91
AT1G73370.1	Thale cress	cytosol	61.64	56.79
CDX68228	Canola	cytosol	61.41	56.7
CDY11107	Canola	cytosol	60.94	56.28
TraesCSU01G044500.2	Wheat	unclear	18.66	15.06

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016157	GO:GO:0016740	InterPro:Glyco_trans_1	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526
PANTHER:PTHR12526:SF546	SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	EnsemblPlantsGene:TraesCSU01G082000
EnsemblPlants:TraesCSU01G082000.1	TIGR:cd03800	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrUn:-:74817523..74821551

Molecular Weight (calculated)

98652.1 Da

IEP (calculated)

6.835

GRAVY (calculated)

-0.403

Length

868 amino acids

Sequence
(BLAST)

001: MASSSSSSSY MPLRRSDSVA DMMPEALRQS RYQMKRCFQR YVSKGRRLMK NQQLMEELEA SAGDDKPEKA RLAEGFLGYV ICSTQEAVVL PPLVAFAVRT
101: NPGVWEFIRV HSGDLSVEEI TPSAYLKCKE TLYDEKWARD DNSLEVDFGA LDLSTPHLTL PSSIGNGMQF VSRFMSSKLS GKPESMKPLL DYLLALNYRG
201: EKLMISDTLD TADKLQTALL LAEVFISSLE KSTPYQQFEQ RFQEWGLEKG WGDTAETCRE TLNFLSEVLQ APDPINMEKF FSRVPSVFNI VIFSIHGYFG
301: QEKVLGLPDT GGQVVYILDQ VRALEQELLQ RIRKQGLNVT PRILVLTRLI PDAKGTKCNV ELEPVEHTKH SSILRVPFKT DDGKDLRQWV SRFDIYPYLE
401: RYAQDSSVKI LDILEGKPDM VIGNYTDGNL VASLLSSKLG VTQGTIAHAL EKTKYEDSDV KWREMDHKYH FSCQFTADMI AMNTSDFIIA STYQEIAGSK
501: DKPGQYESHY AFTMPGLCRY ATGVNVFDPK FNIAAPGADQ SVYFPFTQKQ ARLTDLHPQI EELLYSKEDN DEHLGYLQDR SRPIIFSMAR LDKVKNITGL
601: VEWYGENKKL RDLVNLVIVG GLLEPSQSND REEIEEINKM HSLMDKYQLK GQIRWIKAQT ERVRNGELYR CIADTRGAFV QPALYEAFGL TVIEAMNCGL
701: PTFATNQGGP AEIIVNEVSG FHINPLNGKE ASDKIAAFFQ KCKEDPTYWN KMSTAGLQRI YECYTWQIYA TKVLNMGSMY GFWRTLNKEE RQAKQLYLQM
801: FYNLQFRQLV KTVPKVGEQP AQPTTGSTAP ARIAPRPRER RPRTRIQRIA TNLFGPVLPP SNFSQDAA

Best Arabidopsis Sequence Match ( AT1G73370.1 )
(BLAST)

001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY

Arabidopsis Description

SUS6Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.