Factsheet for GSMUA_Achr3P13980_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079728	Potato	cytosol	16.82	80.68
GSMUA_Achr9P21240_001	Banana	cytosol	78.79	78.79
TraesCS4A01G492600.1	Wheat	cytosol	50.59	76.25
TraesCS7A01G557600.1	Wheat	cytosol	76.9	75.38
Os04t0249500-00	Rice	cytosol	75.24	75.24
HORVU7Hr1G120520.1	Barley	cytosol	76.78	75.09
TraesCS7B01G482200.1	Wheat	cytosol	76.54	75.03
TraesCS7D01G552800.1	Wheat	cytosol	76.42	74.91
TraesCS2B01G424300.1	Wheat	cytosol	76.66	74.88
Os04t0309600-01	Rice	cytosol, plasma membrane	74.88	74.88
TraesCS2A01G406700.1	Wheat	cytosol	76.42	74.65
TraesCS2D01G403600.1	Wheat	cytosol	76.54	74.6
Zm00001d050151_P001	Maize	cytosol	11.97	73.72
OQU77175	Sorghum	plastid	77.01	72.46
Os02t0831500-01	Rice	plastid	72.27	72.1
TraesCSU01G082000.1	Wheat	plastid	73.46	71.43
HORVU6Hr1G094880.6	Barley	cytosol	72.87	71.43
TraesCS6D01G403800.1	Wheat	cytosol	73.22	71.28
TraesCS6B01G466600.1	Wheat	cytosol	72.87	70.85
PGSC0003DMT400043117	Potato	cytosol	70.26	70.6
VIT_04s0079g00230.t01	Wine grape	cytosol	70.26	70.01
Zm00001d014119_P001	Maize	cytosol	12.68	69.93
KRH17270	Soybean	cytosol	69.55	69.88
KRH72916	Soybean	cytosol	69.08	69.4
VIT_17s0053g00700.t01	Wine grape	cytosol	74.05	68.98
Solyc02g081300.2.1	Tomato	cytosol, nucleus	70.85	67.65
Zm00001d051837_P002	Maize	cytosol	67.06	66.51
KXG31429	Sorghum	cytosol	67.54	66.05
KRH30890	Soybean	cytosol	66.11	66.04
Bra039502.1-P	Field mustard	cytosol	65.05	65.59
AT5G37180.1	Thale cress	cytosol	64.93	65.47
CDY26996	Canola	cytosol	65.05	64.89
CDY38565	Canola	cytosol	65.05	64.89
CDY71780	Canola	cytosol, extracellular	27.37	64.89
Solyc03g098290.2.1	Tomato	cytosol, nucleus	66.71	63.19
KRH09470	Soybean	cytosol, plastid	68.36	62.72
KRH38924	Soybean	plastid	67.54	61.89
CDX72985	Canola	cytosol	67.65	61.13
CDX96472	Canola	cytosol	67.65	61.07
Bra015995.1-P	Field mustard	cytosol	68.01	60.87
CDY11107	Canola	cytosol	67.77	60.85
Bra003845.1-P	Field mustard	cytosol	67.65	60.74
AT1G73370.1	Thale cress	cytosol	67.65	60.62
CDX68228	Canola	cytosol	67.42	60.53
GSMUA_Achr3P08200_001	Banana	mitochondrion	12.56	58.56
GSMUA_Achr8P22470_001	Banana	cytosol	55.33	57.73
GSMUA_Achr3P08190_001	Banana	cytosol	41.82	56.57
GSMUA_Achr3P01900_001	Banana	mitochondrion	54.62	56.5
GSMUA_Achr7P19810_001	Banana	mitochondrion	54.38	56.25
GSMUA_Achr6P10890_001	Banana	unclear	54.27	56.2
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	54.27	56.13
GSMUA_Achr2P21870_001	Banana	cytosol	53.67	55.58
GSMUA_Achr4P16070_001	Banana	nucleus	19.79	15.43
GSMUA_Achr4P06050_001	Banana	cytosol	18.72	14.92
GSMUA_Achr9P22510_001	Banana	cytosol	18.25	14.51
GSMUA_Achr6P17480_001	Banana	nucleus	17.89	14.48

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	EnsemblPlantsGene:GSMUA_Achr3G13980_001	EnsemblPlants:GSMUA_Achr3P13980_001	EnsemblPlants:GSMUA_Achr3T13980_001
InterPro:Glyco_trans_1	UniProt:M0SEG5	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF296
SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI000294DCF4	SEG:seg

Description

Sucrose synthase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G13980_001]

Coordinates

chr3:-:13117468..13121181

Molecular Weight (calculated)

94960.4 Da

IEP (calculated)

7.520

GRAVY (calculated)

-0.282

Length

844 amino acids

Sequence
(BLAST)

001: MAAVSLSFKR SDSIAEGMPE ALKESRYQMK KCFARYVSKG KRVMKNPQLM EELEKSIDDE AEKAKVMEGF LGYIICSTQE AVVLPPFVAF AVRPHPGIWE
101: YVKVHSVDLS VDGITPCEYL KNKETIYDEK WATDEHALEV DFGALEPSTP LLTLPSSIGK GAQFISRFIS AKLNASSESM KPLLDYLLAL NHGGQKLMIN
201: NTFDTVNKLQ TALLLAEVFV SGLPKNTPFQ KFEPRFEEWG LEKGWGDTAA TVKETLNCLS EVLQAPDPVN LEKFFGRVPS IFNIVILSPH GYFGQADVLG
301: LPDTGGQIVY ILDQVKAFEE ELLLRIKQQG LTIKPQILVV TRLIPEAKGT KCNQELEPIL NTKHSHILRV PFKTETGVVQ QWVSRFDVYP YLERYAQACL
401: DILQGKPDLI IGNYTDGNLV ASLMATKLGV TQGTIAHALE KTKYEDSDVK WKELEPKYHF SCQFTADMIA MNTTDFIITS TYQEIAGSKD RPGQYESHHA
501: FTLPGLCRFV SGIDVFHPKF NIASPGADQS VYFPYTQKQK RLTSLHPAIE ELLYSKTDNE EHTGYLEDRK KPIIFSMARL DTVKNITGLV EWYGKNKKLR
601: GLVNLVVVAG FLDPSKSKDR EEISEIKKMR SLIEKYQLKG QMRWIAAQTD RVRNGELYRC IADTKGAFVQ PALYEAFGLT VIEAMNCGLP TFATNQGGPA
701: EIIVDGVSGF HIDPTDGEEA SGKMADFFER CKDASYWNKI STAGLQRIYE CYTWKIYATK VLNMGSIYGL WRQLNKEEQL AKEKYLQLFY NLQFRNLAKT
801: VPIATDQAQQ EAKPKPVAIP ASQPSQNPIR KLLAICTRKH KGGQ

Best Arabidopsis Sequence Match ( AT1G73370.1 )
(BLAST)

001: MSSSSQAMLQ KSDSIAEKMP DALKQSRYHM KRCFASFVGG GKKLMKREHL MNEIEKCIED SRERSKILEG LFGYILTCTQ EAAVVPPFVA LAARPNPGFW
101: EYVKVNSGDL TVDEITATDY LKLKESVFDE SWSKDENALE IDFGAIDFTS PRLSLSSSIG KGADYISKFI SSKLGGKSDK LEPLLNYLLR LNHHGENLMI
201: NDDLNTVAKL QKSLMLAVIV VSTYSKHTPY ETFAQRLKEM GFEKGWGDTA ERVKETMIIL SEVLEAPDNG KLDLLFSRLP TVFNVVIFSV HGYFGQQDVL
301: GLPDTGGQVV YILDQVRALE EELLIRINQQ GLGFKPQILV VTRLIPEARG TKCDQELEAI EGTKHSHILR VPFVTNKGVL RQWVSRFDIY PYLERFTQDA
401: TSKILQRLDC KPDLIIGNYT DGNLVASLMA TKLGVTQGTI AHALEKTKYE DSDAKWKELD PKYHFSCQFT ADLIAMNVTD FIITSTYQEI AGSKDRPGQY
501: ESHTAFTMPG LCRVVSGIDV FDPKFNIAAP GADQSVYFPY TEKDKRFTKF HPSIQELLYN EKDNAEHMGY LADREKPIIF SMARLDTVKN ITGLVEWYGK
601: DKRLREMANL VVVAGFFDMS KSNDREEKAE IKKMHDLIEK YKLKGKFRWI AAQTDRYRNS ELYRCIADTK GVFVQPALYE AFGLTVIEAM NCGLPTFATN
701: QGGPAEIIVD GVSGFHIDPN NGDESVTKIG DFFSKCRSDG LYWDNISKGG LKRIYECYTW KIYAEKLLKM GSLYGFWRQV NEDQKKAKKR YIEMLYNLQF
801: KQLTKKVTIP EDKPLPLRLA SLRNLLPKKT TNLGAGSKQK EVTETEKTKQ KSKDGQEQHD VKVGEREVRE GLLAADASER VKKVLESSEE KQKLEKMKIA
901: YGQQHSQGAS PVRNLFWSVV VCLYICYILK QRFFGANSAQ EY

Arabidopsis Description

SUS6Sucrose synthase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3K7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.