Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P22510_001 | Banana | cytosol | 87.44 | 87.28 |
| Os08t0301500-01 | Rice | plasma membrane | 75.35 | 74.86 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 74.03 | 74.52 |
| KRH20178 | Soybean | nucleus | 73.37 | 73.37 |
| CDX92473 | Canola | cytosol | 66.86 | 73.29 |
| CDY35815 | Canola | cytosol | 66.76 | 73.19 |
| KRH03629 | Soybean | endoplasmic reticulum | 73.18 | 73.18 |
| CDX88168 | Canola | nucleus | 66.19 | 73.02 |
| OQU78428 | Sorghum | nucleus | 73.75 | 72.99 |
| CDX80498 | Canola | cytosol | 66.57 | 72.91 |
| TraesCS3D01G013000.1 | Wheat | nucleus | 73.47 | 72.78 |
| Zm00001d050125_P002 | Maize | nucleus | 72.62 | 72.62 |
| Solyc07g007790.2.1 | Tomato | cytosol | 71.95 | 72.3 |
| PGSC0003DMT400071807 | Potato | cytosol | 71.95 | 72.3 |
| TraesCS3A01G015500.1 | Wheat | golgi | 73.09 | 72.27 |
| CDX70382 | Canola | cytosol | 65.63 | 72.25 |
| VIT_04s0008g05730.t01 | Wine grape | cytosol | 72.14 | 72.21 |
| TraesCSU01G044500.2 | Wheat | unclear | 73.28 | 72.12 |
| CDY45096 | Canola | cytosol | 65.63 | 71.5 |
| Bra009830.1-P | Field mustard | nucleus | 70.16 | 70.96 |
| AT5G20280.1 | Thale cress | cytosol | 69.88 | 70.95 |
| Bra002289.1-P | Field mustard | cytosol | 69.78 | 70.92 |
| AT5G11110.1 | Thale cress | cytosol | 70.07 | 70.87 |
| CDX78411 | Canola | cytosol | 69.03 | 70.36 |
| Bra006090.1-P | Field mustard | cytosol | 68.74 | 70.07 |
| Bra020096.1-P | Field mustard | cytosol | 67.23 | 69.13 |
| Solyc08g042000.2.1 | Tomato | nucleus | 67.99 | 68.9 |
| Zm00001d015570_P002 | Maize | cytosol | 62.42 | 68.57 |
| HORVU3Hr1G002280.1 | Barley | plastid | 72.99 | 68.41 |
| KXG29640 | Sorghum | cytosol | 62.04 | 68.15 |
| TraesCS6A01G144800.1 | Wheat | cytoskeleton, cytosol, nucleus | 61.47 | 67.53 |
| TraesCS7A01G518200.1 | Wheat | cytosol | 61.85 | 67.39 |
| TraesCS7D01G508100.1 | Wheat | cytosol | 61.76 | 67.35 |
| TraesCS7B01G434300.1 | Wheat | cytosol | 61.66 | 67.25 |
| Zm00001d036749_P001 | Maize | cytosol | 61.85 | 67.18 |
| TraesCS6D01G133800.1 | Wheat | cytosol | 60.81 | 66.81 |
| KXG20466 | Sorghum | cytosol | 61.57 | 66.53 |
| Os02t0184400-01 | Rice | endoplasmic reticulum, golgi | 61.85 | 64.79 |
| HORVU6Hr1G028330.1 | Barley | endoplasmic reticulum, golgi | 61.76 | 63.37 |
| TraesCS6B01G173000.2 | Wheat | endoplasmic reticulum, plasma membrane | 61.57 | 62.69 |
| Os06t0643800-01 | Rice | plasma membrane | 10.76 | 61.96 |
| Zm00001d046595_P002 | Maize | cytosol | 55.62 | 60.22 |
| HORVU7Hr1G115590.10 | Barley | nucleus | 56.19 | 59.56 |
| PGSC0003DMT400076855 | Potato | cytosol, peroxisome, plastid | 29.27 | 59.39 |
| GSMUA_Achr4P16070_001 | Banana | nucleus | 58.64 | 57.39 |
| GSMUA_Achr6P17480_001 | Banana | nucleus | 52.22 | 53.02 |
| Zm00001d016399_P002 | Maize | extracellular | 7.74 | 52.23 |
| GSMUA_Achr3P08200_001 | Banana | mitochondrion | 5.48 | 32.04 |
| GSMUA_Achr7P19810_001 | Banana | mitochondrion | 16.43 | 21.32 |
| GSMUA_Achr8P22470_001 | Banana | cytosol | 15.86 | 20.77 |
| GSMUA_Achr6P10890_001 | Banana | unclear | 15.68 | 20.37 |
| GSMUA_Achr2P21870_001 | Banana | cytosol | 15.49 | 20.12 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 15.49 | 20.1 |
| GSMUA_Achr9P21240_001 | Banana | cytosol | 15.96 | 20.02 |
| GSMUA_Achr3P01900_001 | Banana | mitochondrion | 15.39 | 19.98 |
| GSMUA_Achr3P13980_001 | Banana | cytosol | 14.92 | 18.72 |
| GSMUA_Achr3P08190_001 | Banana | cytosol | 10.48 | 17.79 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.1000 | Gene3D:3.40.50.2000 | Gene3D:3.90.1070.10 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005985 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016157 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0046524 | EnsemblPlantsGene:GSMUA_Achr4G06050_001 |
| EnsemblPlants:GSMUA_Achr4P06050_001 | EnsemblPlants:GSMUA_Achr4T06050_001 | InterPro:Glyco_trans_1 | InterPro:HAD_sf | InterPro:IPR023214 | UniProt:M0SLH2 |
| PFAM:PF00534 | PFAM:PF00862 | PFAM:PF05116 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF334 | InterPro:SPP_N |
| InterPro:SPS_C | SUPFAM:SSF53756 | InterPro:Sucrose_synth | InterPro:SucrsPsyn_pln | TIGRFAMs:TIGR02468 | UniParc:UPI000295D500 |
| SEG:seg | : | : | : | : | : |
Description
Sucrose-phosphate synthase [Source:GMGC_GENE;Acc:GSMUA_Achr4G06050_001]
Coordinates
chr4:+:4615503..4624020
Molecular Weight (calculated)
118901.0 Da
IEP (calculated)
6.304
GRAVY (calculated)
-0.384
Length
1059 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGNDWINSY LEAILDAGPS IDAAKASLLL RERGRFSPTR YFVEEVITGF DETDLYKTWV RAAAMRSPQE RNTRLENMCW RIWNLARKKK QIEGEEAQGI
0101: SKRRLERERA RRDATADMSE DLSEGEKGDI INDLSAHGDS TKGRMLRISS LDAIEAWASQ YKDKKLYIVL ISIHGLIRGE NMELGRDSDT GGQVKYVVEL
0201: ARALGSMPGV YRVDLLTRQI LAPEVDWSYG EPTEMLTPRS SENFIHETGE SSGAYIIRIP FGPKDKYIPK EHLWPHIQEF VDGALSHVMQ MSRVLGEQIG
0301: GGQPVWPVAI HGHYADAGDS AALLSGVLNV PMLFTGHSLG RDKLEQLLKQ GRQTREEINA TYKITRRIEA EELALDASEI VITSTRQEIE EQWRLYDGFD
0401: VILERKLRAR IKRGVSCYGR YMPRMVVIPP GMEFKHIAAH DVDPDGDPEG NDDNLAFPDP PIWSEIMRFF TNPRKPMILA LSRPDPKKNI TTLVKAFGEC
0501: RPLRELANLT LIMGNRDDID EMSSTNSSVL TSILKLIDKY DLYGQVAYPK HHRQSDVPDI YRLAAKTKGV FINPAFIEPF GLTLIEASAN GLPIVATKNG
0601: GPVDIHKVLD NGILVDPHDQ QAIADALYKL VSDKQLWARC RQNGLKNIHQ FSWPEHCKTY LSKITSCRPR HPQWRRSGDG PEDSEPDSPN DSLRDIQDIS
0701: LNLKLSLDGE KGKDDTVDNA LGSGDVAANG NSNHYVNAVV KLSKDVEQHK IRSSERIDHN SSKMPMLRRR KYILVIAVDS VSDADLIAII KSTFEASSGY
0801: RMSGLIGFIL STRLTISEIH SLLTNGGIVP TDFDAFICNS GSDLYYPSSN SDELLYPSEL PFALDIDYHS QIEYRWGGEG LRKTLVRWAS SVTDKKGEIE
0901: EQVVVEDLEH SSTYCHAFQV KNSSLVPPVK ELRKQMRIQA LRCHVLYSHD GSKLHVIPVL ASRSQALRYL FVRWGIEVSN MVVFVGQSGD TDYEELLGGV
1001: HKTVILNGGF NTAQSELHST RSYLLKDVVA FDSPNILQID SCGANEIQFA LEQLGILKK
0101: SKRRLERERA RRDATADMSE DLSEGEKGDI INDLSAHGDS TKGRMLRISS LDAIEAWASQ YKDKKLYIVL ISIHGLIRGE NMELGRDSDT GGQVKYVVEL
0201: ARALGSMPGV YRVDLLTRQI LAPEVDWSYG EPTEMLTPRS SENFIHETGE SSGAYIIRIP FGPKDKYIPK EHLWPHIQEF VDGALSHVMQ MSRVLGEQIG
0301: GGQPVWPVAI HGHYADAGDS AALLSGVLNV PMLFTGHSLG RDKLEQLLKQ GRQTREEINA TYKITRRIEA EELALDASEI VITSTRQEIE EQWRLYDGFD
0401: VILERKLRAR IKRGVSCYGR YMPRMVVIPP GMEFKHIAAH DVDPDGDPEG NDDNLAFPDP PIWSEIMRFF TNPRKPMILA LSRPDPKKNI TTLVKAFGEC
0501: RPLRELANLT LIMGNRDDID EMSSTNSSVL TSILKLIDKY DLYGQVAYPK HHRQSDVPDI YRLAAKTKGV FINPAFIEPF GLTLIEASAN GLPIVATKNG
0601: GPVDIHKVLD NGILVDPHDQ QAIADALYKL VSDKQLWARC RQNGLKNIHQ FSWPEHCKTY LSKITSCRPR HPQWRRSGDG PEDSEPDSPN DSLRDIQDIS
0701: LNLKLSLDGE KGKDDTVDNA LGSGDVAANG NSNHYVNAVV KLSKDVEQHK IRSSERIDHN SSKMPMLRRR KYILVIAVDS VSDADLIAII KSTFEASSGY
0801: RMSGLIGFIL STRLTISEIH SLLTNGGIVP TDFDAFICNS GSDLYYPSSN SDELLYPSEL PFALDIDYHS QIEYRWGGEG LRKTLVRWAS SVTDKKGEIE
0901: EQVVVEDLEH SSTYCHAFQV KNSSLVPPVK ELRKQMRIQA LRCHVLYSHD GSKLHVIPVL ASRSQALRYL FVRWGIEVSN MVVFVGQSGD TDYEELLGGV
1001: HKTVILNGGF NTAQSELHST RSYLLKDVVA FDSPNILQID SCGANEIQFA LEQLGILKK
0001: MAGNDWVNSY LEAILDVGQG LDDARSSPSL LLRERGRFTP SRYFVEEVIT GYDETDLHRS WVKAVATRSP QERNTRLENM CWRIWNLARQ KKQHEEKEAQ
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
0101: RLAKRRLERE KGRREATADM SEEFSEGEKG DIISDISTHG ESTKPRLPRI NSAESMELWA SQQKGNKLYL VLISLHGLIR GENMELGRDS DTGGQVKYVV
0201: ELARALGSMP GVYRVDLLTR QVSSPDVDYS YGEPTEMLTP RDSEDFSDEM GESSGAYIVR IPFGPKDKYI PKELLWPHIP EFVDGAMSHI MQMSNVLGEQ
0301: VGVGKPIWPS AIHGHYADAG DATALLSGAL NVPMLLTGHS LGRDKLEQLL RQGRLSKEEI NSTYKIMRRI EGEELSLDVS EMVITSTRQE IDEQWRLYDG
0401: FDPILERKLR ARIKRNVSCY GRFMPRMVKI PPGMEFNHIV PHGGDMEDTD GNEEHPTSPD PPIWAEIMRF FSNSRKPMIL ALARPDPKKN ITTLVKAFGE
0501: CRPLRELANL ALIMGNRDGI DEMSSTSSSV LLSVLKLIDK YDLYGQVAYP KHHKQSDVPD IYRLAAKSKG VFINPAIIEP FGLTLIEAAA HGLPMVATKN
0601: GGPVDIHRVL DNGLLVDPHD QQSISEALLK LVADKHLWAK CRQNGLKNIH QFSWPEHCKT YLSRITSFKP RHPQWQSDDG GDNSEPESPS DSLRDIQDIS
0701: LNLKFSFDGS GNDNYMNQEG SSMDRKSKIE AAVQNWSKGK DSRKMGSLER SEVNSGKFPA VRRRKFIVVI ALDFDGEEDT LEATKRILDA VEKERAEGSV
0801: GFILSTSLTI SEVQSFLVSG GLNPNDFDAF ICNSGSDLHY TSLNNEDGPF VVDFYYHSHI EYRWGGEGLR KTLIRWASSL NEKKADNDEQ IVTLAEHLST
0901: DYCYTFTVKK PAAVPPVREL RKLLRIQALR CHVVYSQNGT RINVIPVLAS RIQALRYLFV RWGIDMAKMA VFVGESGDTD YEGLLGGLHK SVVLKGVSCS
1001: ACLHANRSYP LTDVISFESN NVVHASPDSD VRDALKKLEL LKD
Arabidopsis Description
SPS1Sucrose-phosphate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q94BT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.