Factsheet for GSMUA_Achr2P21870_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	94.72	94.61
GSMUA_Achr6P10890_001	Banana	unclear	94.6	94.6
GSMUA_Achr3P01900_001	Banana	mitochondrion	93.99	93.87
HORVU0Hr1G019020.1	Barley	cytosol	15.83	86.58
HORVU5Hr1G050660.1	Barley	cytosol	4.17	85.0
Zm00001d047253_P003	Maize	cytosol	84.29	84.19
OQU92441	Sorghum	cytosol	83.93	83.82
Os03t0401300-01	Rice	extracellular	83.56	83.46
Os07t0616800-01	Rice	cytosol	83.31	83.21
HORVU2Hr1G030870.1	Barley	plasma membrane	83.19	83.09
TraesCS7D01G036600.2	Wheat	golgi	82.82	82.82
HORVU7Hr1G007220.8	Barley	cytosol	82.82	82.82
TraesCS7A01G040900.2	Wheat	cytosol	82.7	82.7
TraesCS4A01G446700.1	Wheat	cytosol	82.7	82.7
KXG19528	Sorghum	mitochondrion	81.1	82.42
TraesCS2D01G175600.1	Wheat	golgi, unclear	83.8	82.09
HORVU7Hr1G033230.2	Barley	mitochondrion	81.47	82.08
TraesCS2A01G168200.1	Wheat	golgi, unclear	83.68	82.07
TraesCS7A01G158900.1	Wheat	golgi, nucleus	81.35	82.05
TraesCS2B01G194200.1	Wheat	golgi	83.56	81.95
GSMUA_Achr7P19810_001	Banana	mitochondrion	81.96	81.86
Os06t0194900-03	Rice	extracellular	80.86	81.56
Zm00001d045042_P014	Maize	cytosol, mitochondrion	81.35	80.66
TraesCS7B01G063400.1	Wheat	mitochondrion	80.86	79.78
TraesCS7D01G159800.1	Wheat	mitochondrion	80.74	79.66
KRH19379	Soybean	cytosol	75.95	76.89
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	75.58	76.52
VIT_11s0016g00470.t01	Wine grape	cytosol	76.07	76.07
CDX88838	Canola	endoplasmic reticulum, golgi	69.2	75.91
KRH12615	Soybean	endoplasmic reticulum	74.6	75.43
PGSC0003DMT400007505	Potato	cytosol	73.74	74.66
Solyc12g009300.1.1	Tomato	nucleus	73.5	74.41
Solyc07g042550.2.1	Tomato	extracellular	73.5	74.41
KRH37557	Soybean	endoplasmic reticulum	73.86	74.32
Bra002332.1-P	Field mustard	cytosol	71.66	74.3
AT3G43190.1	Thale cress	cytosol	73.5	74.13
CDY16569	Canola	cytosol	73.01	73.91
CDX92432	Canola	cytosol	72.88	73.79
Bra006578.1-P	Field mustard	cytosol	72.76	73.57
AT5G20830.1	Thale cress	cytosol	72.88	73.51
CDX70945	Canola	cytosol	72.52	73.33
PGSC0003DMT400035262	Potato	cytosol	72.64	73.27
GSMUA_Achr8P22470_001	Banana	cytosol	71.17	71.69
GSMUA_Achr3P08200_001	Banana	mitochondrion	15.83	71.27
GSMUA_Achr3P08190_001	Banana	cytosol	53.37	69.71
PGSC0003DMT400035264	Potato	cytosol	66.26	67.25
Solyc07g042520.2.1	Tomato	cytosol, extracellular	65.77	66.75
GSMUA_Achr3P13980_001	Banana	cytosol	55.58	53.67
GSMUA_Achr9P21240_001	Banana	cytosol	55.34	53.44
GSMUA_Achr4P06050_001	Banana	cytosol	20.12	15.49
GSMUA_Achr6P17480_001	Banana	nucleus	19.75	15.44
GSMUA_Achr4P16070_001	Banana	nucleus	20.49	15.43
GSMUA_Achr9P22510_001	Banana	cytosol	20.0	15.36

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	EnsemblPlantsGene:GSMUA_Achr2G21870_001	EnsemblPlants:GSMUA_Achr2P21870_001	EnsemblPlants:GSMUA_Achr2T21870_001
InterPro:Glyco_trans_1	UniProt:M0SA28	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF398
SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI0002948442	SEG:seg

Description

Sucrose synthase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr2G21870_001]

Coordinates

chr2:+:21187146..21191516

Molecular Weight (calculated)

92791.1 Da

IEP (calculated)

6.544

GRAVY (calculated)

-0.268

Length

815 amino acids

Sequence
(BLAST)

001: MPQRSLTRAH SVRERIGDSL SSHPNELVAL FSRFIHQGKG MLQPHQLLAE YAAAFSEADK EKLKDGAFED VIKAAQEAIV IPPWVALAIR PRPGVWEYVR
101: VNISELAVEE LTVPEYLHFK EELVDGSSQN NFVLELDFEP FNASFPRPSL SKSIGNGVQF LNRHLSSKLF QDKESLYPLL NFLRKHNYKG MSMMLNDRIQ
201: SLSALRAALR KAEQHLLSIP SDTPYSEFHH RFQELGLEKG WGDKSQRVYE NIHLLLDLLE APDPTTLETF LGTIPMMFNV VILSPHGYFA QANVLGYPDT
301: GGQVVYILDQ VRALENEMLL RIKRQGLDIT PRILIVSRLL PDAVGTTCGQ RLEKVLGTEH THILRVPFRT DNGIVRKWIS RFEVWPYLET YTEDVANELA
401: AELQATPDLI IGNYSDGNLV STLLAHKLGV TQCTIAHALE KTKYPNSDIY WKKFEDQYHF SCQFTADLIA MNHADFIITS TFQEIAGSKD TVGQYESHTA
501: FTLPGLYRVV HGIDVFDPKF NIVSPGADLS IYFPYTEKHK RLTSLHPEIE ELLFNPVDNT EHKGVLNDKK KPIIFSMARL DRVKNLTGLV EFYGRSDRLK
601: ELANLVVVCG DHGKESKDLE EQAEFKKMYS LIEKYNLHGH FRWISAQMNR VRNGELYRYI ADTKGVFVQP AFYEAFGLTV VESMTCGLPT FATVHGGPGE
701: IIVDGVSGYH IDPYQGDKAA EIVTNFFDKC KEDPSHWDKI SLGGLQRIEE KYTWKLYSER LMTLTGVYGF WKYVSNLDRR ETRRYLEMFY ALKYRNLAVS
801: VPLAVEGEAA VNGAK

Best Arabidopsis Sequence Match ( AT3G43190.2 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.