Factsheet for Zm00001d047253_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92441	Sorghum	cytosol	99.14	99.14
Os03t0401300-01	Rice	extracellular	95.34	95.34
HORVU7Hr1G007220.8	Barley	cytosol	94.36	94.48
TraesCS7D01G036600.2	Wheat	golgi	94.36	94.48
TraesCS7A01G040900.2	Wheat	cytosol	94.36	94.48
TraesCS4A01G446700.1	Wheat	cytosol	94.36	94.48
HORVU0Hr1G019020.1	Barley	cytosol	16.91	92.62
HORVU5Hr1G050660.1	Barley	cytosol	4.41	90.0
GSMUA_Achr6P10890_001	Banana	unclear	84.31	84.42
GSMUA_Achr2P21870_001	Banana	cytosol	84.19	84.29
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	83.95	83.95
GSMUA_Achr3P01900_001	Banana	mitochondrion	82.6	82.6
GSMUA_Achr7P19810_001	Banana	mitochondrion	80.15	80.15
Zm00001d045042_P014	Maize	cytosol, mitochondrion	79.04	78.47
KRH19379	Soybean	cytosol	75.49	76.52
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	75.37	76.4
VIT_11s0016g00470.t01	Wine grape	cytosol	75.49	75.58
KRH12615	Soybean	endoplasmic reticulum	74.51	75.43
CDX88838	Canola	endoplasmic reticulum, golgi	68.26	74.97
PGSC0003DMT400007505	Potato	cytosol	73.65	74.66
Solyc12g009300.1.1	Tomato	nucleus	73.65	74.66
KRH37557	Soybean	endoplasmic reticulum	74.02	74.57
AT3G43190.1	Thale cress	cytosol	73.28	74.01
Solyc07g042550.2.1	Tomato	extracellular	72.79	73.79
Bra002332.1-P	Field mustard	cytosol	70.83	73.54
CDY16569	Canola	cytosol	72.3	73.29
PGSC0003DMT400035262	Potato	cytosol	72.55	73.27
CDX92432	Canola	cytosol	72.06	73.04
Bra006578.1-P	Field mustard	cytosol	71.81	72.7
CDX70945	Canola	cytosol	71.57	72.46
AT5G20830.1	Thale cress	cytosol	71.08	71.78
Zm00001d029091_P003	Maize	cytosol	69.36	68.69
Solyc07g042520.2.1	Tomato	cytosol, extracellular	65.44	66.5
PGSC0003DMT400035264	Potato	cytosol	65.44	66.5
Zm00001d029087_P002	Maize	cytosol	69.0	66.31
Zm00001d010801_P001	Maize	cytosol	17.89	59.59
Zm00001d051837_P002	Maize	cytosol	50.61	48.53
Zm00001d014119_P001	Maize	cytosol	6.62	35.29
Zm00001d050151_P001	Maize	cytosol	5.64	33.58
Zm00001d012036_P001	Maize	nucleus	20.71	15.82
Zm00001d015570_P002	Maize	cytosol	18.5	15.66
Zm00001d042353_P003	Maize	nucleus	20.47	15.48
Zm00001d036749_P001	Maize	cytosol	18.26	15.28
Zm00001d050125_P002	Maize	nucleus	19.73	15.2
Zm00001d046595_P002	Maize	cytosol	17.03	14.21
Zm00001d016399_P002	Maize	extracellular	2.7	14.01
Zm00001d048979_P001	Maize	cytosol	16.79	13.42

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	EntrezGene:542247
ProteinID:AQL05985.1	ProteinID:AQL05986.1	ProteinID:AQL05987.1	ProteinID:AQL05989.1	ProteinID:AQL05990.1	ProteinID:AQL05993.1
ProteinID:AQL05994.1	ProteinID:AQL05997.1	ProteinID:AQL06001.1	EMBL:BT063877	EMBL:BT069288	UniProt:C0P6F8
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010037	GO:GO:0016157	GO:GO:0016740	GO:GO:0016757
InterPro:Glyco_trans_1	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF398	SUPFAM:SSF53756
InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI0001948C6B	EnsemblPlantsGene:Zm00001d047253	EnsemblPlants:Zm00001d047253_P003
EnsemblPlants:Zm00001d047253_T003	:	:	:	:	:

Description

sucrose synthase1 sucrose synthase1

Coordinates

chr9:-:124178172..124184872

Molecular Weight (calculated)

92930.4 Da

IEP (calculated)

6.458

GRAVY (calculated)

-0.282

Length

816 amino acids

Sequence
(BLAST)

001: MGEGAGDRVL SRLHSVRERI GDSLSAHPNE LVAVFTRLKN LGKGMLQPHQ IIAEYNNAIP EAEREKLKDG AFEDVLRAAQ EAIVIPPWVA LAIRPRPGVW
101: EYVRVNVSEL AVEELRVPEY LQFKEQLVEE GPNNNFVLEL DFEPFNASFP RPSLSKSIGN GVQFLNRHLS SKLFHDKESM YPLLNFLRAH NYKGMTMMLN
201: DRIRSLSALQ GALRKAEEHL STLQADTPYS EFHHRFQELG LEKGWGDCAK RAQETIHLLL DLLEAPDPST LEKFLGTIPM VFNVVILSPH GYFAQANVLG
301: YPDTGGQVVY ILDQVRAMEN EMLLRIKQCG LDITPKILIV TRLLPDATGT TCGQRLEKVL GTEHCHILRV PFRTENGIVR KWISRFEVWP YLETYTDDVA
401: HEIAGELQAN PDLIIGNYSD GNLVACLLAH KMGVTHCTIA HALEKTKYPN SDLYWKKFED HYHFSCQFTT DLIAMNHADF IITSTFQEIA GNKDTVGQYE
501: SHMAFTMPGL YRVVHGIDVF DPKFNIVSPG ADLSIYFPYT ESHKRLTSLH PEIEELLYSQ TENTEHKFVL NDRNKPIIFS MARLDRVKNL TGLVELYGRN
601: KRLQELVNLV VVCGDHGNPS KDKEEQAEFK KMFDLIEQYN LNGHIRWISA QMNRVRNGEL YRYICDTKGA FVQPAFYEAF GLTVVEAMTC GLPTFATAYG
701: GPAEIIVHGV SGYHIDPYQG DKASALLVDF FDKCQADPSH WSKISQGGLQ RIEEKYTWKL YSERLMTLTG VYGFWKYVSN LERRETRRYL EMLYALKYRT
801: MASTVPLAVE GEPSSK

Best Arabidopsis Sequence Match ( AT3G43190.1 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.