Factsheet for Zm00001d045042_P014

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19528	Sorghum	mitochondrion	95.62	98.0
Os06t0194900-03	Rice	extracellular	92.21	93.81
HORVU7Hr1G033230.2	Barley	mitochondrion	91.73	93.2
TraesCS7A01G158900.1	Wheat	golgi, nucleus	91.24	92.82
TraesCS7B01G063400.1	Wheat	mitochondrion	91.0	90.56
TraesCS7D01G159800.1	Wheat	mitochondrion	90.88	90.44
GSMUA_Achr7P19810_001	Banana	mitochondrion	80.78	81.37
GSMUA_Achr3P01900_001	Banana	mitochondrion	80.78	81.37
GSMUA_Achr2P21870_001	Banana	cytosol	80.66	81.35
GSMUA_Achr6P10890_001	Banana	unclear	80.05	80.74
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	79.93	80.51
Zm00001d047253_P003	Maize	cytosol	78.47	79.04
CDX88838	Canola	endoplasmic reticulum, golgi	68.61	75.91
KRH19379	Soybean	cytosol	74.33	75.9
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	73.97	75.53
KRH12615	Soybean	endoplasmic reticulum	73.84	75.31
AT3G43190.1	Thale cress	cytosol	73.84	75.12
VIT_11s0016g00470.t01	Wine grape	cytosol	73.97	74.6
KRH37557	Soybean	endoplasmic reticulum	73.48	74.57
PGSC0003DMT400007505	Potato	cytosol	72.99	74.53
Solyc12g009300.1.1	Tomato	nucleus	72.51	74.04
Bra002332.1-P	Field mustard	cytosol	70.44	73.66
CDX70945	Canola	cytosol	72.02	73.45
Bra006578.1-P	Field mustard	cytosol	72.02	73.45
AT5G20830.1	Thale cress	cytosol	72.14	73.39
CDY16569	Canola	cytosol	71.78	73.29
Solyc07g042550.2.1	Tomato	extracellular	71.65	73.17
CDX92432	Canola	cytosol	71.65	73.17
PGSC0003DMT400035262	Potato	cytosol	71.41	72.65
Zm00001d029091_P003	Maize	cytosol	68.86	68.69
Zm00001d029087_P002	Maize	cytosol	68.49	66.31
PGSC0003DMT400035264	Potato	cytosol	64.36	65.88
Solyc07g042520.2.1	Tomato	cytosol, extracellular	64.11	65.63
Zm00001d010801_P001	Maize	cytosol	17.52	58.78
Zm00001d051837_P002	Maize	cytosol	51.46	49.71
Zm00001d014119_P001	Maize	cytosol	6.45	34.64
Zm00001d050151_P001	Maize	cytosol	5.72	34.31
Zm00001d015570_P002	Maize	cytosol	19.34	16.49
Zm00001d012036_P001	Maize	nucleus	21.29	16.39
Zm00001d050125_P002	Maize	nucleus	20.8	16.15
Zm00001d042353_P003	Maize	nucleus	21.17	16.13
Zm00001d036749_P001	Maize	cytosol	18.73	15.79
Zm00001d046595_P002	Maize	cytosol	17.76	14.93
Zm00001d048979_P001	Maize	cytosol	17.15	13.81
Zm00001d016399_P002	Maize	extracellular	2.55	13.38

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	EntrezGene:542365
UniProt:A0A1D6NT56	ProteinID:AQL01395.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0005985	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628
GO:GO:0009791	GO:GO:0009987	GO:GO:0010431	GO:GO:0016043	GO:GO:0016157	GO:GO:0016740
GO:GO:0016757	GO:GO:0034059	GO:GO:0051262	InterPro:Glyco_trans_1	PFAM:PF00534	PFAM:PF00862
PANTHER:PTHR12526	PANTHER:PTHR12526:SF369	SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470
UniParc:UPI0008427827	EnsemblPlantsGene:Zm00001d045042	EnsemblPlants:Zm00001d045042_P014	EnsemblPlants:Zm00001d045042_T014	SEG:seg	:

Description

shrunken1Sucrose synthase 1

Coordinates

chr9:+:10907826..10912915

Molecular Weight (calculated)

94078.1 Da

IEP (calculated)

6.655

GRAVY (calculated)

-0.262

Length

822 amino acids

Sequence
(BLAST)

001: MESVLLRQKI NPINILNHRA MAAKLTRLHS LRERLGATFS SHPNELIALF SRYVHQGKGM LQRHQLLAEF DALFDSDKEK YAPFEDILRA AQEAIVLPPW
101: VALAIRPRPG VWDYIRVNVS ELAVEELSVS EYLAFKEQLV DGQSNSNFVL ELDFEPFNAS FPRPSMSKSI GNGVQFLNRH LSSKLFQDKE SLYPLLNFLK
201: AHNYKGTTMM LNDRIQSLRG LQSSLRKAEE YLLSVPQDTP YSEFNHRFQE LGLEKGWGDT AKRVLDTLHL LLDLLEAPDP ANLEKFLGTI PMMFNVVILS
301: PHGYFAQSNV LGYPDTGGQV VYILDQVRAL ENEMLLRIKQ QGLDITPKIL IVTRLLPDAA GTTCGQRLEK VIGTEHTDII RVPFRNENGI LRKWISRFDV
401: WPYLETYTED VSSEIMKEMQ AKPDLIIGNY SDGNLVATLL AHKLGVTQCT IAHALEKTKY PNSDIYLDKF DSQYHFSCQF TADLIAMNHT DFIITSTFQE
501: IAGSKDTVGQ YESHIAFTLP GLYRVVHGID VFDPKFNIVS PGADMSVYYP YTETDKRLTA FHPEIEELIY SDVENSEHKF VLKDKKKPII FSMARLDRVK
601: NMTGLVEMYG KNARLRELAN LVIVAGDHGK ESKDREEQAE FKKMYSLIDE YKLKGHIRWI SAQMNRVRNG ELYRYICDTK GAFVQPAFYE AFGLTVIESM
701: TCGLPTIATC HGGPAEIIVD GVSGLHIDPY HSDKAADILV NFFDKCKADP SYWDKISQGG LQRIYEKYTW KLYSERLMTL TGVYGFWKYV SNLERRETRR
801: YIEMFYALKY RSLASQVPLS FD

Best Arabidopsis Sequence Match ( AT3G43190.2 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.