Factsheet for PGSC0003DMT400035262

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g042550.2.1	Tomato	extracellular	97.4	97.76
PGSC0003DMT400007505	Potato	cytosol	90.59	90.93
KRH19379	Soybean	cytosol	80.69	80.99
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	80.32	80.62
HORVU0Hr1G019020.1	Barley	cytosol	14.85	80.54
VIT_11s0016g00470.t01	Wine grape	cytosol	81.19	80.49
KRH12615	Soybean	endoplasmic reticulum	78.96	79.16
AT3G43190.1	Thale cress	cytosol	79.08	79.08
CDX88838	Canola	endoplasmic reticulum, golgi	72.65	79.0
KRH37557	Soybean	endoplasmic reticulum	78.84	78.64
Bra002332.1-P	Field mustard	cytosol	75.5	77.61
CDY16569	Canola	cytosol	77.23	77.52
HORVU5Hr1G050660.1	Barley	cytosol	3.84	77.5
CDX70945	Canola	cytosol	77.1	77.3
CDX92432	Canola	cytosol	76.98	77.27
Bra006578.1-P	Field mustard	cytosol	76.98	77.17
AT5G20830.1	Thale cress	cytosol	76.49	76.49
KXG19528	Sorghum	mitochondrion	72.9	73.44
GSMUA_Achr6P10890_001	Banana	unclear	74.01	73.37
GSMUA_Achr7P19810_001	Banana	mitochondrion	73.89	73.16
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	73.89	73.16
OQU92441	Sorghum	cytosol	73.51	72.79
Os03t0401300-01	Rice	extracellular	73.51	72.79
GSMUA_Achr3P01900_001	Banana	mitochondrion	73.39	72.67
GSMUA_Achr2P21870_001	Banana	cytosol	73.27	72.64
Zm00001d047253_P003	Maize	cytosol	73.27	72.55
TraesCS7A01G158900.1	Wheat	golgi, nucleus	72.52	72.52
HORVU7Hr1G007220.8	Barley	cytosol	73.02	72.39
TraesCS7D01G036600.2	Wheat	golgi	73.02	72.39
HORVU7Hr1G033230.2	Barley	mitochondrion	72.4	72.31
Os06t0194900-03	Rice	extracellular	72.28	72.28
TraesCS7A01G040900.2	Wheat	cytosol	72.9	72.27
TraesCS4A01G446700.1	Wheat	cytosol	72.9	72.27
PGSC0003DMT400035264	Potato	cytosol	71.66	72.1
HORVU2Hr1G030870.1	Barley	plasma membrane	72.65	71.94
Os07t0616800-01	Rice	cytosol	72.65	71.94
Zm00001d045042_P014	Maize	cytosol, mitochondrion	72.65	71.41
TraesCS7B01G063400.1	Wheat	mitochondrion	72.65	71.07
TraesCS7D01G159800.1	Wheat	mitochondrion	72.65	71.07
TraesCS2A01G168200.1	Wheat	golgi, unclear	72.77	70.76
TraesCS2B01G194200.1	Wheat	golgi	72.77	70.76
TraesCS2D01G175600.1	Wheat	golgi, unclear	72.65	70.55
PGSC0003DMT400079728	Potato	cytosol	14.98	68.75
PGSC0003DMT400017087	Potato	cytosol	68.44	68.19
PGSC0003DMT400043117	Potato	cytosol	53.59	51.55
PGSC0003DMT400049042	Potato	cytosol	3.34	18.88
PGSC0003DMT400071807	Potato	cytosol	20.17	15.46
PGSC0003DMT400067951	Potato	nucleus	19.31	14.66
PGSC0003DMT400049047	Potato	golgi, mitochondrion, plastid	8.42	12.21
PGSC0003DMT400076855	Potato	cytosol, peroxisome, plastid	6.19	9.58

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	EntrezGene:102577712	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_1	UniProt:M1B217
PFAM:PF00534	PFAM:PF00862	EnsemblPlantsGene:PGSC0003DMG400013546	PGSC:PGSC0003DMG400013546	EnsemblPlants:PGSC0003DMT400035262	PANTHER:PTHR12526
PANTHER:PTHR12526:SF391	SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI000294AEA1

Description

Sucrose synthase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400013546]

Coordinates

chr7:-:40641679..40645629

Molecular Weight (calculated)

92956.2 Da

IEP (calculated)

6.487

GRAVY (calculated)

-0.225

Length

808 amino acids

Sequence
(BLAST)

001: MAERVLTRVH SLRERLDATL AAHRNEILLF LSRIESHGKG ILKPHQLLAE FESIHKEDKD KLNDHAFEEV LKSTQEAIVL PPWVALAIRL RPGVWEYVRV
101: NVNALIVEEL TVPEFLQFKE ELVNGTSNDN FVLELDFEPF TASFPKPTLT KSIGNGVEFL NRHLSAKMFH DKESMTPLLE FLRVHHYKGK TMMLNDRIQN
201: LYTLQKVLRK AEEYLTTLSP ETSYSAFEHK FQEIGLERGW GDTAERVLEM ICMLLDLLEA PDSCTLEKFL SRIPMVFNVV ILSPHGYFAQ ENVLGYPDTG
301: GQVVYILDQV PALEREMLKR IKEQGLDIKP RILIVTRLLP DAVGTTCGQR LEKVFGTEHS HILRVPFRTE KGIVRKWISR FEVWPYMETF IEDVGKEITA
401: ELQAKPDLII GNYSEGNLAA SLLAHKLGVT QCTIAHALEK TKYPDSDIYL NKFDEKYHFS AQFTADLIAM NHTDFIITST FQEIAGSKDT VGQYESHMAF
501: TMPGLYRVVH GIDVFDPKFN IVSPGADVNL YFPYSEKEKR LTTFHPEIED LLFSDVENEE HLCVLKNRNK PIIFTMARLD RVKNLTGLVE WYAKNPRLRE
601: LVNLVVVGGD RRKESKDLEE QAEMKKMYEL IKTHNLNGQF RWISSQMNRV RNGELYRYIA DTRGAFVQPA FYEAFGLTVV EAMSCGLPTF ATNQGGPAEI
701: IVHGKSGFQI DPYHGEQAAD LLADFFEKCK VDPSHWEAIS EGGLKRIQEK YTWQIYSDRL LTLAAVYGFW KHVSKLDRLE IRRYLEMFYA LKFRKLVSLS
801: AFCTFPIV

Best Arabidopsis Sequence Match ( AT3G43190.2 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.