CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045042_P014	Maize	cytosol, mitochondrion	98.0	95.62
Os06t0194900-03	Rice	extracellular	94.64	93.94
HORVU7Hr1G033230.2	Barley	mitochondrion	94.14	93.33
TraesCS7A01G158900.1	Wheat	golgi, nucleus	93.64	92.95
TraesCS7B01G063400.1	Wheat	mitochondrion	93.27	90.56
TraesCS7D01G159800.1	Wheat	mitochondrion	93.14	90.44
GSMUA_Achr7P19810_001	Banana	mitochondrion	83.42	81.99
GSMUA_Achr3P01900_001	Banana	mitochondrion	82.67	81.25
GSMUA_Achr2P21870_001	Banana	cytosol	82.42	81.1
GSMUA_Achr6P10890_001	Banana	unclear	82.29	80.98
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	82.04	80.64
OQU92441	Sorghum	cytosol	80.42	79.04
KRH19379	Soybean	cytosol	76.31	76.02
CDX88838	Canola	endoplasmic reticulum, golgi	70.07	75.64
KRH12615	Soybean	endoplasmic reticulum	75.94	75.56
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	75.81	75.53
PGSC0003DMT400007505	Potato	cytosol	75.31	75.03
KRH37557	Soybean	endoplasmic reticulum	75.56	74.81
AT3G43190.1	Thale cress	cytosol	75.31	74.75
VIT_11s0016g00470.t01	Wine grape	cytosol	75.81	74.6
Solyc12g009300.1.1	Tomato	nucleus	74.81	74.53
Solyc07g042550.2.1	Tomato	extracellular	73.69	73.42
Bra002332.1-P	Field mustard	cytosol	71.95	73.41
Bra006578.1-P	Field mustard	cytosol	73.57	73.2
CDX70945	Canola	cytosol	73.57	73.2
AT5G20830.1	Thale cress	cytosol	73.69	73.14
CDY16569	Canola	cytosol	73.32	73.04
CDX92432	Canola	cytosol	73.19	72.92
PGSC0003DMT400035262	Potato	cytosol	73.44	72.9
EER92301	Sorghum	cytosol	70.2	69.59
PGSC0003DMT400035264	Potato	cytosol	66.21	66.13
Solyc07g042520.2.1	Tomato	cytosol, extracellular	65.71	65.63
OQU77175	Sorghum	plastid	56.73	50.72
KXG31429	Sorghum	cytosol	52.24	48.55
KXG29640	Sorghum	cytosol	19.95	16.6
OQU78428	Sorghum	nucleus	21.95	16.45
EES04111	Sorghum	nucleus	21.95	16.28
KXG20466	Sorghum	cytosol	19.83	16.22
KXG28137	Sorghum	cytosol	19.95	14.95

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	ProteinID:ACM69042.1
ProteinID:AEX98034.1	UniProt:B9VAS9	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0005985	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009791	GO:GO:0009987
GO:GO:0010431	GO:GO:0016043	GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	GO:GO:0051262
InterPro:Glyco_trans_1	EnsemblPlants:KXG19528	ProteinID:KXG19528	ProteinID:KXG19528.1	ProteinID:OQU75995.1	ProteinID:OQU75996.1
PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF369	MetaCyc:PWY-3801	EnsemblPlantsGene:SORBI_3010G072300
SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI000192BB78	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:5859074..5867276

Molecular Weight (calculated)

91716.9 Da

IEP (calculated)

6.145

GRAVY (calculated)

-0.250

Length

802 amino acids

Sequence
(BLAST)

001: MAAKLTRLHS LRERLGATFS SHPNELIALF SRYVNQGKGM LQRHQLLAEF DALFDSDKEK YAPFEDFLRA AQEAIVLPPW VALAIRPRPG VWDYIRVNVS
101: ELAVEELSVS EYLAFKEQLV DGNSNSNFVL ELDFEPFNAS FPRPSMSKSI GNGVQFLNRH LSSKLFQDKE SLYPLLNFLK AHNYKGTTMM LNDRIQSLRG
201: LQSSLRKAEE YLLSVPQDTP YSEFNHRFQE LGLEKGWGDT AKRVLDTLHL LLDLLEAPDP ANLEKFLGTI PMMFNVVILS PHGYFAQSNV LGYPDTGGQV
301: VYILDQVRAL ENEMLLRIKQ QGLDITPKIL IVTRLLPDAV GTTCGQRLEK VIGTEHTDII RIPFRNENGI LRKWISRFDV WPYLETYTED VASEIMLEMQ
401: AKPDLIVGNY SDGNLVATLL AHKLGVTQCT IAHALEKTKY PNSDIYLDKF DSQYHFSCQF TADLIAMNHT DFIITSTFQE IAGSKDTVGQ YESHIAFTLP
501: GLYRVVHGID VFDPKFNIVS PGADMSVYYP YTETDKRLTA FHPEIEELIY SDVENDEHKF VLKDKNKPII FSMARLDRVK NMTGLVEMYG KNARLRELAN
601: LVIVAGDHGK ESKDREEQAE FKKMYSLIDE YNLKGHIRWI SAQMNRVRNA ELYRYICDTK GAFVQPAFYE AFGLTVIESM TCGLPTIATC HGGPAEIIVD
701: GVSGLHIDPY HSDKAADILV NFFEKCKADP SYWDKISQGG LQRIYEKYTW KLYSERLMTL TGVYGFWKYV SNLERRETRR YLEMFYALKY RSLASAVPLS
801: YD

Best Arabidopsis Sequence Match ( AT3G43190.2 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.