Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
endoplasmic reticulum:
23041469
endoplasmic reticulum: 27224218 endoplasmic reticulum: 28499913 |
msms PMID:
23041469
doi
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH12615 | Soybean | endoplasmic reticulum | 97.41 | 97.89 |
KRH19379 | Soybean | cytosol | 88.52 | 89.07 |
KRH02557 | Soybean | cytosol, endoplasmic reticulum, extracellular, mitochondrion | 87.65 | 88.2 |
CDX88838 | Canola | endoplasmic reticulum, golgi | 75.8 | 82.64 |
HORVU0Hr1G019020.1 | Barley | cytosol | 15.19 | 82.55 |
AT3G43190.1 | Thale cress | cytosol | 82.35 | 82.55 |
CDX92432 | Canola | cytosol | 81.85 | 82.36 |
Bra002332.1-P | Field mustard | cytosol | 79.88 | 82.32 |
CDY16569 | Canola | cytosol | 81.48 | 81.99 |
AT5G20830.1 | Thale cress | cytosol | 81.73 | 81.93 |
VIT_11s0016g00470.t01 | Wine grape | cytosol | 81.98 | 81.47 |
Bra006578.1-P | Field mustard | cytosol | 80.99 | 81.39 |
CDX70945 | Canola | cytosol | 80.74 | 81.14 |
Solyc07g042550.2.1 | Tomato | extracellular | 78.52 | 79.01 |
PGSC0003DMT400035262 | Potato | cytosol | 78.64 | 78.84 |
PGSC0003DMT400007505 | Potato | cytosol | 78.27 | 78.76 |
Solyc12g009300.1.1 | Tomato | nucleus | 78.15 | 78.63 |
GSMUA_Achr7P19810_001 | Banana | mitochondrion | 77.16 | 76.59 |
KXG19528 | Sorghum | mitochondrion | 74.81 | 75.56 |
HORVU7Hr1G033230.2 | Barley | mitochondrion | 75.06 | 75.15 |
TraesCS7A01G158900.1 | Wheat | golgi, nucleus | 74.69 | 74.88 |
GSMUA_Achr6P10890_001 | Banana | unclear | 75.06 | 74.6 |
GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 74.94 | 74.39 |
Zm00001d047253_P003 | Maize | cytosol | 74.57 | 74.02 |
GSMUA_Achr2P21870_001 | Banana | cytosol | 74.32 | 73.86 |
OQU92441 | Sorghum | cytosol | 74.32 | 73.77 |
Os06t0194900-03 | Rice | extracellular | 73.58 | 73.76 |
GSMUA_Achr3P01900_001 | Banana | mitochondrion | 74.2 | 73.65 |
Zm00001d045042_P014 | Maize | cytosol, mitochondrion | 74.57 | 73.48 |
TraesCS7D01G036600.2 | Wheat | golgi | 73.83 | 73.37 |
TraesCS7A01G040900.2 | Wheat | cytosol | 73.83 | 73.37 |
TraesCS4A01G446700.1 | Wheat | cytosol | 73.83 | 73.37 |
HORVU7Hr1G007220.8 | Barley | cytosol | 73.83 | 73.37 |
Os07t0616800-01 | Rice | cytosol | 73.83 | 73.28 |
TraesCS7D01G159800.1 | Wheat | mitochondrion | 74.57 | 73.12 |
Os03t0401300-01 | Rice | extracellular | 73.58 | 73.04 |
TraesCS7B01G063400.1 | Wheat | mitochondrion | 74.44 | 73.0 |
HORVU2Hr1G030870.1 | Barley | plasma membrane | 72.72 | 72.18 |
TraesCS2B01G194200.1 | Wheat | golgi | 73.33 | 71.48 |
TraesCS2A01G168200.1 | Wheat | golgi, unclear | 73.33 | 71.48 |
TraesCS2D01G175600.1 | Wheat | golgi, unclear | 73.33 | 71.39 |
PGSC0003DMT400035264 | Potato | cytosol | 69.51 | 70.11 |
Solyc07g042520.2.1 | Tomato | cytosol, extracellular | 69.26 | 69.86 |
KRH68215 | Soybean | cytosol, endoplasmic reticulum, nucleus | 70.0 | 69.83 |
KRG96468 | Soybean | cytosol, endoplasmic reticulum, nucleus | 69.51 | 69.33 |
HORVU5Hr1G050660.1 | Barley | cytosol | 3.33 | 67.5 |
KRH12090 | Soybean | endoplasmic reticulum | 66.42 | 67.08 |
KRH72916 | Soybean | cytosol | 53.83 | 51.9 |
KRH17270 | Soybean | cytosol | 53.7 | 51.79 |
KRH30890 | Soybean | cytosol | 52.1 | 49.94 |
KRH09470 | Soybean | cytosol, plastid | 53.58 | 47.17 |
KRH38924 | Soybean | plastid | 53.33 | 46.91 |
KRH03629 | Soybean | endoplasmic reticulum | 21.36 | 16.34 |
KRH20178 | Soybean | nucleus | 21.23 | 16.24 |
KRH62455 | Soybean | cytosol | 15.19 | 15.83 |
KRH14493 | Soybean | cytosol | 20.74 | 15.8 |
KRH56446 | Soybean | cytosol | 20.12 | 15.72 |
KRG98934 | Soybean | cytosol | 20.12 | 15.48 |
KRH46034 | Soybean | cytosol | 20.12 | 15.45 |
Protein Annotations
KEGG:00500+2.4.1.13 | Gene3D:1.20.120.1230 | EntrezGene:100806761 | MapMan:3.1.4.2 | Gene3D:3.10.450.330 | Gene3D:3.40.50.2000 |
EMBL:ACUP02005469 | ncoils:Coil | EnsemblPlantsGene:GLYMA_09G073600 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 |
GO:GO:0005985 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016157 | GO:GO:0016740 |
GO:GO:0016757 | InterPro:Glyco_trans_1 | UniProt:I1L1U2 | EnsemblPlants:KRH37557 | ProteinID:KRH37557 | ProteinID:KRH37557.1 |
PFAM:PF00534 | PFAM:PF00862 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF391 | MetaCyc:PWY-3801 | SUPFAM:SSF53756 |
InterPro:Sucrose_synth | InterPro:Sucrose_synthase_pln/cyn | TIGRFAMs:TIGR02470 | UniParc:UPI00023CA053 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:-:7809701..7815908
Molecular Weight (calculated)
93663.5 Da
IEP (calculated)
6.432
GRAVY (calculated)
-0.305
Length
810 amino acids
Sequence
(BLAST)
(BLAST)
001: MANHPLTHSH SFRERFDETL TGHRNEILAL LSRLEAKGKG ILQHHQVVAE FEEIPEESRK KLQDGVFGEV LRSTQEAIVL PPFVALAVRP RPGVWEYLRV
101: NVHMLVVDEL RPAEYLRFKE ELVEGSSNGN FVLELDFEPF NASFPRPTLN KSIGNGVEFL NRHLSAKLFH DKESMQPLLE FLRLHSYKGK TMMLNDKVQS
201: LDSLQHVLRK AEEYLISVAP ETPYSEFENR FREIGLERGW GDTAERVLEM IQLLLDLLEA PDPCTLETFL GRVPMVFNVV ILSPHGYFAQ DNVLGYPDTG
301: GQVVYILDQV RALENEMLNR IKKQGLDITP RILIITRLLP DAVGTTCGQR LERVYDTEYC DILRVPFRTE KGIVRKWISR FEVWPYLETY TEDVALELAK
401: ELQAKPDLIV GNYSDGNIVA SLLAHKLGVT QCTIAHALEK TKYPESDIYW KKFEEKYHFS CQFTADLFAM NHTDFIITST FQEIAGSKDT VGQYESHTAF
501: TLPGLYRVVH GIDPFDPKFN IVSPGADMGI YFPYTETERR LTEFHSDIEE LLYSSVENEE HICVLKDRNK PIIFTMARLD RVKNITGLVE WYGKNARLRE
601: LVNLVVVAGD RRKESKDLEE KAEMKKMYGL IETYKLNGQF RWISSQMNRV RNGELYRVIC DTRGAFVQPA VYEAFGLTVV EAMTCGLPTF ATCNGGPAEI
701: IVHGKSGYHI DPYHGDHAAE ILVEFFEKSK ADPSHWDKIS QGGLKRIHEK YTWQIYSDRL LTLTGVYGFW KHVTNLERRE SKRYLEMFYA LKYRKLVYFF
801: HYYTIQWLHL
101: NVHMLVVDEL RPAEYLRFKE ELVEGSSNGN FVLELDFEPF NASFPRPTLN KSIGNGVEFL NRHLSAKLFH DKESMQPLLE FLRLHSYKGK TMMLNDKVQS
201: LDSLQHVLRK AEEYLISVAP ETPYSEFENR FREIGLERGW GDTAERVLEM IQLLLDLLEA PDPCTLETFL GRVPMVFNVV ILSPHGYFAQ DNVLGYPDTG
301: GQVVYILDQV RALENEMLNR IKKQGLDITP RILIITRLLP DAVGTTCGQR LERVYDTEYC DILRVPFRTE KGIVRKWISR FEVWPYLETY TEDVALELAK
401: ELQAKPDLIV GNYSDGNIVA SLLAHKLGVT QCTIAHALEK TKYPESDIYW KKFEEKYHFS CQFTADLFAM NHTDFIITST FQEIAGSKDT VGQYESHTAF
501: TLPGLYRVVH GIDPFDPKFN IVSPGADMGI YFPYTETERR LTEFHSDIEE LLYSSVENEE HICVLKDRNK PIIFTMARLD RVKNITGLVE WYGKNARLRE
601: LVNLVVVAGD RRKESKDLEE KAEMKKMYGL IETYKLNGQF RWISSQMNRV RNGELYRVIC DTRGAFVQPA VYEAFGLTVV EAMTCGLPTF ATCNGGPAEI
701: IVHGKSGYHI DPYHGDHAAE ILVEFFEKSK ADPSHWDKIS QGGLKRIHEK YTWQIYSDRL LTLTGVYGFW KHVTNLERRE SKRYLEMFYA LKYRKLVYFF
801: HYYTIQWLHL
001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE
Arabidopsis Description
SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.