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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 4
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
endoplasmic reticulum: 23041469
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
msms PMID: 23041469 doi
S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH12615 Soybean endoplasmic reticulum 97.41 97.89
KRH19379 Soybean cytosol 88.52 89.07
KRH02557 Soybean cytosol, endoplasmic reticulum, extracellular, mitochondrion 87.65 88.2
CDX88838 Canola endoplasmic reticulum, golgi 75.8 82.64
HORVU0Hr1G019020.1 Barley cytosol 15.19 82.55
AT3G43190.1 Thale cress cytosol 82.35 82.55
CDX92432 Canola cytosol 81.85 82.36
Bra002332.1-P Field mustard cytosol 79.88 82.32
CDY16569 Canola cytosol 81.48 81.99
AT5G20830.1 Thale cress cytosol 81.73 81.93
VIT_11s0016g00470.t01 Wine grape cytosol 81.98 81.47
Bra006578.1-P Field mustard cytosol 80.99 81.39
CDX70945 Canola cytosol 80.74 81.14
Solyc07g042550.2.1 Tomato extracellular 78.52 79.01
PGSC0003DMT400035262 Potato cytosol 78.64 78.84
PGSC0003DMT400007505 Potato cytosol 78.27 78.76
Solyc12g009300.1.1 Tomato nucleus 78.15 78.63
GSMUA_Achr7P19810_001 Banana mitochondrion 77.16 76.59
KXG19528 Sorghum mitochondrion 74.81 75.56
HORVU7Hr1G033230.2 Barley mitochondrion 75.06 75.15
TraesCS7A01G158900.1 Wheat golgi, nucleus 74.69 74.88
GSMUA_Achr6P10890_001 Banana unclear 75.06 74.6
GSMUA_Achr10P... Banana cytosol, mitochondrion 74.94 74.39
Zm00001d047253_P003 Maize cytosol 74.57 74.02
GSMUA_Achr2P21870_001 Banana cytosol 74.32 73.86
OQU92441 Sorghum cytosol 74.32 73.77
Os06t0194900-03 Rice extracellular 73.58 73.76
GSMUA_Achr3P01900_001 Banana mitochondrion 74.2 73.65
Zm00001d045042_P014 Maize cytosol, mitochondrion 74.57 73.48
TraesCS7D01G036600.2 Wheat golgi 73.83 73.37
TraesCS7A01G040900.2 Wheat cytosol 73.83 73.37
TraesCS4A01G446700.1 Wheat cytosol 73.83 73.37
HORVU7Hr1G007220.8 Barley cytosol 73.83 73.37
Os07t0616800-01 Rice cytosol 73.83 73.28
TraesCS7D01G159800.1 Wheat mitochondrion 74.57 73.12
Os03t0401300-01 Rice extracellular 73.58 73.04
TraesCS7B01G063400.1 Wheat mitochondrion 74.44 73.0
HORVU2Hr1G030870.1 Barley plasma membrane 72.72 72.18
TraesCS2B01G194200.1 Wheat golgi 73.33 71.48
TraesCS2A01G168200.1 Wheat golgi, unclear 73.33 71.48
TraesCS2D01G175600.1 Wheat golgi, unclear 73.33 71.39
PGSC0003DMT400035264 Potato cytosol 69.51 70.11
Solyc07g042520.2.1 Tomato cytosol, extracellular 69.26 69.86
KRH68215 Soybean cytosol, endoplasmic reticulum, nucleus 70.0 69.83
KRG96468 Soybean cytosol, endoplasmic reticulum, nucleus 69.51 69.33
HORVU5Hr1G050660.1 Barley cytosol 3.33 67.5
KRH12090 Soybean endoplasmic reticulum 66.42 67.08
KRH72916 Soybean cytosol 53.83 51.9
KRH17270 Soybean cytosol 53.7 51.79
KRH30890 Soybean cytosol 52.1 49.94
KRH09470 Soybean cytosol, plastid 53.58 47.17
KRH38924 Soybean plastid 53.33 46.91
KRH03629 Soybean endoplasmic reticulum 21.36 16.34
KRH20178 Soybean nucleus 21.23 16.24
KRH62455 Soybean cytosol 15.19 15.83
KRH14493 Soybean cytosol 20.74 15.8
KRH56446 Soybean cytosol 20.12 15.72
KRG98934 Soybean cytosol 20.12 15.48
KRH46034 Soybean cytosol 20.12 15.45
Protein Annotations
KEGG:00500+2.4.1.13Gene3D:1.20.120.1230EntrezGene:100806761MapMan:3.1.4.2Gene3D:3.10.450.330Gene3D:3.40.50.2000
EMBL:ACUP02005469ncoils:CoilEnsemblPlantsGene:GLYMA_09G073600GO:GO:0003674GO:GO:0003824GO:GO:0005975
GO:GO:0005985GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016157GO:GO:0016740
GO:GO:0016757InterPro:Glyco_trans_1UniProt:I1L1U2EnsemblPlants:KRH37557ProteinID:KRH37557ProteinID:KRH37557.1
PFAM:PF00534PFAM:PF00862PANTHER:PTHR12526PANTHER:PTHR12526:SF391MetaCyc:PWY-3801SUPFAM:SSF53756
InterPro:Sucrose_synthInterPro:Sucrose_synthase_pln/cynTIGRFAMs:TIGR02470UniParc:UPI00023CA053SEG:seg:
Description
hypothetical protein
Coordinates
chr9:-:7809701..7815908
Molecular Weight (calculated)
93663.5 Da
IEP (calculated)
6.432
GRAVY (calculated)
-0.305
Length
810 amino acids
Sequence
(BLAST)
001: MANHPLTHSH SFRERFDETL TGHRNEILAL LSRLEAKGKG ILQHHQVVAE FEEIPEESRK KLQDGVFGEV LRSTQEAIVL PPFVALAVRP RPGVWEYLRV
101: NVHMLVVDEL RPAEYLRFKE ELVEGSSNGN FVLELDFEPF NASFPRPTLN KSIGNGVEFL NRHLSAKLFH DKESMQPLLE FLRLHSYKGK TMMLNDKVQS
201: LDSLQHVLRK AEEYLISVAP ETPYSEFENR FREIGLERGW GDTAERVLEM IQLLLDLLEA PDPCTLETFL GRVPMVFNVV ILSPHGYFAQ DNVLGYPDTG
301: GQVVYILDQV RALENEMLNR IKKQGLDITP RILIITRLLP DAVGTTCGQR LERVYDTEYC DILRVPFRTE KGIVRKWISR FEVWPYLETY TEDVALELAK
401: ELQAKPDLIV GNYSDGNIVA SLLAHKLGVT QCTIAHALEK TKYPESDIYW KKFEEKYHFS CQFTADLFAM NHTDFIITST FQEIAGSKDT VGQYESHTAF
501: TLPGLYRVVH GIDPFDPKFN IVSPGADMGI YFPYTETERR LTEFHSDIEE LLYSSVENEE HICVLKDRNK PIIFTMARLD RVKNITGLVE WYGKNARLRE
601: LVNLVVVAGD RRKESKDLEE KAEMKKMYGL IETYKLNGQF RWISSQMNRV RNGELYRVIC DTRGAFVQPA VYEAFGLTVV EAMTCGLPTF ATCNGGPAEI
701: IVHGKSGYHI DPYHGDHAAE ILVEFFEKSK ADPSHWDKIS QGGLKRIHEK YTWQIYSDRL LTLTGVYGFW KHVTNLERRE SKRYLEMFYA LKYRKLVYFF
801: HYYTIQWLHL
Best Arabidopsis Sequence Match ( AT3G43190.1 )
(BLAST)
001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE
Arabidopsis Description
SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.