Factsheet for PGSC0003DMT400035264

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g042520.2.1	Tomato	cytosol, extracellular	98.38	98.38
HORVU0Hr1G019020.1	Barley	cytosol	15.57	83.89
CDX88838	Canola	endoplasmic reticulum, golgi	68.0	73.49
PGSC0003DMT400007505	Potato	cytosol	72.48	72.3
PGSC0003DMT400035262	Potato	cytosol	72.1	71.66
Bra002332.1-P	Field mustard	cytosol	70.11	71.63
KRH19379	Soybean	cytosol	71.36	71.18
KRH12615	Soybean	endoplasmic reticulum	71.23	70.97
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	70.86	70.68
CDY16569	Canola	cytosol	70.73	70.56
CDX92432	Canola	cytosol	70.49	70.31
Bra006578.1-P	Field mustard	cytosol	70.11	69.85
AT5G20830.1	Thale cress	cytosol	70.24	69.8
VIT_11s0016g00470.t01	Wine grape	cytosol	70.73	69.69
KRH37557	Soybean	endoplasmic reticulum	70.11	69.51
CDX70945	Canola	cytosol	69.74	69.48
AT3G43190.1	Thale cress	cytosol	69.61	69.18
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	68.37	67.28
GSMUA_Achr6P10890_001	Banana	unclear	68.12	67.12
GSMUA_Achr3P01900_001	Banana	mitochondrion	68.0	66.91
GSMUA_Achr7P19810_001	Banana	mitochondrion	67.62	66.54
GSMUA_Achr2P21870_001	Banana	cytosol	67.25	66.26
KXG19528	Sorghum	mitochondrion	66.13	66.21
Os07t0616800-01	Rice	cytosol	67.0	65.93
OQU92441	Sorghum	cytosol	66.75	65.69
Os03t0401300-01	Rice	extracellular	66.75	65.69
HORVU7Hr1G033230.2	Barley	mitochondrion	66.0	65.51
TraesCS7A01G158900.1	Wheat	golgi, nucleus	65.88	65.47
Zm00001d047253_P003	Maize	cytosol	66.5	65.44
HORVU7Hr1G007220.8	Barley	cytosol	66.13	65.15
TraesCS7D01G036600.2	Wheat	golgi	66.0	65.03
TraesCS7A01G040900.2	Wheat	cytosol	66.0	65.03
TraesCS4A01G446700.1	Wheat	cytosol	66.0	65.03
Os06t0194900-03	Rice	extracellular	65.26	64.85
Zm00001d045042_P014	Maize	cytosol, mitochondrion	65.88	64.36
HORVU2Hr1G030870.1	Barley	plasma membrane	65.26	64.22
PGSC0003DMT400079728	Potato	cytosol	14.07	64.2
TraesCS7D01G159800.1	Wheat	mitochondrion	65.26	63.44
TraesCS7B01G063400.1	Wheat	mitochondrion	65.26	63.44
TraesCS2B01G194200.1	Wheat	golgi	65.63	63.42
TraesCS2A01G168200.1	Wheat	golgi, unclear	65.63	63.42
TraesCS2D01G175600.1	Wheat	golgi, unclear	65.63	63.34
PGSC0003DMT400017087	Potato	cytosol	62.39	61.78
HORVU5Hr1G050660.1	Barley	cytosol	2.74	55.0
PGSC0003DMT400043117	Potato	cytosol	53.67	51.31
PGSC0003DMT400049042	Potato	cytosol	3.24	18.18
PGSC0003DMT400071807	Potato	cytosol	19.18	14.61
PGSC0003DMT400067951	Potato	nucleus	19.05	14.38
PGSC0003DMT400049047	Potato	golgi, mitochondrion, plastid	8.59	12.39
PGSC0003DMT400076855	Potato	cytosol, peroxisome, plastid	6.35	9.77

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	EntrezGene:102586510	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_1	UniProt:M1B219
PFAM:PF00534	PFAM:PF00862	EnsemblPlantsGene:PGSC0003DMG400013547	PGSC:PGSC0003DMG400013547	EnsemblPlants:PGSC0003DMT400035264	PANTHER:PTHR12526
PANTHER:PTHR12526:SF391	SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI00029554B3
RefSeq:XP_006353767.1	SEG:seg	:	:	:	:

Description

Sucrose sythase [Source:PGSC_GENE;Acc:PGSC0003DMG400013547]

Coordinates

chr7:-:40610342..40613974

Molecular Weight (calculated)

91444.9 Da

IEP (calculated)

6.172

GRAVY (calculated)

-0.287

Length

803 amino acids

Sequence
(BLAST)

001: MAASGLSIKE RLEEAILSRP DEISALKSRI ESEGKGVMKP LDLLNHLISV NSKKNGVNVG NSALVEVLSC SQEAIIVPPQ LALAVRPRPG VWEYLSLNLK
101: QQKVAELTIP EYLQLKEDVV DESGNILEMD FEPFTTVTPT KTLSDSIGNG LEFLNRHIAS TMFHDKEIAK CLLDFLRQHN YKGKSLMVKE SIQSLESFQF
201: VLKKAEEYLC TLSSETPYSN FESKFEEIGL ERGWGNTAER VQETISHLLH LLEAPNASSL ENFLGRIPLV FNVVILTPHG YFAQENVLGY PDTGGQVVYI
301: LDQVPAMETE MLLRLKLQGL DDIIPRILVV TRLLPDAVGT TCGERMEKVY GAEHSHIIRV PFRTEKGMLR KWISRFEVWP YMETFTEDVA EELVKELQAK
401: PDLIIGNYSE GNLAASLLAK KFGATQCTIA HALEKTKYPN SDLYWKKFDD KYHFSSQFTA DLYAMNHTDF IITSTFQEIA GSKNTVGQYE SHTAFTMPGL
501: YRVVHGIDSF DPKFNIVSPG ADMSIYFPYT EKEKRLTKFH PEIEELLYSP VENKEHLCVL KDRNKPILFT MARLDRVKNL TGLVEWYAKN ARLRELANLV
601: VVGGDRRKES KDLEEQAEMK KMYDLIETYN LNGQFRWISS QMNRVRNGEL YRYIADTRGA FVQPAFYEAF GLTVVESMTC GLPTFATCNG GPFEIIVHGK
701: SGFHIDPNQG DKATDLLVKF FEKSKEDPSY WDNISKGGLQ RIIEKYTWQI YSQKVMTLSG IYGFWKFATK NDKVASAKKR YLEMFYELMF KKSAEKVPLA
801: IDE

Best Arabidopsis Sequence Match ( AT3G43190.1 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.