Factsheet for GSMUA_Achr10P18660_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P10890_001	Banana	unclear	96.2	96.32
GSMUA_Achr3P01900_001	Banana	mitochondrion	94.85	94.85
GSMUA_Achr2P21870_001	Banana	cytosol	94.61	94.72
HORVU5Hr1G050660.1	Barley	cytosol	4.17	85.0
HORVU0Hr1G019020.1	Barley	cytosol	15.44	84.56
OQU92441	Sorghum	cytosol	84.07	84.07
Zm00001d047253_P003	Maize	cytosol	83.95	83.95
Os03t0401300-01	Rice	extracellular	83.7	83.7
Os07t0616800-01	Rice	cytosol	83.33	83.33
HORVU2Hr1G030870.1	Barley	plasma membrane	82.72	82.72
GSMUA_Achr7P19810_001	Banana	mitochondrion	82.48	82.48
HORVU7Hr1G033230.2	Barley	mitochondrion	81.62	82.32
TraesCS7D01G036600.2	Wheat	golgi	82.11	82.21
HORVU7Hr1G007220.8	Barley	cytosol	82.11	82.21
TraesCS7A01G158900.1	Wheat	golgi, nucleus	81.37	82.18
TraesCS7A01G040900.2	Wheat	cytosol	81.99	82.09
TraesCS4A01G446700.1	Wheat	cytosol	81.99	82.09
KXG19528	Sorghum	mitochondrion	80.64	82.04
TraesCS2A01G168200.1	Wheat	golgi, unclear	83.33	81.83
TraesCS2D01G175600.1	Wheat	golgi, unclear	83.33	81.73
TraesCS2B01G194200.1	Wheat	golgi	82.97	81.47
Os06t0194900-03	Rice	extracellular	80.51	81.31
Zm00001d045042_P014	Maize	cytosol, mitochondrion	80.51	79.93
TraesCS7B01G063400.1	Wheat	mitochondrion	80.64	79.66
TraesCS7D01G159800.1	Wheat	mitochondrion	80.51	79.54
KRH19379	Soybean	cytosol	75.61	76.65
VIT_11s0016g00470.t01	Wine grape	cytosol	76.23	76.32
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	75.25	76.27
KRH12615	Soybean	endoplasmic reticulum	75.0	75.93
Solyc07g042550.2.1	Tomato	extracellular	74.02	75.03
PGSC0003DMT400007505	Potato	cytosol	74.02	75.03
CDX88838	Canola	endoplasmic reticulum, golgi	68.26	74.97
KRH37557	Soybean	endoplasmic reticulum	74.39	74.94
Solyc12g009300.1.1	Tomato	nucleus	73.77	74.78
AT3G43190.1	Thale cress	cytosol	73.28	74.01
PGSC0003DMT400035262	Potato	cytosol	73.16	73.89
Bra002332.1-P	Field mustard	cytosol	71.08	73.79
CDX92432	Canola	cytosol	72.3	73.29
CDY16569	Canola	cytosol	72.3	73.29
GSMUA_Achr3P08200_001	Banana	mitochondrion	16.18	72.93
Bra006578.1-P	Field mustard	cytosol	71.81	72.7
AT5G20830.1	Thale cress	cytosol	71.94	72.65
CDX70945	Canola	cytosol	71.57	72.46
GSMUA_Achr8P22470_001	Banana	cytosol	71.45	72.06
GSMUA_Achr3P08190_001	Banana	cytosol	53.68	70.19
PGSC0003DMT400035264	Potato	cytosol	67.28	68.37
Solyc07g042520.2.1	Tomato	cytosol, extracellular	67.03	68.12
GSMUA_Achr3P13980_001	Banana	cytosol	56.13	54.27
GSMUA_Achr9P21240_001	Banana	cytosol	55.88	54.03
GSMUA_Achr6P17480_001	Banana	nucleus	19.85	15.53
GSMUA_Achr4P06050_001	Banana	cytosol	20.1	15.49
GSMUA_Achr4P16070_001	Banana	nucleus	20.34	15.34
GSMUA_Achr9P22510_001	Banana	cytosol	19.85	15.27

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	EnsemblPlantsGene:GSMUA_Achr10G18660_001	EnsemblPlants:GSMUA_Achr10P18660_001	EnsemblPlants:GSMUA_Achr10T18660_001
InterPro:Glyco_trans_1	UniProt:M0RJE1	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF398
SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI00029562D7	:

Description

Sucrose synthase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G18660_001]

Coordinates

chr10:+:25291305..25295732

Molecular Weight (calculated)

93007.3 Da

IEP (calculated)

6.265

GRAVY (calculated)

-0.273

Length

816 amino acids

Sequence
(BLAST)

001: MSQRTLTRAH SFRERIGDSL SSHPNELVAL FSRFIQQGKG MLQPHQLLAE YAAVFSEADK EKLKDGAFED VIKAAQEAIV IPPRVALAIR PRPGVWEYVR
101: VNISELAVEE LTVPEYLQFK EELVDESTQN NNFVLELDFE PFNASFPRPS LSKSIGNGVQ FLNRHLSSKL FHDKESMYPL LNFLRKHNYK GMSMMLNDRI
201: QSLSALQAAL RKAEQHLLSI ASDTPYSEFN HRFQELGLEK GWGDTAQRVY ENIHLLLDLL EAPDPCTLEN FLGIIPMMFN VVILSPHGYF AQANVLGYPD
301: TGGQVVYILD QVRALENEML LRIKRQGLDI TPRILIVSRL LPDAVGTTCG QRLEKVLGTE HTHILRVPFR TENGIIRKWI SRFEVWPYLE TYTEDVANEL
401: AGELQATPDL IIGNYSDGNL VSTLLAHKLG VTQCTIAHAL EKTKYPNSDI YWKKFENQYH FSCQFTADLV AMNHADFIIT STFQEIAGSK DTVGQYESHT
501: AFTLPGLYRV VHGIDVFDPK FNIVSPGADL SIYFPYTEKH KRLTSLHPEI EELLFNPEDN TEHKGVLNDT KKPIIFSMAR LDRVKNLTGL VEFYGRNERL
601: KELVNLVVVC GDHGKESKDL EEQAEFKKMY SFIEKYNLHG HIRWISAQMN RVRNGELYRY IADTKGAFVQ PAFYEAFGLT VVESMTCGLP TFATVHGGPG
701: EIIVDGVSGF HIDPYQGDKA AEIIVNFFEK CKEDPTCWDK ISQGGLKRIE EKYTWKLYSE RLMTLSGVYG FWKYVSNLDR RETRRYLEMF YALKYRNLAE
801: SVPLAVDGEA AVNGAK

Best Arabidopsis Sequence Match ( AT3G43190.2 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.