Factsheet for Os06t0194900-03

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

extracellular: 26072143

msms PMID: 26072143 doi

B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19528	Sorghum	mitochondrion	93.94	94.64
HORVU7Hr1G033230.2	Barley	mitochondrion	93.56	93.45
TraesCS7A01G158900.1	Wheat	golgi, nucleus	93.07	93.07
Zm00001d045042_P014	Maize	cytosol, mitochondrion	93.81	92.21
TraesCS7B01G063400.1	Wheat	mitochondrion	92.45	90.44
TraesCS7D01G159800.1	Wheat	mitochondrion	92.33	90.31
GSMUA_Achr7P19810_001	Banana	mitochondrion	82.18	81.37
GSMUA_Achr2P21870_001	Banana	cytosol	81.56	80.86
GSMUA_Achr6P10890_001	Banana	unclear	81.44	80.74
GSMUA_Achr3P01900_001	Banana	mitochondrion	81.44	80.64
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	81.31	80.51
Os03t0401300-01	Rice	extracellular	80.82	80.02
Os07t0616800-01	Rice	cytosol	79.83	79.04
KRH19379	Soybean	cytosol	75.5	75.78
KRH02557	Soybean	cytosol, endoplasmic reticulum, extracellular, mitochondrion	75.25	75.53
CDX88838	Canola	endoplasmic reticulum, golgi	69.18	75.24
KRH12615	Soybean	endoplasmic reticulum	74.38	74.57
PGSC0003DMT400007505	Potato	cytosol	74.13	74.41
AT3G43190.1	Thale cress	cytosol	74.38	74.38
VIT_11s0016g00470.t01	Wine grape	cytosol	75.0	74.36
Solyc12g009300.1.1	Tomato	nucleus	73.64	73.91
Bra002332.1-P	Field mustard	cytosol	71.66	73.66
KRH37557	Soybean	endoplasmic reticulum	73.76	73.58
Bra006578.1-P	Field mustard	cytosol	72.9	73.08
CDX92432	Canola	cytosol	72.77	73.04
Solyc07g042550.2.1	Tomato	extracellular	72.77	73.04
AT5G20830.1	Thale cress	cytosol	73.02	73.02
CDY16569	Canola	cytosol	72.65	72.92
CDX70945	Canola	cytosol	72.65	72.83
PGSC0003DMT400035262	Potato	cytosol	72.28	72.28
Os03t0340500-01	Rice	cytosol, plasma membrane, plastid	70.05	69.96
PGSC0003DMT400035264	Potato	cytosol	64.85	65.26
Solyc07g042520.2.1	Tomato	cytosol, extracellular	64.48	64.88
Os02t0831500-01	Rice	plastid	54.7	52.25
Os04t0249500-00	Rice	cytosol	54.46	52.13
Os04t0309600-01	Rice	cytosol, plasma membrane	54.33	52.01
Os08t0301500-01	Rice	plasma membrane	22.15	16.79
Os01t0919400-01	Rice	plasma membrane	22.03	16.42
Os02t0184400-01	Rice	endoplasmic reticulum, golgi	19.8	15.83
Os11t0236100-01	Rice	cytosol, plasma membrane	6.56	10.41
Os06t0643800-01	Rice	plasma membrane	0.5	2.17

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	EntrezGene:4340386
ProteinID:AAL31375.1	EMBL:AK100546	ProteinID:BAD35646.1	ProteinID:BAF18961.1	ProteinID:BAS96603.1	ProteinID:CAA46017.1
EMBL:EF122480	EMBL:EF122481	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0005985	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009791	GO:GO:0009987
GO:GO:0010431	GO:GO:0016043	GO:GO:0016157	GO:GO:0016740	GO:GO:0016757	GO:GO:0051262
InterPro:Glyco_trans_1	EMBL:HQ895720	UniProt:I3QD82	EMBL:JF969237	EnsemblPlantsGene:Os06g0194900	EnsemblPlants:Os06t0194900-03
UniProt:P30298	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF369	SUPFAM:SSF53756
InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI0000000D8C	RefSeq:XP_015643025.1	RefSeq:XP_015643026.1
RefSeq:XP_015643027.1	EMBL:Z15028	SEG:seg	:	:	:

Description

SUCROSE SYNTHASE 2Sucrose synthase 2 (EC 2.4.1.13). (Os06t0194900-01);Sucrose synthase 2 (EC 2.4.1.13). (Os06t0194900-02);Sucrose synthase 2 (EC 2.4.1.13). (Os06t0194900-03);Similar to Sucrose synthase 2. (Os06t0194900-04)

Coordinates

chr6:-:4796714..4802437

Molecular Weight (calculated)

92134.7 Da

IEP (calculated)

6.353

GRAVY (calculated)

-0.235

Length

808 amino acids

Sequence
(BLAST)

001: MAAKLARLHS LRERLGATFS SHPNELIALF SRYVNQGKGM LQRHQLLAEF DALIEADKEK YAPFEDILRA AQEAIVLPPW VALAIRPRPG VWDYIRVNVS
101: ELAVEELSVS EYLAFKEQLV DGHTNSNFVL ELDFEPFNAS FPRPSMSKSI GNGVQFLNRH LSSKLFQDKE SLYPLLNFLK AHNHKGTTMM LNDRIQSLRG
201: LQSSLRKAEE YLMGIPQDTP YSEFNHRFQE LGLEKGWGDC AKRVLDTIHL LLDLLEAPDP ANLEKFLGTI PMMFNVVILS PHGYFAQSNV LGYPDTGGQV
301: VYILDQVRAL ENEMLLRIKQ QGLDITPKIL IVTRLLPDAV GTTCGQRVEK VIGTEHTDIL RVPFRSENGI LRKWISRFDV WPFLETYTED VANEIMREMQ
401: AKPDLIIGNY SDGNLVATLL AHKLGVTQCT IAHALEKTKY PNSDIYLDKF DSQYHFSCQF TADLIAMNHT DFIITSTFQE IAGSKDTVGQ YESHIAFTLP
501: GLYRVVHGID VFDPKFNIVS PGADMSVYFP YTEADKRLTA FHPEIEELLY SEVENDEHKF VLKDKNKPII FSMARLDRVK NMTGLVEMYG KNAHLRDLAN
601: LVIVCGDHGN QSKDREEQAE FKKMYGLIDQ YKLKGHIRWI SAQMNRVRNG ELYRYICDTK GVFVQPAFYE AFGLTVIEAM TCGLPTIATC HGGPAEIIVD
701: GVSGLHIDPY HSDKAADILV NFFEKCKQDS TYWDNISQGG LQRIYEKYTW KLYSERLMTL TGVYGFWKYV SNLERRETRR YIEMFYALKY RSLASAVPLA
801: VDGESTSK

Best Arabidopsis Sequence Match ( AT3G43190.2 )
(BLAST)

001: MANAERVITR VHSQRERLDA TLVAQKNEVF ALLSRVEAKG KGILQHHQII AEFEAMPLET QKKLKGGAFF EFLRSAQEAI VLPPFVALAV RPRPGVWEYV
101: RVNLHDLVVE ELQASEYLQF KEELVDGIKN GNFTLELDFE PFNAAFPRPT LNKYIGDGVE FLNRHLSAKL FHDKESLHPL LKFLRLHSHE GKTLMLNNRI
201: QNLNTLQHNL RKAEEYLMEL KPETLYSEFE HKFQEIGLER GWGDTAERVL NMIRLLLDLL EAPDPCTLEN FLGRIPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALETEML QRIKQQGLNI TPRILIITRL LPDAAGTTCG QRLEKVYGSQ YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TFTEDVAAEI
401: SKELQGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDEKYH FSCQFTADLI AMNHTDFIIT STFQEIAGSK DTVGQYESHR
501: SFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFAYTEEK RRLTAFHLEI EELLYSDVEN EEHLCVLKDK KKPIIFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELVNLVVVG GDRRKESQDN EEKAEMKKMY ELIEEYKLNG QFRWISSQMN RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCNGGPA
701: EIIVHGKSGF HIDPYHGDKA AESLADFFTK CKHDPSHWDQ ISLGGLERIQ EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LESRRYLEMF YALKYRPLAQ
801: AVPLAHEE

Arabidopsis Description

SUS4Sucrose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.