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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002332.1-P Field mustard cytosol 96.65 98.98
CDY16569 Canola cytosol 98.88 98.88
CDX70945 Canola cytosol 96.65 96.53
CDX88838 Canola endoplasmic reticulum, golgi 88.32 95.69
AT5G20830.1 Thale cress cytosol 93.29 92.95
KRH19379 Soybean cytosol 84.35 84.35
KRH02557 Soybean cytosol, endoplasmic reticulum, extracellular, mitochondrion 83.98 83.98
KRH12615 Soybean endoplasmic reticulum 83.35 83.25
HORVU0Hr1G019020.1 Barley cytosol 15.28 82.55
KRH37557 Soybean endoplasmic reticulum 82.36 81.85
VIT_11s0016g00470.t01 Wine grape cytosol 80.75 79.75
PGSC0003DMT400007505 Potato cytosol 78.63 78.63
Solyc12g009300.1.1 Tomato nucleus 78.26 78.26
Solyc07g042550.2.1 Tomato extracellular 77.76 77.76
PGSC0003DMT400035262 Potato cytosol 77.27 76.98
GSMUA_Achr7P19810_001 Banana mitochondrion 74.66 73.65
KXG19528 Sorghum mitochondrion 72.92 73.19
GSMUA_Achr6P10890_001 Banana unclear 73.91 73.01
GSMUA_Achr2P21870_001 Banana cytosol 73.79 72.88
Os06t0194900-03 Rice extracellular 73.04 72.77
TraesCS7A01G158900.1 Wheat golgi, nucleus 72.92 72.65
HORVU7Hr1G033230.2 Barley mitochondrion 72.92 72.56
GSMUA_Achr10P... Banana cytosol, mitochondrion 73.29 72.3
GSMUA_Achr3P01900_001 Banana mitochondrion 73.17 72.18
Zm00001d047253_P003 Maize cytosol 73.04 72.06
OQU92441 Sorghum cytosol 73.04 72.06
HORVU7Hr1G007220.8 Barley cytosol 72.92 72.02
TraesCS4A01G446700.1 Wheat cytosol 72.67 71.78
TraesCS7A01G040900.2 Wheat cytosol 72.67 71.78
TraesCS7D01G036600.2 Wheat golgi 72.55 71.66
Zm00001d045042_P014 Maize cytosol, mitochondrion 73.17 71.65
Os03t0401300-01 Rice extracellular 72.55 71.57
Os07t0616800-01 Rice cytosol 72.55 71.57
HORVU2Hr1G030870.1 Barley plasma membrane 72.42 71.45
Solyc07g042520.2.1 Tomato cytosol, extracellular 70.68 70.86
TraesCS7B01G063400.1 Wheat mitochondrion 72.55 70.7
TraesCS2A01G168200.1 Wheat golgi, unclear 72.92 70.64
TraesCS2B01G194200.1 Wheat golgi 72.92 70.64
TraesCS7D01G159800.1 Wheat mitochondrion 72.42 70.58
PGSC0003DMT400035264 Potato cytosol 70.31 70.49
TraesCS2D01G175600.1 Wheat golgi, unclear 72.8 70.43
CDY22042 Canola cytosol, mitochondrion 67.45 66.95
CDY52781 Canola mitochondrion 67.33 66.83
CDX85398 Canola cytosol 66.21 66.05
CDX86250 Canola cytosol 64.35 65.74
HORVU5Hr1G050660.1 Barley cytosol 3.23 65.0
CDY38565 Canola cytosol 53.29 50.71
CDY26996 Canola cytosol 53.17 50.59
CDY71780 Canola cytosol, extracellular 21.49 48.6
CDX72985 Canola cytosol 55.65 47.97
CDX96472 Canola cytosol 55.4 47.7
CDY11107 Canola cytosol 54.66 46.81
CDX68228 Canola cytosol 54.53 46.7
CDX87785 Canola cytosol 9.32 46.58
CDY46981 Canola cytosol, nucleus, plastid 15.03 35.28
CDX73329 Canola cytosol 2.24 23.68
CDX94270 Canola nucleus 10.93 18.6
CDX70382 Canola cytosol 19.88 16.63
CDX88168 Canola nucleus 19.5 16.35
CDY35815 Canola cytosol 19.5 16.25
CDX80498 Canola cytosol 19.5 16.24
CDX92473 Canola cytosol 19.38 16.15
CDY45096 Canola cytosol 19.13 15.84
CDX89776 Canola cytosol 20.75 15.7
CDX78411 Canola cytosol 20.25 15.69
CDY18270 Canola cytosol 20.75 15.68
CDY41124 Canola cytosol 19.5 15.0
CDY69825 Canola cytosol 0.62 2.87
Protein Annotations
KEGG:00500+2.4.1.13Gene3D:1.20.120.1230MapMan:3.1.4.2Gene3D:3.10.450.330Gene3D:3.40.50.2000GO:A0A078DU40
EnsemblPlants:CDX92432ProteinID:CDX92432ProteinID:CDX92432.1GO:GO:0003674GO:GO:0003824GO:GO:0005975
GO:GO:0005985GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016157GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00154198001InterPro:Glyco_trans_1PFAM:PF00534PFAM:PF00862PANTHER:PTHR12526PANTHER:PTHR12526:SF391
MetaCyc:PWY-3801SUPFAM:SSF53756InterPro:Sucrose_synthInterPro:Sucrose_synthase_pln/cynTIGRFAMs:TIGR02470UniParc:UPI0004EEE004
SEG:seg:::::
Description
BnaA10g14710D
Coordinates
chrLK031872:+:636527..640302
Molecular Weight (calculated)
92212.9 Da
IEP (calculated)
6.073
GRAVY (calculated)
-0.299
Length
805 amino acids
Sequence
(BLAST)
001: MVNGVLTRVH SQRERLSETL VAQRNEVLAL LSRVEAKGKG ILQQNQIVAE FEALPEETQK KIEGGAFFDL LKTTQEAIVL PPWVALAVRP RPGVWEYIRV
101: NLHALVVEEL TPAEFLHFKE ELVDGVKNGD FTLELDFEPF NASVPRPTLP KYIGDGVEFL NRHLSAKLFH DKESLLPLLK FLRLHSHQGK TLMLNERVQN
201: LNSLQHILRK AEEYLAGLAP ETPYEDFEAK FEEIGLERGW GNNAERVLDM IRLLLDLLEA PDPCTLENFL GRVPMVFNVV ILSPHGYFAQ DNVLGYPDTG
301: GQVVYILDQV RAMETDMLQR IQQQGLNITP RILILTRLLP DAVGTTCGER LERVDGSEYC DILRVPFRTE KGIVRKWISR FEVWPYLETY TEDAAVELAK
401: ELKGKPDLII GNYSDGNLVA SLLAHKLGVT QCTIAHALEK TKYPDSDIYW KKLDDKYHFS CQFTADLFAM NHTDFIITST LQEIAGSKDT VGQYESHTAF
501: TLPGLYRVVH GIDVFDPKFN IVSPGADMSI YFPYTEEKRR LTKFHPEIEE LLYSNVENEE HLCVLKDKKK PILFTMARLD RVKNLSGLVE WYGKNKRLRE
601: LVNLVVVGGD RRKESKDNEE KAEMKKMYDL IEEYKLNGQF RWISSQMNRV RNGELYRYIC DTKGAFVQPA LYEAFGLTVV EAMTCGLPTF ATCKGGPAEI
701: IVHGKSGFHI DPYHGDQAAD TLADFFTKCK EDPSHWDQIS KGGLQRIEEK YTWQIYSQRL LTLTGVYGFW KHVSNLDRLE SRRYLEMFYA LKYRPLAQAV
801: PLAQE
Best Arabidopsis Sequence Match ( AT5G20830.3 )
(BLAST)
001: MANAERMITR VHSQRERLNE TLVSERNEVL ALLSRVEAKG KGILQQNQII AEFEALPEQT RKKLEGGPFF DLLKSTQEAI VLPPWVALAV RPRPGVWEYL
101: RVNLHALVVE ELQPAEFLHF KEELVDGVKN GNFTLELDFE PFNASIPRPT LHKYIGNGVD FLNRHLSAKL FHDKESLLPL LKFLRLHSHQ GKNLMLSEKI
201: QNLNTLQHTL RKAEEYLAEL KSETLYEEFE AKFEEIGLER GWGDNAERVL DMIRLLLDLL EAPDPCTLET FLGRVPMVFN VVILSPHGYF AQDNVLGYPD
301: TGGQVVYILD QVRALEIEML QRIKQQGLNI KPRILILTRL LPDAVGTTCG ERLERVYDSE YCDILRVPFR TEKGIVRKWI SRFEVWPYLE TYTEDAAVEL
401: SKELNGKPDL IIGNYSDGNL VASLLAHKLG VTQCTIAHAL EKTKYPDSDI YWKKLDDKYH FSCQFTADIF AMNHTDFIIT STFQEIAGSK ETVGQYESHT
501: AFTLPGLYRV VHGIDVFDPK FNIVSPGADM SIYFPYTEEK RRLTKFHSEI EELLYSDVEN KEHLCVLKDK KKPILFTMAR LDRVKNLSGL VEWYGKNTRL
601: RELANLVVVG GDRRKESKDN EEKAEMKKMY DLIEEYKLNG QFRWISSQMD RVRNGELYRY ICDTKGAFVQ PALYEAFGLT VVEAMTCGLP TFATCKGGPA
701: EIIVHGKSGF HIDPYHGDQA ADTLADFFTK CKEDPSHWDE ISKGGLQRIE EKYTWQIYSQ RLLTLTGVYG FWKHVSNLDR LEARRYLEMF YALKYRPLAQ
801: AVPLAQDD
Arabidopsis Description
SUS1Sucrose synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P49040]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.