CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46981	Canola	cytosol, nucleus, plastid	95.65	44.9
GSMUA_Achr3P08200_001	Banana	mitochondrion	38.51	34.25
CDX86250	Canola	cytosol	63.35	12.94
CDX85398	Canola	cytosol	62.73	12.52
VIT_07s0005g00750.t01	Wine grape	cytosol	55.9	11.1
GSMUA_Achr8P22470_001	Banana	cytosol	54.04	10.75
TraesCS4D01G169800.1	Wheat	cytosol	52.8	10.51
TraesCS4A01G140000.1	Wheat	cytosol, golgi, unclear	52.8	10.51
TraesCS4B01G167500.1	Wheat	cytosol	52.17	10.38
HORVU4Hr1G049500.3	Barley	cytosol	52.17	10.37
CDY22042	Canola	cytosol, mitochondrion	51.55	10.23
PGSC0003DMT400017087	Potato	cytosol	51.55	10.23
Solyc09g098590.2.1	Tomato	cytosol	51.55	10.22
EER92301	Sorghum	cytosol	50.93	10.14
CDY52781	Canola	mitochondrion	50.93	10.11
CDX88838	Canola	endoplasmic reticulum, golgi	46.58	10.09
Os03t0340500-01	Rice	cytosol, plasma membrane, plastid	49.69	9.89
Zm00001d029091_P003	Maize	cytosol	50.31	9.83
Zm00001d029087_P002	Maize	cytosol	50.31	9.54
CDY16569	Canola	cytosol	46.58	9.32
CDX92432	Canola	cytosol	46.58	9.32
CDX70945	Canola	cytosol	46.58	9.31
Zm00001d010801_P001	Maize	cytosol	11.18	7.35
CDY38565	Canola	cytosol	34.78	6.62
CDY26996	Canola	cytosol	34.78	6.62
CDX72985	Canola	cytosol	35.4	6.1
CDX96472	Canola	cytosol	35.4	6.1
CDX68228	Canola	cytosol	33.54	5.74
CDY11107	Canola	cytosol	33.54	5.74
CDY69825	Canola	cytosol	4.35	4.02
CDY35815	Canola	cytosol	21.74	3.62
CDX92473	Canola	cytosol	21.74	3.62
GSMUA_Achr3P08190_001	Banana	cytosol	13.66	3.53
CDY45096	Canola	cytosol	20.5	3.4
CDX88168	Canola	nucleus	18.63	3.12
CDX70382	Canola	cytosol	18.01	3.01
CDX80498	Canola	cytosol	18.01	3.0
CDX78411	Canola	cytosol	18.63	2.89
CDX89776	Canola	cytosol	17.39	2.63
CDY18270	Canola	cytosol	17.39	2.63
CDY71780	Canola	cytosol, extracellular	5.59	2.53
CDY41124	Canola	cytosol	14.29	2.2
CDX94270	Canola	nucleus	1.86	0.63
CDX73329	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX87785	EnsemblPlantsGene:GSBRNA2T00146885001	Gene3D:2.130.10.10	Gene3D:3.40.50.2000	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015943	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat_CS	PANTHER:PTHR12526	PANTHER:PTHR12526:SF509
ProteinID:CDX87785	ProteinID:CDX87785.1	ScanProsite:PS00678	UniParc:UPI0004EEFCCE	MapMan:35.1	:

Description

BnaC02g31640D

Coordinates

chrLK031851:+:1423269..1424713

Molecular Weight (calculated)

18904.5 Da

IEP (calculated)

7.110

GRAVY (calculated)

-0.178

Length

161 amino acids

Sequence
(BLAST)

001: MIVLILDPCL VAAGHKDGNV GFWNLDCQNE EEDGGVSLFK PHTYSVTSLV FQQNSFSKVA TTLVSFFETC NADPSHWEKI SDGGLERIYE RYTWKKYSER
101: LLTLAGVYSF WKHVSKLERR ETRRYLEMFY SLKFRDLVSV IHSSFFQFLR LVYLYDHITT C

Best Arabidopsis Sequence Match ( AT5G49190.3 )
(BLAST)

001: MKVLQSAEEA IVLPPFVALA IRPRPGVREY VRVNVYELSV DHLTVSEYLR FKEELVNGHA NGDYLLELDF EPFNATLPRP TRSSSIGNGV QFLNRHLSSI
101: MFRNKESMEP LLEFLRTHKH DGRPMMLNDR IQNIPILQGA LARAEEFLSK LPLATPYSEF EFELQGMGFE RGWGDTAQKV SEMVHLLLDI LQAPDPSVLE
201: TFLGRIPMVF NVVILSPHGY FGQANVLGLP DTGGQVVYIL DQVRALENEM LLRIQKQGLE VIPKILIVTR LLPEAKGTTC NQRLERVSGT EHAHILRIPF
301: RTEKGILRKW ISRFDVWPYL ETFAEDASNE ISAELQGVPN LIIGNYSDGN LVASLLASKL GVIQCNIAHA LEKTKYPESD IYWRNHEDKY HFSSQFTADL
401: IAMNNADFII TSTYQEIAGS KNNVGQYESH TAFTMPGLYR VVHGIDVFDP KFNIVSPGAD MTIYFPYSDK ERRLTALHES IEELLFSAEQ NDEHVGLLSD
501: QSKPIIFSMA RLDRVKNLTG LVECYAKNSK LRELANLVIV GGYIDENQSR DREEMAEIQK MHSLIEQYDL HGEFRWIAAQ MNRARNGELY RYIADTKGVF
601: VQPAFYEAFG LTVVESMTCA LPTFATCHGG PAEIIENGVS GFHIDPYHPD QVAATLVSFF ETCNTNPNHW VKISEGGLKR IYERYTWKKY SERLLTLAGV
701: YAFWKHVSKL ERRETRRYLE MFYSLKFRDL ANSIPLATDE N

Arabidopsis Description

SUS2Sucrose synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q00917]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.