Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87785 | Canola | cytosol | 44.9 | 95.65 |
| GSMUA_Achr3P08200_001 | Banana | mitochondrion | 19.83 | 37.57 |
| CDX86250 | Canola | cytosol | 40.82 | 17.77 |
| CDX85398 | Canola | cytosol | 40.52 | 17.22 |
| VIT_07s0005g00750.t01 | Wine grape | cytosol | 37.9 | 16.03 |
| CDY22042 | Canola | cytosol, mitochondrion | 36.15 | 15.29 |
| CDY52781 | Canola | mitochondrion | 36.15 | 15.29 |
| GSMUA_Achr8P22470_001 | Banana | cytosol | 35.86 | 15.2 |
| TraesCS4B01G167500.1 | Wheat | cytosol | 35.86 | 15.2 |
| TraesCS4A01G140000.1 | Wheat | cytosol, golgi, unclear | 35.86 | 15.2 |
| TraesCS4D01G169800.1 | Wheat | cytosol | 35.57 | 15.08 |
| CDX92432 | Canola | cytosol | 35.28 | 15.03 |
| CDY16569 | Canola | cytosol | 35.28 | 15.03 |
| CDX70945 | Canola | cytosol | 35.28 | 15.01 |
| HORVU4Hr1G049500.3 | Barley | cytosol | 35.28 | 14.94 |
| PGSC0003DMT400017087 | Potato | cytosol | 35.28 | 14.92 |
| Solyc09g098590.2.1 | Tomato | cytosol | 35.28 | 14.9 |
| EER92301 | Sorghum | cytosol | 34.4 | 14.59 |
| CDX88838 | Canola | endoplasmic reticulum, golgi | 31.49 | 14.54 |
| Os03t0340500-01 | Rice | cytosol, plasma membrane, plastid | 33.82 | 14.34 |
| Zm00001d029091_P003 | Maize | cytosol | 34.11 | 14.2 |
| Zm00001d029087_P002 | Maize | cytosol | 34.11 | 13.78 |
| CDY26996 | Canola | cytosol | 26.24 | 10.64 |
| CDY38565 | Canola | cytosol | 26.24 | 10.64 |
| CDX72985 | Canola | cytosol | 27.7 | 10.17 |
| CDX96472 | Canola | cytosol | 27.11 | 9.95 |
| CDX68228 | Canola | cytosol | 25.95 | 9.47 |
| CDY11107 | Canola | cytosol | 25.95 | 9.47 |
| Zm00001d010801_P001 | Maize | cytosol | 5.83 | 8.16 |
| CDY71780 | Canola | cytosol, extracellular | 7.87 | 7.58 |
| GSMUA_Achr3P08190_001 | Banana | cytosol | 13.7 | 7.53 |
| CDX73329 | Canola | cytosol | 1.46 | 6.58 |
| CDX92473 | Canola | cytosol | 16.62 | 5.9 |
| CDY35815 | Canola | cytosol | 16.33 | 5.8 |
| CDY45096 | Canola | cytosol | 16.04 | 5.66 |
| CDX88168 | Canola | nucleus | 14.58 | 5.21 |
| CDX80498 | Canola | cytosol | 14.29 | 5.07 |
| CDX70382 | Canola | cytosol | 13.99 | 4.99 |
| CDX78411 | Canola | cytosol | 14.29 | 4.72 |
| CDX89776 | Canola | cytosol | 14.58 | 4.7 |
| CDY18270 | Canola | cytosol | 14.58 | 4.69 |
| CDY41124 | Canola | cytosol | 13.12 | 4.3 |
| CDY69825 | Canola | cytosol | 2.04 | 4.02 |
| CDX94270 | Canola | nucleus | 4.96 | 3.59 |
Protein Annotations
| Gene3D:2.130.10.10 | Gene3D:3.40.50.2000 | MapMan:35.1 | UniProt:A0A078IAW1 | EnsemblPlants:CDY46981 | ProteinID:CDY46981 |
| ProteinID:CDY46981.1 | InterPro:Cmr1/WDR76 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006950 |
| GO:GO:0006974 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00086468001 | InterPro:IPR015943 | PANTHER:PTHR14773 |
| PANTHER:PTHR14773:SF0 | SUPFAM:SSF50978 | UniParc:UPI0004EEF50E | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat_dom_sf | SEG:seg |
Description
BnaC09g14230DBnaC09g14230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAW1]
Coordinates
chrLK032693:-:47093..48337
Molecular Weight (calculated)
39323.5 Da
IEP (calculated)
7.274
GRAVY (calculated)
-0.473
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEYERKRL ENIRRNDEMM ASLNVHAKAS LLSASTKRSR DHPKSLKKQQ QKKKESEAPI VKRQSLRTRG LTPDSDGLPH GVSECPKAPL PLDDGDGSHS
101: QFVDTLSGIT RKPNGETSTV TENDDDSFDL GSLCLEPHDV KRVVPERVLV VKFLPCEGVK LVAAGDKDGN VGFWNLDCQN EEEDGGVSLF KPHTYSVTSL
201: VFQQNSFSKI NQSYDFSDVY CILGFSVFLY DFFLLNPFAK VATTLVSFFE TCNADPSHWE KISDGGLERI YERYTWKKYS ERLLTLAGVY SFWKHVSKLE
301: RRETRRYLEM FYSLKFRDLV SVIHSSFFQF LRLVYLYDHI TTC
101: QFVDTLSGIT RKPNGETSTV TENDDDSFDL GSLCLEPHDV KRVVPERVLV VKFLPCEGVK LVAAGDKDGN VGFWNLDCQN EEEDGGVSLF KPHTYSVTSL
201: VFQQNSFSKI NQSYDFSDVY CILGFSVFLY DFFLLNPFAK VATTLVSFFE TCNADPSHWE KISDGGLERI YERYTWKKYS ERLLTLAGVY SFWKHVSKLE
301: RRETRRYLEM FYSLKFRDLV SVIHSSFFQF LRLVYLYDHI TTC
001: MATEYERKRL ENIRRNDEML AALNVRAKAS SLLSAAKRSR DDSKSFKKKK PKPASTPTVI RMSLRTRGLN PDSAGLPDGF SDFRMGSQIT HNQPSPQKQS
101: PRLLAPIPFE SAYEGYGSYT QLVDTLLGIE SKSCRGKLVK GEIGVVKDEN ESPMVRTRSS SRVSKVSVKK EEPEDDSFSD YVNKEFSIPV KPEKIEFDLD
201: LLTLEPQNVA RVVPGRIFVV QFLPCENVKM VAAGDKLGNV GFWNLDCGNE EDNDGIYLFT PHSAPVSSIV FQQNSLSRVI SSSYDGLIRL MDVEKSVFDL
301: VYSTDEAIFS LSQRPNDEQS LYFGQDYGVF NVWDLRAGKS VFHWELHERR INSIDFNPQN PHVMATSSTD GTACLWDLRS MGAKKPKTLS TVNHSRAVHS
401: AYFSPSGLSL ATTSLDNYIG VLSGANFENT CMIYHNNTSR WISKFKAVWG WDDSYIYVGN LSKKIDVINP KLKRTVMELH NPLQRAIPCR IHCHPYNVGT
501: LAGSTAGGQV YVWTTK
101: PRLLAPIPFE SAYEGYGSYT QLVDTLLGIE SKSCRGKLVK GEIGVVKDEN ESPMVRTRSS SRVSKVSVKK EEPEDDSFSD YVNKEFSIPV KPEKIEFDLD
201: LLTLEPQNVA RVVPGRIFVV QFLPCENVKM VAAGDKLGNV GFWNLDCGNE EDNDGIYLFT PHSAPVSSIV FQQNSLSRVI SSSYDGLIRL MDVEKSVFDL
301: VYSTDEAIFS LSQRPNDEQS LYFGQDYGVF NVWDLRAGKS VFHWELHERR INSIDFNPQN PHVMATSSTD GTACLWDLRS MGAKKPKTLS TVNHSRAVHS
401: AYFSPSGLSL ATTSLDNYIG VLSGANFENT CMIYHNNTSR WISKFKAVWG WDDSYIYVGN LSKKIDVINP KLKRTVMELH NPLQRAIPCR IHCHPYNVGT
501: LAGSTAGGQV YVWTTK
Arabidopsis Description
DRS1DROUGHT SENSITIVE 1 [Source:UniProtKB/TrEMBL;Acc:Q9SAI7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.