Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41124 | Canola | cytosol | 96.55 | 16.05 |
| CDX88168 | Canola | nucleus | 43.1 | 7.81 |
| CDX80498 | Canola | cytosol | 42.53 | 7.65 |
| CDX70382 | Canola | cytosol | 41.38 | 7.48 |
| CDX92473 | Canola | cytosol | 39.08 | 7.04 |
| CDY35815 | Canola | cytosol | 39.08 | 7.04 |
| CDX78411 | Canola | cytosol | 41.95 | 7.03 |
| CDY45096 | Canola | cytosol | 37.93 | 6.79 |
| CDX89776 | Canola | cytosol | 39.66 | 6.48 |
| CDY18270 | Canola | cytosol | 39.66 | 6.48 |
| CDX87785 | Canola | cytosol | 4.02 | 4.35 |
| CDY46981 | Canola | cytosol, nucleus, plastid | 4.02 | 2.04 |
| CDX94270 | Canola | nucleus | 4.02 | 1.48 |
| CDX72985 | Canola | cytosol | 5.75 | 1.07 |
| CDX96472 | Canola | cytosol | 5.75 | 1.07 |
| CDX68228 | Canola | cytosol | 5.75 | 1.06 |
| CDY11107 | Canola | cytosol | 5.75 | 1.06 |
| CDY26996 | Canola | cytosol | 5.17 | 1.06 |
| CDY38565 | Canola | cytosol | 4.6 | 0.95 |
| CDX86250 | Canola | cytosol | 3.45 | 0.76 |
| CDX85398 | Canola | cytosol | 3.45 | 0.74 |
| CDY22042 | Canola | cytosol, mitochondrion | 3.45 | 0.74 |
| CDY52781 | Canola | mitochondrion | 3.45 | 0.74 |
| CDX88838 | Canola | endoplasmic reticulum, golgi | 2.87 | 0.67 |
| CDY16569 | Canola | cytosol | 2.87 | 0.62 |
| CDX92432 | Canola | cytosol | 2.87 | 0.62 |
| CDX70945 | Canola | cytosol | 2.87 | 0.62 |
| CDX73329 | Canola | cytosol | 0.0 | 0.0 |
| CDY71780 | Canola | cytosol, extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY69825 | EnsemblPlantsGene:GSBRNA2T00092805001 | Gene3D:3.40.50.1000 | Gene3D:3.90.1070.10 | InterPro:HAD_sf | InterPro:IPR023214 |
| InterPro:SPP_N | PFAM:PF05116 | ProteinID:CDY69825 | ProteinID:CDY69825.1 | UniParc:UPI0004EEA8EA | UniProt:A0A078JTR8 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaCnng65550DBnaCnng65550D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JTR8]
Coordinates
chrLK040441:-:2915..3760
Molecular Weight (calculated)
19675.7 Da
IEP (calculated)
8.192
GRAVY (calculated)
-0.340
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: LRSVILRLAC TKLETEDDIT EYTSACSTRC YAISVKQGVE TRRVDDLRQR LRMRGLRCNI VYTHAATRLN VIPLCASRLQ AVRYLSIRWG IDMKKSVFFV
101: GEKGDTDYED LLGGLHKTII LKGAVGSDSE KLLRSEENFK REDVVPRDSP NISYVEENGG PPEMLSTLEA YGIK
101: GEKGDTDYED LLGGLHKTII LKGAVGSDSE KLLRSEENFK REDVVPRDSP NISYVEENGG PPEMLSTLEA YGIK
0001: MARNDWINSY LEAILDVGTS KKKRFESNSK IVQKLGDINS KDHQEKVFGD MNGKDHQEKV FSPIKYFVEE VVNSFDESDL YKTWIKVIAT RNTRERSNRL
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
Arabidopsis Description
SPS4Probable sucrose-phosphate synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:F4JLK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.