CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037432.1-P	Field mustard	cytosol	99.75	97.4
CDX85398	Canola	cytosol	98.86	96.53
AT5G49190.1	Thale cress	cytosol	93.91	91.7
VIT_05s0077g01930.t01	Wine grape	cytosol	82.23	80.2
VIT_12s0057g00130.t01	Wine grape	cytosol	17.01	75.71
GSMUA_Achr3P08200_001	Banana	mitochondrion	17.39	75.69
VIT_00s1562g00010.t01	Wine grape	cytosol	16.88	75.14
KRH12090	Soybean	endoplasmic reticulum	76.14	74.81
GSMUA_Achr8P22470_001	Banana	cytosol	76.27	74.29
CDY52781	Canola	mitochondrion	74.75	72.63
CDY22042	Canola	cytosol, mitochondrion	74.62	72.5
Os03t0340500-01	Rice	cytosol, plasma membrane, plastid	74.37	72.44
EER92301	Sorghum	cytosol	73.86	71.94
TraesCS4D01G169800.1	Wheat	cytosol	73.6	71.69
HORVU4Hr1G049500.3	Barley	cytosol	73.48	71.48
TraesCS4A01G140000.1	Wheat	cytosol, golgi, unclear	73.22	71.32
GSMUA_Achr3P08190_001	Banana	cytosol	56.35	71.15
TraesCS4B01G167500.1	Wheat	cytosol	72.97	71.08
Zm00001d029091_P003	Maize	cytosol	73.98	70.75
Zm00001d029087_P002	Maize	cytosol	73.98	68.67
CDX88838	Canola	endoplasmic reticulum, golgi	63.45	67.29
CDX70945	Canola	cytosol	66.5	65.01
CDX92432	Canola	cytosol	65.74	64.35
CDY16569	Canola	cytosol	65.61	64.22
VIT_10s0071g00080.t01	Wine grape	cytosol	6.22	63.64
CDX87785	Canola	cytosol	12.94	63.35
VIT_10s0071g00070.t01	Wine grape	cytosol	6.35	61.73
Zm00001d010801_P001	Maize	cytosol	17.64	56.73
CDY71780	Canola	cytosol, extracellular	23.48	51.97
CDY38565	Canola	cytosol	53.81	50.12
CDY26996	Canola	cytosol	53.43	49.76
CDX72985	Canola	cytosol	55.33	46.68
CDX96472	Canola	cytosol	54.95	46.31
CDX68228	Canola	cytosol	54.95	46.06
CDY11107	Canola	cytosol	54.7	45.85
CDY46981	Canola	cytosol, nucleus, plastid	17.77	40.82
CDX73329	Canola	cytosol	2.28	23.68
CDX94270	Canola	nucleus	10.66	17.76
CDX92473	Canola	cytosol	21.07	17.18
CDY35815	Canola	cytosol	21.07	17.18
CDX70382	Canola	cytosol	20.81	17.05
CDY45096	Canola	cytosol	20.81	16.87
CDX88168	Canola	nucleus	20.3	16.67
CDX80498	Canola	cytosol	20.3	16.55
CDX78411	Canola	cytosol	21.45	16.27
CDX89776	Canola	cytosol	21.45	15.88
CDY18270	Canola	cytosol	21.45	15.87
CDY41124	Canola	cytosol	19.8	14.9
CDY69825	Canola	cytosol	0.76	3.45

Protein Annotations

KEGG:00500+2.4.1.13	Gene3D:1.20.120.1230	MapMan:3.1.4.2	Gene3D:3.10.450.330	Gene3D:3.40.50.2000	GO:A0A078DAH7
EnsemblPlants:CDX86250	ProteinID:CDX86250	ProteinID:CDX86250.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0005985	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016157	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00144354001	InterPro:Glyco_trans_1	PFAM:PF00534	PFAM:PF00862	PANTHER:PTHR12526	PANTHER:PTHR12526:SF509
MetaCyc:PWY-3801	SUPFAM:SSF53756	InterPro:Sucrose_synth	InterPro:Sucrose_synthase_pln/cyn	TIGRFAMs:TIGR02470	UniParc:UPI0004EE7BC1

Description

BnaA06g29670D

Coordinates

chrLK031845:+:603472..607727

Molecular Weight (calculated)

89556.5 Da

IEP (calculated)

6.382

GRAVY (calculated)

-0.203

Length

788 amino acids

Sequence
(BLAST)

001: MPTGRFETMR EWVHDAISAQ RNELLSLFSR YVAQGKGILQ SHQLIDEFLK TVKVDGTTED LKNRPFMKVL QSAEEAIVLP PFVALAIRPR PGVREYVRVN
101: VYELSVDHLT VSEYLRFKEE LVNGHANGNY LLELDFEPFN ATFPRPTRSS SIGNGVQFLN RHLSSIMFRN KDSLEPLLEF LRTHKHDGRA MMLNDRILNI
201: RTLQEALARA EEFLSKLPLA TPYSEFEFEL QGMGFERGWG DTSQKVSEMV HLLLDILQAP DPSVLETFLG RIPMVFNVVI LSPHGYFGQA NVLGLPDTGG
301: QVVYILDQVR ALESEMLLRI QKQGLDVTPK ILIVTRLIPE AEGTTCNQRL EKVSGTEHAH ILRIPFRTEK GILRKWISRF DVWPYLETFA EDASNEIAAE
401: LQGVPNLIIG NYSDGNLVAS LLACKLGVIQ CNIAHALEKT NQFTADLIAM NNADFIITST YQEIAGSKNK VGQYESHTAF TLPGLYRVVH GINVFDPKFN
501: IVSPGADMTI YFPYSDKERR LTALHESIEE LLFSSEQNVE HVGFLSDQTK PIIFSMARLD RVKNLTGLVE CYAKNGKLRE VANLVVVGGY VDVNQSRDRE
601: EMAEIQKMHS LIKQYGLHGE FRWIAAQMNR ARNGELYRYI ADTKGVFVQP AFYEAFGLTV VESMTCGLPT FATCHGGPAE IIENGVSGFH IDPYHPEQVA
701: TTLVSFFETC NADPSHWEKI SDGGLKRIYE RYTWKKYSER LLTLAGVYSF WKHVSKLERR ETRRYLEMFY SLKFRDLANS IPLATDEH

Best Arabidopsis Sequence Match ( AT5G49190.1 )
(BLAST)

001: MPTGRFETMR EWVYDAISAQ RNELLSLFSR YVAQGKGILQ SHQLIDEFLK TVKVDGTLED LNKSPFMKVL QSAEEAIVLP PFVALAIRPR PGVREYVRVN
101: VYELSVDHLT VSEYLRFKEE LVNGHANGDY LLELDFEPFN ATLPRPTRSS SIGNGVQFLN RHLSSIMFRN KESMEPLLEF LRTHKHDGRP MMLNDRIQNI
201: PILQGALARA EEFLSKLPLA TPYSEFEFEL QGMGFERGWG DTAQKVSEMV HLLLDILQAP DPSVLETFLG RIPMVFNVVI LSPHGYFGQA NVLGLPDTGG
301: QVVYILDQVR ALENEMLLRI QKQGLEVIPK ILIVTRLLPE AKGTTCNQRL ERVSGTEHAH ILRIPFRTEK GILRKWISRF DVWPYLETFA EDASNEISAE
401: LQGVPNLIIG NYSDGNLVAS LLASKLGVIQ CNIAHALEKT KYPESDIYWR NHEDKYHFSS QFTADLIAMN NADFIITSTY QEIAGSKNNV GQYESHTAFT
501: MPGLYRVVHG IDVFDPKFNI VSPGADMTIY FPYSDKERRL TALHESIEEL LFSAEQNDEH VGLLSDQSKP IIFSMARLDR VKNLTGLVEC YAKNSKLREL
601: ANLVIVGGYI DENQSRDREE MAEIQKMHSL IEQYDLHGEF RWIAAQMNRA RNGELYRYIA DTKGVFVQPA FYEAFGLTVV ESMTCALPTF ATCHGGPAEI
701: IENGVSGFHI DPYHPDQVAA TLVSFFETCN TNPNHWVKIS EGGLKRIYER YTWKKYSERL LTLAGVYAFW KHVSKLERRE TRRYLEMFYS LKFRDLANSI
801: PLATDEN

Arabidopsis Description

SUS2Sucrose synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q00917]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.