Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80498 | Canola | cytosol | 98.54 | 97.83 |
| Bra009830.1-P | Field mustard | nucleus | 99.9 | 91.59 |
| CDX70382 | Canola | cytosol | 85.42 | 85.24 |
| CDX78411 | Canola | cytosol | 85.42 | 78.92 |
| CDX92473 | Canola | cytosol | 70.62 | 70.19 |
| CDY35815 | Canola | cytosol | 70.52 | 70.08 |
| CDY45096 | Canola | cytosol | 68.85 | 68.0 |
| VIT_04s0008g05730.t01 | Wine grape | cytosol | 74.17 | 67.3 |
| GSMUA_Achr4P06050_001 | Banana | cytosol | 73.02 | 66.19 |
| GSMUA_Achr9P22510_001 | Banana | cytosol | 72.19 | 65.32 |
| Solyc08g042000.2.1 | Tomato | nucleus | 69.79 | 64.11 |
| Os08t0301500-01 | Rice | plasma membrane | 68.54 | 61.73 |
| KXG29640 | Sorghum | cytosol | 61.88 | 61.62 |
| Zm00001d015570_P002 | Maize | cytosol | 61.88 | 61.62 |
| TraesCS6A01G144800.1 | Wheat | cytoskeleton, cytosol, nucleus | 61.77 | 61.51 |
| TraesCS6D01G133800.1 | Wheat | cytosol | 61.35 | 61.1 |
| TraesCS7D01G508100.1 | Wheat | cytosol | 61.77 | 61.07 |
| TraesCS7B01G434300.1 | Wheat | cytosol | 61.77 | 61.07 |
| TraesCS7A01G518200.1 | Wheat | cytosol | 61.77 | 61.01 |
| OQU78428 | Sorghum | nucleus | 67.71 | 60.75 |
| Zm00001d050125_P002 | Maize | nucleus | 66.88 | 60.62 |
| TraesCS3D01G013000.1 | Wheat | nucleus | 67.08 | 60.24 |
| TraesCS3A01G015500.1 | Wheat | golgi | 66.98 | 60.04 |
| TraesCSU01G044500.2 | Wheat | unclear | 66.77 | 59.57 |
| Zm00001d036749_P001 | Maize | cytosol | 60.31 | 59.38 |
| CDX73329 | Canola | cytosol | 4.69 | 59.21 |
| KXG20466 | Sorghum | cytosol | 60.21 | 58.98 |
| Os02t0184400-01 | Rice | endoplasmic reticulum, golgi | 61.46 | 58.36 |
| HORVU6Hr1G028330.1 | Barley | endoplasmic reticulum, golgi | 62.08 | 57.75 |
| TraesCS6B01G173000.2 | Wheat | endoplasmic reticulum, plasma membrane | 61.77 | 57.02 |
| HORVU3Hr1G002280.1 | Barley | plastid | 66.88 | 56.81 |
| CDX94270 | Canola | nucleus | 26.98 | 54.76 |
| HORVU7Hr1G115590.10 | Barley | nucleus | 56.56 | 54.35 |
| CDY18270 | Canola | cytosol | 58.96 | 53.15 |
| CDX89776 | Canola | cytosol | 58.85 | 53.1 |
| Zm00001d046595_P002 | Maize | cytosol | 53.75 | 52.76 |
| Os06t0643800-01 | Rice | plasma membrane | 10.0 | 52.17 |
| PGSC0003DMT400076855 | Potato | cytosol, peroxisome, plastid | 28.33 | 52.11 |
| CDY41124 | Canola | cytosol | 55.94 | 51.29 |
| CDY69825 | Canola | cytosol | 7.81 | 43.1 |
| Zm00001d016399_P002 | Maize | extracellular | 6.88 | 42.04 |
| CDX88838 | Canola | endoplasmic reticulum, golgi | 16.25 | 21.0 |
| CDX86250 | Canola | cytosol | 16.67 | 20.3 |
| CDY52781 | Canola | mitochondrion | 17.08 | 20.22 |
| CDY22042 | Canola | cytosol, mitochondrion | 16.98 | 20.1 |
| CDX85398 | Canola | cytosol | 16.67 | 19.83 |
| CDX70945 | Canola | cytosol | 16.56 | 19.73 |
| CDY16569 | Canola | cytosol | 16.35 | 19.5 |
| CDX92432 | Canola | cytosol | 16.35 | 19.5 |
| CDX87785 | Canola | cytosol | 3.12 | 18.63 |
| CDY38565 | Canola | cytosol | 16.25 | 18.44 |
| CDY26996 | Canola | cytosol | 16.15 | 18.32 |
| CDX68228 | Canola | cytosol | 16.67 | 17.02 |
| CDY11107 | Canola | cytosol | 16.67 | 17.02 |
| CDX96472 | Canola | cytosol | 16.46 | 16.9 |
| CDX72985 | Canola | cytosol | 16.35 | 16.81 |
| CDY46981 | Canola | cytosol, nucleus, plastid | 5.21 | 14.58 |
| CDY71780 | Canola | cytosol, extracellular | 5.1 | 13.76 |
Protein Annotations
| KEGG:00500+2.4.1.14 | MapMan:3.1.2.7 | Gene3D:3.40.50.1000 | Gene3D:3.40.50.2000 | Gene3D:3.90.1070.10 | GO:A0A078DLQ1 |
| EnsemblPlants:CDX88168 | ProteinID:CDX88168 | ProteinID:CDX88168.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 |
| GO:GO:0005985 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016157 | GO:GO:0016740 |
| GO:GO:0046524 | EnsemblPlantsGene:GSBRNA2T00147625001 | InterPro:Glyco_trans_1 | InterPro:HAD_sf | InterPro:IPR023214 | PFAM:PF00534 |
| PFAM:PF00862 | PFAM:PF05116 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF334 | MetaCyc:PWY-7238 | MetaCyc:PWY-7347 |
| InterPro:SPP_N | InterPro:SPS_C | SUPFAM:SSF53756 | InterPro:Sucrose_synth | InterPro:SucrsPsyn_pln | TIGRFAMs:TIGR02468 |
| UniPathway:UPA00371 | UniParc:UPI0004EF48CD | SEG:seg | : | : | : |
Description
BnaA06g27590D
Coordinates
chrLK031854:+:1092876..1097622
Molecular Weight (calculated)
107215.0 Da
IEP (calculated)
7.114
GRAVY (calculated)
-0.364
Length
960 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGNDWVNSY LEAILAAEPG IGDSKYSDSK SSLLLRERGH FSPTRYFVEE VITGFDETDL HRSWIQAAAT RSPQERNTRL ENLCWRIWNL ARQKKQVAGK
101: YAKRTAKRHL LRERARLEAT ADMSEDLSEG EKADVPGEIL TPTDSSKGRM SRISSVDKLY IVLISLHGLI RGENMELGRD SDTGGQVKYV VELARDLGSM
201: PGVYRVDLLT RQVSAPDVDW SYAEPSEMLN PLESDTDQEH GESSGAYIIR IPFGPKDKYV EKELLWPHIP EFVDRALSHV MQMSKALSEH IGGGKPVWPV
301: AIHGHYADAG DSTALLSGAL NVPMVFTGHS LGRDKLEQLL KQGRPKEEIN SNYKIMRRIE AEELCLDASE IIITSTRQEI EEQWRLYDGF DPVLERKLRA
401: RMKRGVSCHG RFMPRMVVIP PGMEFHHIVP HDVDNDGEGA RDDENPRSPD PPIWSEIMRF FSNPRKPMIL ALARPDPKKN LVTLVKAFGE CRPLRELANL
501: TLIMGNRDDI DELSSTNASV LLSILKLIDK YDLYGQVAMP KHHKQSDVPE IYRLGAKTKG VFINPAVIEP FGLTLIEAGA HGLPIVATKN GGPVDINRVL
601: DNGLLVDPHD QQAIADALLK LVSDKNLWTR CRQNGLKNIH LFSWPEHCKT YLSRIAATSP DKVYGSGKIP TLKRRKYIFV ISVDCDKASD LLEVVKTVID
701: VGGRNGSSIG FILSTSMNVS ETHSTIISGG LNPQEFDAVI CNSGSELYFT SSASEDKTKL PYALESDYHS HIEYRWGGES LRKTLVRWIS SVHEKKKRQH
801: DGEILSEDES SSSNYCLSFK VKEPTLVPPV KELRKLMRVQ ALRCNAVYCK GGTKLNVIPV LASRSQALRY LLVRWGVDLS KMVVFVGDSG DTDYEGLLGG
901: VHKTVIVKGV ASDATARVLH GNRSYPLEDV TPVNSPNITE AEQCDRDCIK AALEKLGVKI
101: YAKRTAKRHL LRERARLEAT ADMSEDLSEG EKADVPGEIL TPTDSSKGRM SRISSVDKLY IVLISLHGLI RGENMELGRD SDTGGQVKYV VELARDLGSM
201: PGVYRVDLLT RQVSAPDVDW SYAEPSEMLN PLESDTDQEH GESSGAYIIR IPFGPKDKYV EKELLWPHIP EFVDRALSHV MQMSKALSEH IGGGKPVWPV
301: AIHGHYADAG DSTALLSGAL NVPMVFTGHS LGRDKLEQLL KQGRPKEEIN SNYKIMRRIE AEELCLDASE IIITSTRQEI EEQWRLYDGF DPVLERKLRA
401: RMKRGVSCHG RFMPRMVVIP PGMEFHHIVP HDVDNDGEGA RDDENPRSPD PPIWSEIMRF FSNPRKPMIL ALARPDPKKN LVTLVKAFGE CRPLRELANL
501: TLIMGNRDDI DELSSTNASV LLSILKLIDK YDLYGQVAMP KHHKQSDVPE IYRLGAKTKG VFINPAVIEP FGLTLIEAGA HGLPIVATKN GGPVDINRVL
601: DNGLLVDPHD QQAIADALLK LVSDKNLWTR CRQNGLKNIH LFSWPEHCKT YLSRIAATSP DKVYGSGKIP TLKRRKYIFV ISVDCDKASD LLEVVKTVID
701: VGGRNGSSIG FILSTSMNVS ETHSTIISGG LNPQEFDAVI CNSGSELYFT SSASEDKTKL PYALESDYHS HIEYRWGGES LRKTLVRWIS SVHEKKKRQH
801: DGEILSEDES SSSNYCLSFK VKEPTLVPPV KELRKLMRVQ ALRCNAVYCK GGTKLNVIPV LASRSQALRY LLVRWGVDLS KMVVFVGDSG DTDYEGLLGG
901: VHKTVIVKGV ASDATARVLH GNRSYPLEDV TPVNSPNITE AEQCDRDCIK AALEKLGVKI
0001: MAGNEWINGY LEAILDSQAQ GIEETQQKPQ ASVNLREGDG QYFNPTKYFV EEVVTGVDET DLHRTWLKVV ATRNSRERNS RLENMCWRIW HLTRKKKQLE
0101: WEDSQRIANR RLEREQGRRD ATEDLSEDLS EGEKGDGLGE IVQPETPRRQ LQRNLSNLEI WSDDKKENRL YVVLISLHGL VRGENMELGS DSDTGGQVKY
0201: VVELARALAR MPGVYRVDLF TRQICSSEVD WSYAEPTEML TTAEDCDGDE TGESSGAYII RIPFGPRDKY LNKEILWPFV QEFVDGALAH ILNMSKVLGE
0301: QIGKGKPVWP YVIHGHYADA GDSAALLSGA LNVPMVLTGH SLGRNKLEQL LKQGRQSKED INSTYKIKRR IEAEELSLDA AELVITSTRQ EIDEQWGLYD
0401: GFDVKLEKVL RARARRGVNC HGRFMPRMAV IPPGMDFTNV EVQEDTPEGD GDLASLVGGT EGSSPKAVPT IWSEVMRFFT NPHKPMILAL SRPDPKKNIT
0501: TLLKAFGECR PLRELANLTL IMGNRDDIDE LSSGNASVLT TVLKLIDKYD LYGSVAYPKH HKQSDVPDIY RLAANTKGVF INPALVEPFG LTLIEAAAHG
0601: LPMVATKNGG PVDIHRALHN GLLVDPHDQE AIANALLKLV SEKNLWHECR INGWKNIHLF SWPEHCRTYL TRIAACRMRH PQWQTDADEV AAQDDEFSLN
0701: DSLKDVQDMS LRLSMDGDKP SLNGSLEPNS ADPVKQIMSR MRTPEIKSKP ELQGKKQSDN LGSKYPVLRR RERLVVLAVD CYDNEGAPDE KAMVPMIQNI
0801: IKAVRSDPQM AKNSGFAIST SMPLDELTRF LKSAKIQVSE FDTLICSSGS EVYYPGGEEG KLLPDPDYSS HIDYRWGMEG LKNTVWKLMN TTAVGGEARN
0901: KGSPSLIQED QASSNSHCVA YMIKDRSKVM RVDDLRQKLR LRGLRCHPMY CRNSTRMQIV PLLASRSQAL RYLFVRWRLN VANMYVVVGD RGDTDYEELI
1001: SGTHKTVIVK GLVTLGSDAL LRSTDLRDDI VPSESPFIGF LKVDSPVKEI TDIFKQLSKA TA
0101: WEDSQRIANR RLEREQGRRD ATEDLSEDLS EGEKGDGLGE IVQPETPRRQ LQRNLSNLEI WSDDKKENRL YVVLISLHGL VRGENMELGS DSDTGGQVKY
0201: VVELARALAR MPGVYRVDLF TRQICSSEVD WSYAEPTEML TTAEDCDGDE TGESSGAYII RIPFGPRDKY LNKEILWPFV QEFVDGALAH ILNMSKVLGE
0301: QIGKGKPVWP YVIHGHYADA GDSAALLSGA LNVPMVLTGH SLGRNKLEQL LKQGRQSKED INSTYKIKRR IEAEELSLDA AELVITSTRQ EIDEQWGLYD
0401: GFDVKLEKVL RARARRGVNC HGRFMPRMAV IPPGMDFTNV EVQEDTPEGD GDLASLVGGT EGSSPKAVPT IWSEVMRFFT NPHKPMILAL SRPDPKKNIT
0501: TLLKAFGECR PLRELANLTL IMGNRDDIDE LSSGNASVLT TVLKLIDKYD LYGSVAYPKH HKQSDVPDIY RLAANTKGVF INPALVEPFG LTLIEAAAHG
0601: LPMVATKNGG PVDIHRALHN GLLVDPHDQE AIANALLKLV SEKNLWHECR INGWKNIHLF SWPEHCRTYL TRIAACRMRH PQWQTDADEV AAQDDEFSLN
0701: DSLKDVQDMS LRLSMDGDKP SLNGSLEPNS ADPVKQIMSR MRTPEIKSKP ELQGKKQSDN LGSKYPVLRR RERLVVLAVD CYDNEGAPDE KAMVPMIQNI
0801: IKAVRSDPQM AKNSGFAIST SMPLDELTRF LKSAKIQVSE FDTLICSSGS EVYYPGGEEG KLLPDPDYSS HIDYRWGMEG LKNTVWKLMN TTAVGGEARN
0901: KGSPSLIQED QASSNSHCVA YMIKDRSKVM RVDDLRQKLR LRGLRCHPMY CRNSTRMQIV PLLASRSQAL RYLFVRWRLN VANMYVVVGD RGDTDYEELI
1001: SGTHKTVIVK GLVTLGSDAL LRSTDLRDDI VPSESPFIGF LKVDSPVKEI TDIFKQLSKA TA
Arabidopsis Description
SPS3SPS3F [Source:UniProtKB/TrEMBL;Acc:A0A178WKI5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.