Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0643800-01 | Rice | plasma membrane | 16.56 | 88.04 |
| KXG20466 | Sorghum | cytosol | 87.22 | 87.04 |
| Zm00001d036749_P001 | Maize | cytosol | 86.09 | 86.36 |
| Zm00001d016399_P002 | Maize | extracellular | 12.58 | 78.34 |
| TraesCS7D01G508100.1 | Wheat | cytosol | 74.95 | 75.49 |
| Zm00001d015570_P002 | Maize | cytosol | 74.34 | 75.41 |
| TraesCS7A01G518200.1 | Wheat | cytosol | 74.95 | 75.41 |
| TraesCS7B01G434300.1 | Wheat | cytosol | 74.85 | 75.39 |
| HORVU7Hr1G115590.10 | Barley | nucleus | 74.54 | 72.97 |
| GSMUA_Achr4P06050_001 | Banana | cytosol | 60.22 | 55.62 |
| GSMUA_Achr9P22510_001 | Banana | cytosol | 59.61 | 54.95 |
| CDX92473 | Canola | cytosol | 53.58 | 54.24 |
| CDY35815 | Canola | cytosol | 53.48 | 54.14 |
| CDX80498 | Canola | cytosol | 53.37 | 53.98 |
| CDX88168 | Canola | nucleus | 52.76 | 53.75 |
| CDX70382 | Canola | cytosol | 52.86 | 53.74 |
| CDY45096 | Canola | cytosol | 52.86 | 53.19 |
| VIT_11s0118g00200.t01 | Wine grape | cytosol | 56.24 | 52.28 |
| Zm00001d050125_P002 | Maize | nucleus | 56.13 | 51.84 |
| KRH20178 | Soybean | nucleus | 55.62 | 51.37 |
| KRH03629 | Soybean | endoplasmic reticulum | 55.21 | 50.99 |
| PGSC0003DMT400071807 | Potato | cytosol | 54.7 | 50.76 |
| Bra002289.1-P | Field mustard | cytosol | 53.89 | 50.58 |
| Solyc07g007790.2.1 | Tomato | cytosol | 54.5 | 50.57 |
| AT5G20280.1 | Thale cress | cytosol | 53.89 | 50.53 |
| VIT_04s0008g05730.t01 | Wine grape | cytosol | 54.5 | 50.38 |
| Bra020096.1-P | Field mustard | cytosol | 52.45 | 49.81 |
| Bra009830.1-P | Field mustard | nucleus | 53.17 | 49.67 |
| CDX78411 | Canola | cytosol | 52.66 | 49.57 |
| Bra006090.1-P | Field mustard | cytosol | 52.56 | 49.47 |
| AT5G11110.1 | Thale cress | cytosol | 52.56 | 49.09 |
| Solyc08g042000.2.1 | Tomato | nucleus | 52.15 | 48.8 |
| PGSC0003DMT400076855 | Potato | cytosol, peroxisome, plastid | 23.01 | 43.1 |
| Zm00001d012036_P001 | Maize | nucleus | 45.81 | 41.95 |
| Zm00001d042353_P003 | Maize | nucleus | 44.99 | 40.78 |
| Zm00001d048979_P001 | Maize | cytosol | 39.16 | 37.51 |
| Zm00001d045042_P014 | Maize | cytosol, mitochondrion | 14.93 | 17.76 |
| Zm00001d029091_P003 | Maize | cytosol | 14.83 | 17.6 |
| Zm00001d051837_P002 | Maize | cytosol | 15.03 | 17.27 |
| Zm00001d047253_P003 | Maize | cytosol | 14.21 | 17.03 |
| Zm00001d029087_P002 | Maize | cytosol | 14.62 | 16.84 |
| Zm00001d010801_P001 | Maize | cytosol | 3.99 | 15.92 |
| Zm00001d014119_P001 | Maize | cytosol | 0.72 | 4.58 |
| Zm00001d050151_P001 | Maize | cytosol | 0.51 | 3.65 |
Protein Annotations
| KEGG:00500+2.4.1.14 | EntrezGene:100275248 | MapMan:3.1.2.7 | Gene3D:3.40.50.1000 | Gene3D:3.40.50.2000 | Gene3D:3.90.1070.10 |
| UniProt:A0A1D6P3X6 | ProteinID:AQL04676.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0005985 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016157 | GO:GO:0016740 | GO:GO:0016757 |
| InterPro:Glyco_trans_1 | InterPro:HAD_sf | InterPro:IPR023214 | PFAM:PF00534 | PFAM:PF00862 | PFAM:PF05116 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF347 | InterPro:SPP_N | InterPro:SPS_C | SUPFAM:SSF53756 | InterPro:Sucrose_synth |
| UniParc:UPI000842E6B0 | EnsemblPlantsGene:Zm00001d046595 | EnsemblPlants:Zm00001d046595_P002 | EnsemblPlants:Zm00001d046595_T002 | SEG:seg | : |
Description
Putative sucrose-phosphate synthase family protein
Coordinates
chr9:+:97773604..97780433
Molecular Weight (calculated)
109267.0 Da
IEP (calculated)
7.181
GRAVY (calculated)
-0.180
Length
978 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPSSDAVPR TTRESPTLAT TMRSPCFTMD SDSGAAALDR VQAAAAPELV VHSGACGHVG LLPEVELALA KLLLIIDERR QRERLLLVVF VLGFHFEKEE
101: AIRLSKHRLE TKKPRNDATA EMSEDLFEGV KGEDAGDPSV AYGDSTTGNT PRTSLFDKLY IVLISLHGLI RGENMELGRD SDTGGQVKYV VELAKALSSC
201: PGVYRVDLLT RQILAPNFDR GYGELDELLA STSFKNFRCE RGENSGAHII RIPFGPKDKH LAKENIWPFI QEFVDGALGH IVRMSKTIGE ETGSVCPVWP
301: TVIHGHYASA GVAAALLSGA LNVPMLFTGH FLGKDKLEEL LKQGRQTREQ INVTYKIMRR IEAEELSLDA SEIIIASTRQ EIEEQWNLYD GFEVMLARKL
401: RALVKRGANC YGRYMPRMVI IPPGVEFGQL IHDFDMYGDE DNQSPALDPS IWFEIMRFFT NPRKPMILAI ARPYSEKNIA TLVKAFGECH PLRELANLTL
501: IMGNREAISK MNKISAAVLT SVLTLIDEYD LYGQVAYPKL HKHSEVPDIY RLAARTKHSP VQLFLSYVCQ GAFVNVAYFE QFGVTLIEAA MHGLPVIATK
601: NGAPVEIYQV LENGLLVDPH DQHAIADALY KMLSEKQFWS RCRENGLKNI HQFSWPEHCK NYLSRISSLG PRHPAFACKE DHKVPVKCRK HISIIAVDSV
701: NKEDLIQIIR NSVEATRTGT MSGSTGFVLS TSLTIAELQS VIVRTGMLPT DFDAFICNSG SDIYYPLQSS DVPSNSRVTF ALDHNYRSHI EYRWGGEGLR
801: KYLVKWASSV VERRGRTEKQ VIFEDSEHSS TYCLAFRVVN PNHLPPLKEL QKLMRIQSLR CHALYNHGAT RLSVIPMHAS RSQALRYLSI RWGIELPNAV
901: VIVGETGDSD YEELFGGLHK TVILKGGFNT PANRIHTVRR YPLQDVVALD SSNIIGIEGF STGDIRSAMQ QQLGIPTQ
101: AIRLSKHRLE TKKPRNDATA EMSEDLFEGV KGEDAGDPSV AYGDSTTGNT PRTSLFDKLY IVLISLHGLI RGENMELGRD SDTGGQVKYV VELAKALSSC
201: PGVYRVDLLT RQILAPNFDR GYGELDELLA STSFKNFRCE RGENSGAHII RIPFGPKDKH LAKENIWPFI QEFVDGALGH IVRMSKTIGE ETGSVCPVWP
301: TVIHGHYASA GVAAALLSGA LNVPMLFTGH FLGKDKLEEL LKQGRQTREQ INVTYKIMRR IEAEELSLDA SEIIIASTRQ EIEEQWNLYD GFEVMLARKL
401: RALVKRGANC YGRYMPRMVI IPPGVEFGQL IHDFDMYGDE DNQSPALDPS IWFEIMRFFT NPRKPMILAI ARPYSEKNIA TLVKAFGECH PLRELANLTL
501: IMGNREAISK MNKISAAVLT SVLTLIDEYD LYGQVAYPKL HKHSEVPDIY RLAARTKHSP VQLFLSYVCQ GAFVNVAYFE QFGVTLIEAA MHGLPVIATK
601: NGAPVEIYQV LENGLLVDPH DQHAIADALY KMLSEKQFWS RCRENGLKNI HQFSWPEHCK NYLSRISSLG PRHPAFACKE DHKVPVKCRK HISIIAVDSV
701: NKEDLIQIIR NSVEATRTGT MSGSTGFVLS TSLTIAELQS VIVRTGMLPT DFDAFICNSG SDIYYPLQSS DVPSNSRVTF ALDHNYRSHI EYRWGGEGLR
801: KYLVKWASSV VERRGRTEKQ VIFEDSEHSS TYCLAFRVVN PNHLPPLKEL QKLMRIQSLR CHALYNHGAT RLSVIPMHAS RSQALRYLSI RWGIELPNAV
901: VIVGETGDSD YEELFGGLHK TVILKGGFNT PANRIHTVRR YPLQDVVALD SSNIIGIEGF STGDIRSAMQ QQLGIPTQ
0001: MARNDWINSY LEAILDVGTS KKKRFESNSK IVQKLGDINS KDHQEKVFGD MNGKDHQEKV FSPIKYFVEE VVNSFDESDL YKTWIKVIAT RNTRERSNRL
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
0101: ENICWRIWHL ARKKKQIVWD DGVRLSKRRI EREQGRNDAE EDLLSELSEG EKDKNDGEKE KSEVVTTLEP PRDHMPRIRS EMQIWSEDDK SSRNLYIVLI
0201: SMHGLVRGEN MELGRDSDTG GQVKYVVELA RALANTEGVH RVDLLTRQIS SPEVDYSYGE PVEMLSCPPE GSDSCGSYII RIPCGSRDKY IPKESLWPHI
0301: PEFVDGALNH IVSIARSLGE QVNGGKPIWP YVIHGHYADA GEVAAHLAGA LNVPMVLTGH SLGRNKFEQL LQQGRITRED IDRTYKIMRR IEAEEQSLDA
0401: AEMVVTSTRQ EIDAQWGLYD GFDIKLERKL RVRRRRGVSC LGRYMPRMVV IPPGMDFSYV LTQDSQEPDG DLKSLIGPDR NQIKKPVPPI WSEIMRFFSN
0501: PHKPTILALS RPDHKKNVTT LVKAFGECQP LRELANLVLI LGNRDDIEEM PNSSSVVLMN VLKLIDQYDL YGQVAYPKHH KQSEVPDIYR LAAKTKGVFI
0601: NPALVEPFGL TLIEAAAYGL PIVATRNGGP VDIVKALNNG LLVDPHDQQA ISDALLKLVA NKHLWAECRK NGLKNIHRFS WPEHCRNYLS HVEHCRNRHP
0701: TSSLDIMKVP EELTSDSLRD VDDISLRFST EGDFTLNGEL DAGTRQKKLV DAISQMNSMK GCSAAIYSPG RRQMLFVVAV DSYDDNGNIK ANLNEIIKNM
0801: IKAADLTSGK GKIGFVLASG SSLQEVVDIT QKNLINLEDF DAIVCNSGSE IYYPWRDMMV DADYETHVEY KWPGESIRSV ILRLICTEPA AEDDITEYAS
0901: SCSTRCYAIS VKQGVKTRRV DDLRQRLRMR GLRCNIVYTH AATRLNVIPL CASRIQALRY LSIRWGIDMS KTVFFLGEKG DTDYEDLLGG LHKTIILKGV
1001: VGSDSEKLLR SEENFKREDA VPQESPNISY VKENGGSQEI MSTLEAYGIK
Arabidopsis Description
SPS4Probable sucrose-phosphate synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:F4JLK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.